RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
SCAP-215ENST00000545718 EIF4G2P78344 907 aaKnown RBP eCLIP21.87■■□□□ 1.09
SCAP-215ENST00000545718 DAPK1P53355 1430 aa21.86■■□□□ 1.09
SCAP-215ENST00000545718 DENND4BO75064 1496 aaPredicted RBP21.86■■□□□ 1.09
SCAP-215ENST00000545718 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.09
SCAP-215ENST00000545718 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.09
SCAP-215ENST00000545718 ABCC5O15440 1437 aa21.83■■□□□ 1.09
SCAP-215ENST00000545718 JPH4Q96JJ6 628 aa21.83■■□□□ 1.08
SCAP-215ENST00000545718 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
SCAP-215ENST00000545718 AKNAQ7Z591 1439 aa21.82■■□□□ 1.08
SCAP-215ENST00000545718 KDM5BQ9UGL1 1544 aa21.81■■□□□ 1.08
SCAP-215ENST00000545718 RAPGEF6Q8TEU7 1601 aa21.81■■□□□ 1.08
SCAP-215ENST00000545718 NEFLP07196 543 aa21.81■■□□□ 1.08
SCAP-215ENST00000545718 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
SCAP-215ENST00000545718 CNGB1Q14028 1251 aaPredicted RBP21.77■■□□□ 1.08
SCAP-215ENST00000545718 HNRNPUQ00839 825 aaKnown RBP eCLIP21.77■■□□□ 1.08
SCAP-215ENST00000545718 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
SCAP-215ENST00000545718 TROQ12816 1431 aaPredicted RBP21.75■■□□□ 1.07
SCAP-215ENST00000545718 ROCK1Q13464 1354 aa21.75■■□□□ 1.07
SCAP-215ENST00000545718 CARMIL2Q6F5E8 1435 aa21.74■■□□□ 1.07
SCAP-215ENST00000545718 POLR3GLQ9BT43 218 aa21.74■■□□□ 1.07
SCAP-215ENST00000545718 SYNJ2O15056 1496 aa21.73■■□□□ 1.07
SCAP-215ENST00000545718 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
SCAP-215ENST00000545718 ANKRD30BQ9BXX2 1392 aa21.73■■□□□ 1.07
SCAP-215ENST00000545718 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
SCAP-215ENST00000545718 CEP170Q5SW79 1584 aa21.73■■□□□ 1.07
SCAP-215ENST00000545718 C11orf95C9JLR9 678 aaPredicted RBP21.72■■□□□ 1.07
SCAP-215ENST00000545718 DNMT1P26358 1616 aaKnown RBP21.71■■□□□ 1.07
SCAP-215ENST00000545718 CAMSAP2Q08AD1 1489 aa21.7■■□□□ 1.06
SCAP-215ENST00000545718 PKD2Q13563 968 aa21.67■■□□□ 1.06
SCAP-215ENST00000545718 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
SCAP-215ENST00000545718 RPRD2Q5VT52 1461 aaKnown RBP21.66■■□□□ 1.06
SCAP-215ENST00000545718 KIF14Q15058 1648 aa21.66■■□□□ 1.06
SCAP-215ENST00000545718 TSHZ2Q9NRE2 1034 aa21.65■■□□□ 1.06
SCAP-215ENST00000545718 NCOA1Q15788 1441 aa21.65■■□□□ 1.06
SCAP-215ENST00000545718 CCDC184Q52MB2 194 aa21.64■■□□□ 1.05
SCAP-215ENST00000545718 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.05
SCAP-215ENST00000545718 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
SCAP-215ENST00000545718 ANKRD30AQ9BXX3 1397 aa21.61■■□□□ 1.05
SCAP-215ENST00000545718 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
SCAP-215ENST00000545718 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
SCAP-215ENST00000545718 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
SCAP-215ENST00000545718 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
SCAP-215ENST00000545718 HNRNPMP52272 730 aaKnown RBP eCLIP21.6■■□□□ 1.051e-6■■■■□ 26
SCAP-215ENST00000545718 MRS2Q9HD23 443 aa21.59■■□□□ 1.05
SCAP-215ENST00000545718 NUP160Q12769 1436 aa21.58■■□□□ 1.05
SCAP-215ENST00000545718 PZPP20742 1482 aa21.58■■□□□ 1.05
SCAP-215ENST00000545718 TEX14Q8IWB6 1497 aa21.58■■□□□ 1.05
SCAP-215ENST00000545718 KIF7Q2M1P5 1343 aa21.57■■□□□ 1.04
SCAP-215ENST00000545718 NUP155O75694 1391 aa21.57■■□□□ 1.04
SCAP-215ENST00000545718 PRKRIP1Q9H875 184 aaPredicted RBP21.57■■□□□ 1.04
SCAP-215ENST00000545718 ANKRD50Q9ULJ7 1429 aa21.56■■□□□ 1.04
SCAP-215ENST00000545718 KDM2AQ9Y2K7 1162 aa21.56■■□□□ 1.04
SCAP-215ENST00000545718 ITSN2Q9NZM3 1697 aa21.55■■□□□ 1.04
SCAP-215ENST00000545718 ATP10BO94823 1461 aa21.54■■□□□ 1.04
SCAP-215ENST00000545718 KIAA1107Q9UPP5 1409 aa21.53■■□□□ 1.04
SCAP-215ENST00000545718 PTPRGP23470 1445 aa21.51■■□□□ 1.03
SCAP-215ENST00000545718 C9orf84Q5VXU9 1444 aa21.5■■□□□ 1.03
SCAP-215ENST00000545718 USP47Q96K76 1375 aa21.47■■□□□ 1.03
SCAP-215ENST00000545718 SENP3-EIF4A1A0A087X0R7 540 aa21.46■■□□□ 1.03
SCAP-215ENST00000545718 ADGRL2O95490 1459 aa21.45■■□□□ 1.02
SCAP-215ENST00000545718 ADGBQ8N7X0 1667 aa21.45■■□□□ 1.02
SCAP-215ENST00000545718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.45■■□□□ 1.02
SCAP-215ENST00000545718 CARD11Q9BXL7 1154 aa21.45■■□□□ 1.02
SCAP-215ENST00000545718 KIF15Q9NS87 1388 aa21.45■■□□□ 1.02
SCAP-215ENST00000545718 SPATA31E1Q6ZUB1 1445 aa21.44■■□□□ 1.02
SCAP-215ENST00000545718 ABCA8O94911 1581 aa21.44■■□□□ 1.02
SCAP-215ENST00000545718 ADCY10Q96PN6 1610 aa21.44■■□□□ 1.02
SCAP-215ENST00000545718 DCAF11Q8TEB1 546 aa21.43■■□□□ 1.02
SCAP-215ENST00000545718 ABCC10Q5T3U5 1492 aa21.42■■□□□ 1.02
SCAP-215ENST00000545718 CDC42BPAQ5VT25 1732 aa21.42■■□□□ 1.02
SCAP-215ENST00000545718 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
SCAP-215ENST00000545718 CROCC2H7BZ55 1655 aa21.39■■□□□ 1.01
SCAP-215ENST00000545718 ST20-MTHFSA0A0A6YYL1 179 aa21.35■■□□□ 1.01
SCAP-215ENST00000545718 MBD5Q9P267 1494 aa21.33■■□□□ 1
SCAP-215ENST00000545718 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
SCAP-215ENST00000545718 RBM19Q9Y4C8 960 aaKnown RBP21.3■■□□□ 1
SCAP-215ENST00000545718 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
SCAP-215ENST00000545718 CCDC141Q6ZP82 1450 aa21.29■■□□□ 1
SCAP-215ENST00000545718 BCORL1Q5H9F3 1711 aa21.27■■□□□ 1
SCAP-215ENST00000545718 TMC1Q8TDI8 760 aa21.27■■□□□ 1
SCAP-215ENST00000545718 ARHGAP5Q13017 1502 aa21.27■■□□□ 1
SCAP-215ENST00000545718 ROCK2O75116 1388 aaKnown RBP21.27■■□□□ 1
SCAP-215ENST00000545718 DHX29Q7Z478 1369 aaKnown RBP21.27■■□□□ 1
SCAP-215ENST00000545718 MYT1Q01538 1121 aa21.27■□□□□ 0.99
SCAP-215ENST00000545718 RSPH4AQ5TD94 716 aa21.25■□□□□ 0.99
SCAP-215ENST00000545718 SAMD9LQ8IVG5 1584 aa21.25■□□□□ 0.99
SCAP-215ENST00000545718 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
SCAP-215ENST00000545718 CCDC144AA2RUR9 1427 aa21.23■□□□□ 0.99
SCAP-215ENST00000545718 RALGAPBQ86X10 1494 aa21.22■□□□□ 0.99
SCAP-215ENST00000545718 KDM5CP41229 1560 aa21.22■□□□□ 0.99
SCAP-215ENST00000545718 B4GALNT3Q6L9W6 998 aa21.22■□□□□ 0.99
SCAP-215ENST00000545718 NBPF1Q3BBV0 1214 aa21.21■□□□□ 0.99
SCAP-215ENST00000545718 CHD1O14646 1710 aa21.21■□□□□ 0.99
SCAP-215ENST00000545718 UHRF1BP1Q6BDS2 1440 aa21.21■□□□□ 0.99
SCAP-215ENST00000545718 CDC42BPBQ9Y5S2 1711 aa21.2■□□□□ 0.99
SCAP-215ENST00000545718 FAM135AQ9P2D6 1515 aa21.2■□□□□ 0.98
SCAP-215ENST00000545718 ARHGEF5Q12774 1597 aa21.2■□□□□ 0.98
SCAP-215ENST00000545718 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
SCAP-215ENST00000545718 POLR1AO95602 1720 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms