RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 MLECQ14165 292 aa19.37■□□□□ 0.69
TMEM258-208ENST00000545210 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
TMEM258-208ENST00000545210 SCAPERQ9BY12 1400 aa19.34■□□□□ 0.69
TMEM258-208ENST00000545210 CERKQ8TCT0 537 aa19.32■□□□□ 0.68
TMEM258-208ENST00000545210 PLCH2O75038 1416 aa19.32■□□□□ 0.68
TMEM258-208ENST00000545210 ARHGEF12Q9NZN5 1544 aa19.31■□□□□ 0.68
TMEM258-208ENST00000545210 ATP10AO60312 1499 aa19.3■□□□□ 0.68
TMEM258-208ENST00000545210 STRCQ7RTU9 1775 aa19.29■□□□□ 0.68
TMEM258-208ENST00000545210 KIF14Q15058 1648 aa19.28■□□□□ 0.68
TMEM258-208ENST00000545210 C9orf84Q5VXU9 1444 aa19.27■□□□□ 0.68
TMEM258-208ENST00000545210 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
TMEM258-208ENST00000545210 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
TMEM258-208ENST00000545210 CEBPAP49715 358 aaPredicted RBP19.24■□□□□ 0.67
TMEM258-208ENST00000545210 EFCAB2Q5VUJ9 269 aa19.23■□□□□ 0.67
TMEM258-208ENST00000545210 SETD1BQ9UPS6 1966 aaKnown RBP19.22■□□□□ 0.67
TMEM258-208ENST00000545210 ZNF518AQ6AHZ1 1483 aa19.22■□□□□ 0.67
TMEM258-208ENST00000545210 KDM5CP41229 1560 aa19.21■□□□□ 0.67
TMEM258-208ENST00000545210 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
TMEM258-208ENST00000545210 CDC42BPBQ9Y5S2 1711 aa19.2■□□□□ 0.66
TMEM258-208ENST00000545210 FMN1Q68DA7 1419 aa19.2■□□□□ 0.66
TMEM258-208ENST00000545210 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
TMEM258-208ENST00000545210 C3P01024 1663 aa19.2■□□□□ 0.66
TMEM258-208ENST00000545210 DIP2CQ9Y2E4 1556 aa19.19■□□□□ 0.66
TMEM258-208ENST00000545210 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
TMEM258-208ENST00000545210 AFAP1Q8N556 730 aa19.17■□□□□ 0.66
TMEM258-208ENST00000545210 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
TMEM258-208ENST00000545210 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
TMEM258-208ENST00000545210 UHRF1BP1Q6BDS2 1440 aa19.16■□□□□ 0.66
TMEM258-208ENST00000545210 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
TMEM258-208ENST00000545210 MYT1LQ9UL68 1186 aa19.15■□□□□ 0.66
TMEM258-208ENST00000545210 TROQ12816 1431 aaPredicted RBP19.15■□□□□ 0.66
TMEM258-208ENST00000545210 REREQ9P2R6 1566 aa19.15■□□□□ 0.66
TMEM258-208ENST00000545210 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
TMEM258-208ENST00000545210 ITSN2Q9NZM3 1697 aa19.12■□□□□ 0.65
TMEM258-208ENST00000545210 PREX2Q70Z35 1606 aa19.12■□□□□ 0.65
TMEM258-208ENST00000545210 CLIP1P30622 1438 aa19.12■□□□□ 0.65
TMEM258-208ENST00000545210 DISP3Q9P2K9 1392 aa19.11■□□□□ 0.65
TMEM258-208ENST00000545210 ABCC1P33527 1531 aa19.09■□□□□ 0.65
TMEM258-208ENST00000545210 MLH3Q9UHC1 1453 aa19.09■□□□□ 0.65
TMEM258-208ENST00000545210 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
TMEM258-208ENST00000545210 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.65
TMEM258-208ENST00000545210 ILDR2Q71H61 639 aa19.08■□□□□ 0.64
TMEM258-208ENST00000545210 AGLP35573 1532 aa19.06■□□□□ 0.64
TMEM258-208ENST00000545210 PTPRTO14522 1441 aa19.06■□□□□ 0.64
TMEM258-208ENST00000545210 TRAPPC8Q9Y2L5 1435 aa19.06■□□□□ 0.64
TMEM258-208ENST00000545210 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
TMEM258-208ENST00000545210 SPATA31D1Q6ZQQ2 1576 aa19.03■□□□□ 0.64
TMEM258-208ENST00000545210 LTBP4Q8N2S1 1624 aa19.03■□□□□ 0.64
TMEM258-208ENST00000545210 MROH2AA6NES4 1674 aa19.01■□□□□ 0.63
TMEM258-208ENST00000545210 SUPT6HQ7KZ85 1726 aaKnown RBP19.01■□□□□ 0.63
TMEM258-208ENST00000545210 SOCS7O14512 581 aa19■□□□□ 0.63
TMEM258-208ENST00000545210 CCDC18Q5T9S5 1454 aa18.99■□□□□ 0.63
TMEM258-208ENST00000545210 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
TMEM258-208ENST00000545210 CAMSAP1Q5T5Y3 1602 aa18.98■□□□□ 0.63
TMEM258-208ENST00000545210 CNTLNQ9NXG0 1405 aa18.98■□□□□ 0.63
TMEM258-208ENST00000545210 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
TMEM258-208ENST00000545210 CLTCQ00610 1675 aaKnown RBP18.96■□□□□ 0.63
TMEM258-208ENST00000545210 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.63
TMEM258-208ENST00000545210 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
TMEM258-208ENST00000545210 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
TMEM258-208ENST00000545210 NPATQ14207 1427 aa18.92■□□□□ 0.62
TMEM258-208ENST00000545210 ZNF142P52746 1687 aaPredicted RBP18.92■□□□□ 0.62
TMEM258-208ENST00000545210 ZNF777Q9ULD5 760 aaPredicted RBP18.92■□□□□ 0.62
TMEM258-208ENST00000545210 MYO3AQ8NEV4 1616 aa18.92■□□□□ 0.62
TMEM258-208ENST00000545210 ZMYM3Q14202 1370 aa18.9■□□□□ 0.62
TMEM258-208ENST00000545210 FYCO1Q9BQS8 1478 aa18.89■□□□□ 0.61
TMEM258-208ENST00000545210 ATP7AQ04656 1500 aa18.89■□□□□ 0.61
TMEM258-208ENST00000545210 INO80Q9ULG1 1556 aaPredicted RBP18.89■□□□□ 0.61
TMEM258-208ENST00000545210 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
TMEM258-208ENST00000545210 PLXNC1O60486 1568 aa18.88■□□□□ 0.61
TMEM258-208ENST00000545210 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
TMEM258-208ENST00000545210 HNRNPMP52272 730 aaKnown RBP eCLIP18.87■□□□□ 0.61
TMEM258-208ENST00000545210 GPATCH8Q9UKJ3 1502 aaKnown RBP18.87■□□□□ 0.61
TMEM258-208ENST00000545210 CEP170BQ9Y4F5 1589 aaPredicted RBP18.85■□□□□ 0.61
TMEM258-208ENST00000545210 ZNF335Q9H4Z2 1342 aaPredicted RBP18.85■□□□□ 0.61
TMEM258-208ENST00000545210 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
TMEM258-208ENST00000545210 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
TMEM258-208ENST00000545210 A2MP01023 1474 aa18.83■□□□□ 0.6
TMEM258-208ENST00000545210 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
TMEM258-208ENST00000545210 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
TMEM258-208ENST00000545210 PTPRKQ15262 1439 aa18.81■□□□□ 0.6
TMEM258-208ENST00000545210 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
TMEM258-208ENST00000545210 PLEKHH2Q8IVE3 1493 aa18.8■□□□□ 0.6
TMEM258-208ENST00000545210 KIAA1107Q9UPP5 1409 aa18.8■□□□□ 0.6
TMEM258-208ENST00000545210 PKD2Q13563 968 aa18.79■□□□□ 0.6
TMEM258-208ENST00000545210 GGT6Q6P531 493 aa18.79■□□□□ 0.6
TMEM258-208ENST00000545210 CFDP1Q9UEE9 299 aaPredicted RBP18.79■□□□□ 0.6
TMEM258-208ENST00000545210 POLR1AO95602 1720 aaPredicted RBP18.79■□□□□ 0.6
TMEM258-208ENST00000545210 DNMT1P26358 1616 aaKnown RBP18.77■□□□□ 0.6
TMEM258-208ENST00000545210 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.6
TMEM258-208ENST00000545210 TIAM1Q13009 1591 aa18.73■□□□□ 0.59
TMEM258-208ENST00000545210 A2ML1A8K2U0 1454 aa18.72■□□□□ 0.59
TMEM258-208ENST00000545210 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
TMEM258-208ENST00000545210 MTUS2Q5JR59 1369 aa18.71■□□□□ 0.59
TMEM258-208ENST00000545210 ZNF644Q9H582 1327 aaPredicted RBP18.71■□□□□ 0.59
TMEM258-208ENST00000545210 NEURL4Q96JN8 1562 aa18.69■□□□□ 0.58
TMEM258-208ENST00000545210 MBD5Q9P267 1494 aa18.68■□□□□ 0.58
TMEM258-208ENST00000545210 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
TMEM258-208ENST00000545210 MED1Q15648 1581 aaPredicted RBP18.67■□□□□ 0.58
TMEM258-208ENST00000545210 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms