RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 ROCK1Q13464 1354 aa11.4□□□□□ -0.58
TRIM59-208ENST00000543469 KDM5BQ9UGL1 1544 aa11.4□□□□□ -0.59
TRIM59-208ENST00000543469 TONSLQ96HA7 1378 aa11.38□□□□□ -0.59
TRIM59-208ENST00000543469 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
TRIM59-208ENST00000543469 AKNAQ7Z591 1439 aa11.38□□□□□ -0.59
TRIM59-208ENST00000543469 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
TRIM59-208ENST00000543469 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
TRIM59-208ENST00000543469 FAM69CQ0P6D2 419 aa11.37□□□□□ -0.59
TRIM59-208ENST00000543469 ASXL2Q76L83 1435 aa11.37□□□□□ -0.59
TRIM59-208ENST00000543469 CCDC141Q6ZP82 1450 aa11.37□□□□□ -0.59
TRIM59-208ENST00000543469 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
TRIM59-208ENST00000543469 KIAA1107Q9UPP5 1409 aa11.37□□□□□ -0.59
TRIM59-208ENST00000543469 CD109Q6YHK3 1445 aa11.36□□□□□ -0.59
TRIM59-208ENST00000543469 PLCH2O75038 1416 aa11.36□□□□□ -0.59
TRIM59-208ENST00000543469 TCOF1Q13428 1488 aaKnown RBP11.36□□□□□ -0.59
TRIM59-208ENST00000543469 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
TRIM59-208ENST00000543469 CAMSAP2Q08AD1 1489 aa11.34□□□□□ -0.59
TRIM59-208ENST00000543469 ARAP3Q8WWN8 1544 aa11.33□□□□□ -0.6
TRIM59-208ENST00000543469 DAPK1P53355 1430 aa11.33□□□□□ -0.6
TRIM59-208ENST00000543469 SHANK2Q9UPX8 1470 aa11.33□□□□□ -0.6
TRIM59-208ENST00000543469 GPATCH8Q9UKJ3 1502 aaKnown RBP11.33□□□□□ -0.6
TRIM59-208ENST00000543469 HNRNPMP52272 730 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRIM59-208ENST00000543469 ADCY10Q96PN6 1610 aa11.32□□□□□ -0.6
TRIM59-208ENST00000543469 C9orf84Q5VXU9 1444 aa11.32□□□□□ -0.6
TRIM59-208ENST00000543469 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
TRIM59-208ENST00000543469 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
TRIM59-208ENST00000543469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■■■■□ 20.8
TRIM59-208ENST00000543469 NEO1Q92859 1461 aa11.3□□□□□ -0.6
TRIM59-208ENST00000543469 KIF15Q9NS87 1388 aa11.3□□□□□ -0.6
TRIM59-208ENST00000543469 FANCAO15360 1455 aa11.3□□□□□ -0.6
TRIM59-208ENST00000543469 ADGRL1O94910 1474 aa11.3□□□□□ -0.6
TRIM59-208ENST00000543469 ZCCHC11Q5TAX3 1644 aaKnown RBP11.29□□□□□ -0.6
TRIM59-208ENST00000543469 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
TRIM59-208ENST00000543469 DENND4BO75064 1496 aaPredicted RBP11.29□□□□□ -0.6
TRIM59-208ENST00000543469 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
TRIM59-208ENST00000543469 SCAPERQ9BY12 1400 aa11.28□□□□□ -0.6
TRIM59-208ENST00000543469 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
TRIM59-208ENST00000543469 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
TRIM59-208ENST00000543469 ANKRD50Q9ULJ7 1429 aa11.28□□□□□ -0.6
TRIM59-208ENST00000543469 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
TRIM59-208ENST00000543469 RTEL1-TNFRSF6BF6WH68 1400 aa11.27□□□□□ -0.6
TRIM59-208ENST00000543469 PPP6R1Q9UPN7 881 aa11.27□□□□□ -0.6
TRIM59-208ENST00000543469 ARID4BQ4LE39 1312 aaPredicted RBP11.27□□□□□ -0.61
TRIM59-208ENST00000543469 NUP155O75694 1391 aa11.27□□□□□ -0.61
TRIM59-208ENST00000543469 POGZQ7Z3K3 1410 aa11.27□□□□□ -0.61
TRIM59-208ENST00000543469 MYO5CQ9NQX4 1742 aa11.27□□□□□ -0.61
TRIM59-208ENST00000543469 ZNF518AQ6AHZ1 1483 aa11.26□□□□□ -0.61
TRIM59-208ENST00000543469 ARHGEF5Q12774 1597 aa11.26□□□□□ -0.61
TRIM59-208ENST00000543469 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
TRIM59-208ENST00000543469 MAPKBP1O60336 1514 aa11.25□□□□□ -0.61
TRIM59-208ENST00000543469 ABCC5O15440 1437 aa11.24□□□□□ -0.61
TRIM59-208ENST00000543469 DNMT1P26358 1616 aaKnown RBP11.23□□□□□ -0.61
TRIM59-208ENST00000543469 MPHOSPH9Q99550 1183 aa11.23□□□□□ -0.61
TRIM59-208ENST00000543469 DUOX2Q9NRD8 1548 aa11.23□□□□□ -0.61
TRIM59-208ENST00000543469 KIF3BO15066 747 aa11.22□□□□□ -0.61
TRIM59-208ENST00000543469 PREX2Q70Z35 1606 aa11.22□□□□□ -0.61
TRIM59-208ENST00000543469 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
TRIM59-208ENST00000543469 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
TRIM59-208ENST00000543469 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
TRIM59-208ENST00000543469 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
TRIM59-208ENST00000543469 ADGRL2O95490 1459 aa11.21□□□□□ -0.61
TRIM59-208ENST00000543469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRIM59-208ENST00000543469 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
TRIM59-208ENST00000543469 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
TRIM59-208ENST00000543469 PKD2Q13563 968 aa11.19□□□□□ -0.62
TRIM59-208ENST00000543469 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
TRIM59-208ENST00000543469 ADGBQ8N7X0 1667 aa11.18□□□□□ -0.62
TRIM59-208ENST00000543469 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
TRIM59-208ENST00000543469 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
TRIM59-208ENST00000543469 GLI2P10070 1586 aa11.18□□□□□ -0.62
TRIM59-208ENST00000543469 MAGI2Q86UL8 1455 aa11.18□□□□□ -0.62
TRIM59-208ENST00000543469 NAIPQ13075 1403 aa11.18□□□□□ -0.62
TRIM59-208ENST00000543469 ABCA9Q8IUA7 1624 aa11.17□□□□□ -0.62
TRIM59-208ENST00000543469 SYCP2Q9BX26 1530 aa11.17□□□□□ -0.62
TRIM59-208ENST00000543469 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
TRIM59-208ENST00000543469 DHX57Q6P158 1386 aaKnown RBP11.17□□□□□ -0.62
TRIM59-208ENST00000543469 CCDC144AA2RUR9 1427 aa11.16□□□□□ -0.62
TRIM59-208ENST00000543469 DHX29Q7Z478 1369 aaKnown RBP11.16□□□□□ -0.62
TRIM59-208ENST00000543469 GGT6Q6P531 493 aa11.16□□□□□ -0.62
TRIM59-208ENST00000543469 ZNF326Q5BKZ1 582 aaKnown RBP11.16□□□□□ -0.62
TRIM59-208ENST00000543469 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.63
TRIM59-208ENST00000543469 CDCA8Q53HL2 280 aa11.15□□□□□ -0.63
TRIM59-208ENST00000543469 MAST1Q9Y2H9 1570 aa11.14□□□□□ -0.63
TRIM59-208ENST00000543469 AFAP1Q8N556 730 aa11.14□□□□□ -0.63
TRIM59-208ENST00000543469 ABCC1P33527 1531 aa11.13□□□□□ -0.63
TRIM59-208ENST00000543469 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
TRIM59-208ENST00000543469 PPP1R15AO75807 674 aaPredicted RBP11.13□□□□□ -0.63
TRIM59-208ENST00000543469 BCANQ96GW7 911 aa11.12□□□□□ -0.63
TRIM59-208ENST00000543469 A2MP01023 1474 aa11.12□□□□□ -0.63
TRIM59-208ENST00000543469 ATP7AQ04656 1500 aa11.11□□□□□ -0.63
TRIM59-208ENST00000543469 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
TRIM59-208ENST00000543469 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM59-208ENST00000543469 GCC2Q8IWJ2 1684 aa11.11□□□□□ -0.63
TRIM59-208ENST00000543469 MLH3Q9UHC1 1453 aa11.1□□□□□ -0.63
TRIM59-208ENST00000543469 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
TRIM59-208ENST00000543469 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRIM59-208ENST00000543469 SAMD9LQ8IVG5 1584 aa11.09□□□□□ -0.63
TRIM59-208ENST00000543469 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
TRIM59-208ENST00000543469 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
TRIM59-208ENST00000543469 PLXNC1O60486 1568 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms