RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 CARD11Q9BXL7 1154 aa10.33□□□□□ -0.76
ABCA13-207ENST00000544596 SUPT16HQ9Y5B9 1047 aaKnown RBP10.33□□□□□ -0.76
ABCA13-207ENST00000544596 MARCH6O60337 910 aa10.32□□□□□ -0.76
ABCA13-207ENST00000544596 PLEKHD1A6NEE1 506 aa10.32□□□□□ -0.76
ABCA13-207ENST00000544596 TAF7LQ5H9L4 462 aa10.32□□□□□ -0.76
ABCA13-207ENST00000544596 SRPK2P78362 688 aaKnown RBP10.31□□□□□ -0.76
ABCA13-207ENST00000544596 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
ABCA13-207ENST00000544596 MIER1Q8N108 512 aa10.3□□□□□ -0.76
ABCA13-207ENST00000544596 FRAT2O75474 233 aaPredicted RBP10.3□□□□□ -0.76
ABCA13-207ENST00000544596 MS4A1P11836 297 aa10.3□□□□□ -0.76
ABCA13-207ENST00000544596 GOLGA6L1Q8N7Z2 621 aa10.3□□□□□ -0.76
ABCA13-207ENST00000544596 TOMM22Q9NS69 142 aa10.29□□□□□ -0.76
ABCA13-207ENST00000544596 PES1O00541 588 aaKnown RBP10.28□□□□□ -0.76
ABCA13-207ENST00000544596 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.76
ABCA13-207ENST00000544596 TPM4P67936 248 aa10.27□□□□□ -0.76
ABCA13-207ENST00000544596 MSH5O43196 834 aa10.27□□□□□ -0.77
ABCA13-207ENST00000544596 CCDC180Q9P1Z9 1646 aa10.26□□□□□ -0.77
ABCA13-207ENST00000544596 RAD21O60216 631 aa10.26□□□□□ -0.77
ABCA13-207ENST00000544596 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
ABCA13-207ENST00000544596 GZF1Q9H116 711 aaPredicted RBP10.25□□□□□ -0.77
ABCA13-207ENST00000544596 STK26Q9P289 416 aa10.25□□□□□ -0.77
ABCA13-207ENST00000544596 HTATSF1O43719 755 aaKnown RBP10.24□□□□□ -0.77
ABCA13-207ENST00000544596 NOP58Q9Y2X3 529 aaKnown RBP10.24□□□□□ -0.77
ABCA13-207ENST00000544596 CCDC34Q96HJ3 373 aa10.24□□□□□ -0.77
ABCA13-207ENST00000544596 HDGFP51858 240 aaKnown RBP10.23□□□□□ -0.77
ABCA13-207ENST00000544596 TCEAL9Q9UHQ7 104 aa10.23□□□□□ -0.77
ABCA13-207ENST00000544596 TPM3P06753 285 aa10.23□□□□□ -0.77
ABCA13-207ENST00000544596 NOL8Q76FK4 1167 aaKnown RBP10.23□□□□□ -0.77
ABCA13-207ENST00000544596 KLHL34Q8N239 644 aa10.22□□□□□ -0.77
ABCA13-207ENST00000544596 CFDP1Q9UEE9 299 aaPredicted RBP10.22□□□□□ -0.77
ABCA13-207ENST00000544596 MORC1Q86VD1 984 aa10.22□□□□□ -0.77
ABCA13-207ENST00000544596 CTDP1Q9Y5B0 961 aaPredicted RBP10.21□□□□□ -0.77
ABCA13-207ENST00000544596 TRIM6-TRIM34B2RNG4 842 aa10.21□□□□□ -0.77
ABCA13-207ENST00000544596 CWC22Q9HCG8 908 aaKnown RBP10.21□□□□□ -0.78
ABCA13-207ENST00000544596 TPD52L1Q16890 204 aaPredicted RBP10.2□□□□□ -0.78
ABCA13-207ENST00000544596 CCAR2Q8N163 923 aaKnown RBP10.18□□□□□ -0.78
ABCA13-207ENST00000544596 GPATCH3Q96I76 525 aa10.18□□□□□ -0.78
ABCA13-207ENST00000544596 ITPRIPQ8IWB1 547 aa10.18□□□□□ -0.78
ABCA13-207ENST00000544596 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
ABCA13-207ENST00000544596 SF3A1Q15459 793 aaKnown RBP10.17□□□□□ -0.78
ABCA13-207ENST00000544596 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
ABCA13-207ENST00000544596 GBP4Q96PP9 640 aa10.17□□□□□ -0.78
ABCA13-207ENST00000544596 TRIM34Q9BYJ4 488 aa10.17□□□□□ -0.78
ABCA13-207ENST00000544596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.17□□□□□ -0.782e-6■■■■■ 96.1
ABCA13-207ENST00000544596 PPP4R2Q9NY27 417 aa10.17□□□□□ -0.78
ABCA13-207ENST00000544596 SLKQ9H2G2 1235 aaPredicted RBP10.17□□□□□ -0.78
ABCA13-207ENST00000544596 SLC4A10Q6U841 1118 aa10.17□□□□□ -0.78
ABCA13-207ENST00000544596 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
ABCA13-207ENST00000544596 SYAP1Q96A49 352 aaPredicted RBP10.16□□□□□ -0.78
ABCA13-207ENST00000544596 TMF1P82094 1093 aa10.16□□□□□ -0.78
ABCA13-207ENST00000544596 FOXD4L5Q5VV16 416 aaPredicted RBP10.16□□□□□ -0.78
ABCA13-207ENST00000544596 FOXD4L4Q8WXT5 416 aaPredicted RBP10.16□□□□□ -0.78
ABCA13-207ENST00000544596 FBXW7Q969H0 707 aa10.16□□□□□ -0.78
ABCA13-207ENST00000544596 SETQ01105 290 aaPredicted RBP10.15□□□□□ -0.78
ABCA13-207ENST00000544596 PHF23Q9BUL5 403 aaPredicted RBP10.15□□□□□ -0.78
ABCA13-207ENST00000544596 HDGFL2Q7Z4V5 671 aaPredicted RBP10.15□□□□□ -0.78
ABCA13-207ENST00000544596 TSR1Q2NL82 804 aaKnown RBP10.15□□□□□ -0.78
ABCA13-207ENST00000544596 STK31Q9BXU1 1019 aa10.15□□□□□ -0.78
ABCA13-207ENST00000544596 IPO8O15397 1037 aaKnown RBP10.15□□□□□ -0.79
ABCA13-207ENST00000544596 GGT6Q6P531 493 aa10.15□□□□□ -0.79
ABCA13-207ENST00000544596 LTV1Q96GA3 475 aaPredicted RBP10.15□□□□□ -0.79
ABCA13-207ENST00000544596 USP35Q9P2H5 1018 aa10.15□□□□□ -0.79
ABCA13-207ENST00000544596 CALRP27797 417 aaKnown RBP10.14□□□□□ -0.79
ABCA13-207ENST00000544596 DCAF11Q8TEB1 546 aa10.14□□□□□ -0.79
ABCA13-207ENST00000544596 U2AF1L5P0DN76 240 aaPredicted RBP10.13□□□□□ -0.79
ABCA13-207ENST00000544596 U2AF1Q01081 240 aaKnown RBP eCLIP10.13□□□□□ -0.79
ABCA13-207ENST00000544596 PCMTD1Q96MG8 357 aaPredicted RBP10.13□□□□□ -0.79
ABCA13-207ENST00000544596 MFAP1P55081 439 aaKnown RBP10.12□□□□□ -0.79
ABCA13-207ENST00000544596 AKAP17AQ02040 695 aaKnown RBP10.12□□□□□ -0.79
ABCA13-207ENST00000544596 DHX16O60231 1041 aaKnown RBP10.12□□□□□ -0.79
ABCA13-207ENST00000544596 RRP12Q5JTH9 1297 aaKnown RBP10.12□□□□□ -0.79
ABCA13-207ENST00000544596 SPAG9O60271 1321 aaKnown RBP10.12□□□□□ -0.79
ABCA13-207ENST00000544596 TPM2P07951 284 aa10.11□□□□□ -0.79
ABCA13-207ENST00000544596 PAF1Q8N7H5 531 aa10.11□□□□□ -0.79
ABCA13-207ENST00000544596 NUTM2FA1L443 756 aa10.1□□□□□ -0.79
ABCA13-207ENST00000544596 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
ABCA13-207ENST00000544596 KANK1Q14678 1352 aa10.1□□□□□ -0.79
ABCA13-207ENST00000544596 H3BQV1 296 aa10.1□□□□□ -0.79
ABCA13-207ENST00000544596 CSPP1Q1MSJ5 1256 aa10.1□□□□□ -0.79
ABCA13-207ENST00000544596 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
ABCA13-207ENST00000544596 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 CCDC43Q96MW1 224 aaKnown RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 KIF16BQ96L93 1317 aa10.09□□□□□ -0.79
ABCA13-207ENST00000544596 FOXD4L6Q3SYB3 417 aaPredicted RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 FOXD4L3Q6VB84 417 aaPredicted RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 DEKP35659 375 aaKnown RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 MEX3CQ5U5Q3 659 aaKnown RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 RSF1Q96T23 1441 aaPredicted RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 PTMSP20962 102 aa10.09□□□□□ -0.79
ABCA13-207ENST00000544596 CALD1Q05682 793 aaKnown RBP10.09□□□□□ -0.79
ABCA13-207ENST00000544596 EVA1CP58658 441 aa10.08□□□□□ -0.8
ABCA13-207ENST00000544596 AEBP2Q6ZN18 517 aaPredicted RBP10.08□□□□□ -0.8
ABCA13-207ENST00000544596 NGEFQ8N5V2 710 aa10.08□□□□□ -0.8
ABCA13-207ENST00000544596 AMOTL1Q8IY63 956 aa10.08□□□□□ -0.8
ABCA13-207ENST00000544596 NGDNQ8NEJ9 315 aaKnown RBP10.08□□□□□ -0.8
ABCA13-207ENST00000544596 CCDC70Q6NSX1 233 aa10.07□□□□□ -0.8
ABCA13-207ENST00000544596 TPM1P09493 284 aa10.07□□□□□ -0.8
ABCA13-207ENST00000544596 FAM184AQ8NB25 1140 aa10.07□□□□□ -0.8
ABCA13-207ENST00000544596 RWDD1Q9H446 243 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms