RNA–Protein interactions for RNA: ENST00000545724.2

MDM1-214, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-214ENST00000545724 IQGAP2Q13576 1575 aa12.98□□□□□ -0.33
MDM1-214ENST00000545724 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
MDM1-214ENST00000545724 CEBPAP49715 358 aaPredicted RBP12.96□□□□□ -0.33
MDM1-214ENST00000545724 MLECQ14165 292 aa12.96□□□□□ -0.33
MDM1-214ENST00000545724 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
MDM1-214ENST00000545724 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
MDM1-214ENST00000545724 NEO1Q92859 1461 aa12.94□□□□□ -0.34
MDM1-214ENST00000545724 SLC4A2P04920 1241 aa12.94□□□□□ -0.34
MDM1-214ENST00000545724 PIP4K2BP78356 416 aa12.94□□□□□ -0.34
MDM1-214ENST00000545724 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
MDM1-214ENST00000545724 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
MDM1-214ENST00000545724 ABCA9Q8IUA7 1624 aa12.92□□□□□ -0.34
MDM1-214ENST00000545724 SETD1AO15047 1707 aaKnown RBP12.92□□□□□ -0.34
MDM1-214ENST00000545724 NCOA1Q15788 1441 aa12.92□□□□□ -0.34
MDM1-214ENST00000545724 AKNAQ7Z591 1439 aa12.92□□□□□ -0.34
MDM1-214ENST00000545724 ARHGEF12Q9NZN5 1544 aa12.92□□□□□ -0.34
MDM1-214ENST00000545724 KIAA0556O60303 1618 aa12.89□□□□□ -0.35
MDM1-214ENST00000545724 IGF1RP08069 1367 aa12.88□□□□□ -0.35
MDM1-214ENST00000545724 ZFYVE16Q7Z3T8 1539 aa12.87□□□□□ -0.35
MDM1-214ENST00000545724 EFCAB5A4FU69 1503 aa12.85□□□□□ -0.35
MDM1-214ENST00000545724 ZMYM4Q5VZL5 1548 aa12.85□□□□□ -0.35
MDM1-214ENST00000545724 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
MDM1-214ENST00000545724 UGGT2Q9NYU1 1516 aa12.84□□□□□ -0.35
MDM1-214ENST00000545724 TOM1O60784 492 aa12.84□□□□□ -0.35
MDM1-214ENST00000545724 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
MDM1-214ENST00000545724 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
MDM1-214ENST00000545724 ABCA8O94911 1581 aa12.84□□□□□ -0.35
MDM1-214ENST00000545724 CAMSAP1Q5T5Y3 1602 aa12.83□□□□□ -0.36
MDM1-214ENST00000545724 C3P01024 1663 aa12.81□□□□□ -0.36
MDM1-214ENST00000545724 DSG3P32926 999 aa12.81□□□□□ -0.36
MDM1-214ENST00000545724 ALKQ9UM73 1620 aa12.79□□□□□ -0.36
MDM1-214ENST00000545724 CAPN15O75808 1086 aa12.78□□□□□ -0.36
MDM1-214ENST00000545724 NCKAP5LQ9HCH0 1330 aa12.78□□□□□ -0.36
MDM1-214ENST00000545724 MAGI2Q86UL8 1455 aa12.77□□□□□ -0.37
MDM1-214ENST00000545724 UPF1Q92900 1129 aaKnown RBP eCLIP12.76□□□□□ -0.37
MDM1-214ENST00000545724 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
MDM1-214ENST00000545724 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
MDM1-214ENST00000545724 TRAPPC8Q9Y2L5 1435 aa12.73□□□□□ -0.37
MDM1-214ENST00000545724 C9orf84Q5VXU9 1444 aa12.72□□□□□ -0.37
MDM1-214ENST00000545724 ARID3CA6NKF2 412 aa12.71□□□□□ -0.37
MDM1-214ENST00000545724 ATP10AO60312 1499 aa12.71□□□□□ -0.38
MDM1-214ENST00000545724 ATP10BO94823 1461 aa12.71□□□□□ -0.38
MDM1-214ENST00000545724 PTPRKQ15262 1439 aa12.71□□□□□ -0.38
MDM1-214ENST00000545724 KIF27Q86VH2 1401 aa12.71□□□□□ -0.38
MDM1-214ENST00000545724 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
MDM1-214ENST00000545724 CPS1P31327 1500 aa12.7□□□□□ -0.38
MDM1-214ENST00000545724 TCOF1Q13428 1488 aaKnown RBP12.68□□□□□ -0.38
MDM1-214ENST00000545724 PLA2R1Q13018 1463 aa12.67□□□□□ -0.38
MDM1-214ENST00000545724 PKD2Q13563 968 aa12.67□□□□□ -0.38
MDM1-214ENST00000545724 SUPT6HQ7KZ85 1726 aaKnown RBP12.67□□□□□ -0.38
MDM1-214ENST00000545724 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
MDM1-214ENST00000545724 ZNF142P52746 1687 aaPredicted RBP12.63□□□□□ -0.39
MDM1-214ENST00000545724 SHANK2Q9UPX8 1470 aa12.62□□□□□ -0.39
MDM1-214ENST00000545724 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
MDM1-214ENST00000545724 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
MDM1-214ENST00000545724 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
MDM1-214ENST00000545724 ABCB7O75027 752 aa12.58□□□□□ -0.4
MDM1-214ENST00000545724 NPATQ14207 1427 aa12.58□□□□□ -0.4
MDM1-214ENST00000545724 CEP170BQ9Y4F5 1589 aaPredicted RBP12.56□□□□□ -0.4
MDM1-214ENST00000545724 SCAPERQ9BY12 1400 aa12.56□□□□□ -0.4
MDM1-214ENST00000545724 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
MDM1-214ENST00000545724 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
MDM1-214ENST00000545724 AGLP35573 1532 aa12.55□□□□□ -0.4
MDM1-214ENST00000545724 CTTNBP2Q8WZ74 1663 aa12.54□□□□□ -0.4
MDM1-214ENST00000545724 POLR1AO95602 1720 aaPredicted RBP12.54□□□□□ -0.4
MDM1-214ENST00000545724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.54□□□□□ -0.4
MDM1-214ENST00000545724 VWDEQ8N2E2 1590 aa12.54□□□□□ -0.4
MDM1-214ENST00000545724 NEURL4Q96JN8 1562 aa12.53□□□□□ -0.4
MDM1-214ENST00000545724 REREQ9P2R6 1566 aa12.53□□□□□ -0.4
MDM1-214ENST00000545724 DIP2CQ9Y2E4 1556 aa12.53□□□□□ -0.4
MDM1-214ENST00000545724 MROH2AA6NES4 1674 aa12.53□□□□□ -0.4
MDM1-214ENST00000545724 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.4
MDM1-214ENST00000545724 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
MDM1-214ENST00000545724 CNTLNQ9NXG0 1405 aa12.52□□□□□ -0.41
MDM1-214ENST00000545724 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
MDM1-214ENST00000545724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
MDM1-214ENST00000545724 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
MDM1-214ENST00000545724 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
MDM1-214ENST00000545724 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
MDM1-214ENST00000545724 RAPGEF6Q8TEU7 1601 aa12.48□□□□□ -0.41
MDM1-214ENST00000545724 KDM5CP41229 1560 aa12.47□□□□□ -0.41
MDM1-214ENST00000545724 DNMT1P26358 1616 aaKnown RBP12.46□□□□□ -0.41
MDM1-214ENST00000545724 ZMYM3Q14202 1370 aa12.45□□□□□ -0.42
MDM1-214ENST00000545724 SYNMO15061 1565 aa12.45□□□□□ -0.42
MDM1-214ENST00000545724 ZNF518AQ6AHZ1 1483 aa12.45□□□□□ -0.42
MDM1-214ENST00000545724 RBM33Q96EV2 1170 aaKnown RBP12.44□□□□□ -0.42
MDM1-214ENST00000545724 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
MDM1-214ENST00000545724 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
MDM1-214ENST00000545724 NUP153P49790 1475 aaKnown RBP12.41□□□□□ -0.42
MDM1-214ENST00000545724 FAM9AQ8IZU1 332 aaPredicted RBP12.41□□□□□ -0.42
MDM1-214ENST00000545724 A2ML1A8K2U0 1454 aa12.4□□□□□ -0.42
MDM1-214ENST00000545724 PLCH2O75038 1416 aa12.4□□□□□ -0.42
MDM1-214ENST00000545724 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
MDM1-214ENST00000545724 CLTCQ00610 1675 aaKnown RBP12.39□□□□□ -0.43
MDM1-214ENST00000545724 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
MDM1-214ENST00000545724 PLEKHD1A6NEE1 506 aa12.39□□□□□ -0.43
MDM1-214ENST00000545724 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
MDM1-214ENST00000545724 AFAP1Q8N556 730 aa12.39□□□□□ -0.43
MDM1-214ENST00000545724 CDK12Q9NYV4 1490 aaPredicted RBP12.39□□□□□ -0.43
MDM1-214ENST00000545724 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms