RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 DHX57Q6P158 1386 aaKnown RBP13.88□□□□□ -0.19
GNE-206ENST00000543356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.88□□□□□ -0.19
GNE-206ENST00000543356 DAPK1P53355 1430 aa13.88□□□□□ -0.19
GNE-206ENST00000543356 MYO5CQ9NQX4 1742 aa13.87□□□□□ -0.19
GNE-206ENST00000543356 CDC42BPBQ9Y5S2 1711 aa13.87□□□□□ -0.19
GNE-206ENST00000543356 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
GNE-206ENST00000543356 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
GNE-206ENST00000543356 ADGBQ8N7X0 1667 aa13.85□□□□□ -0.19
GNE-206ENST00000543356 ABCC5O15440 1437 aa13.85□□□□□ -0.19
GNE-206ENST00000543356 NAIPQ13075 1403 aa13.85□□□□□ -0.19
GNE-206ENST00000543356 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
GNE-206ENST00000543356 WDR7Q9Y4E6 1490 aa13.83□□□□□ -0.19
GNE-206ENST00000543356 ARHGEF5Q12774 1597 aa13.83□□□□□ -0.2
GNE-206ENST00000543356 SLC24A1O60721 1099 aa13.83□□□□□ -0.2
GNE-206ENST00000543356 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
GNE-206ENST00000543356 SAMD9LQ8IVG5 1584 aa13.82□□□□□ -0.2
GNE-206ENST00000543356 SHANK2Q9UPX8 1470 aa13.82□□□□□ -0.2
GNE-206ENST00000543356 ADGRL2O95490 1459 aa13.81□□□□□ -0.2
GNE-206ENST00000543356 ARAP3Q8WWN8 1544 aa13.81□□□□□ -0.2
GNE-206ENST00000543356 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
GNE-206ENST00000543356 ABCA9Q8IUA7 1624 aa13.79□□□□□ -0.2
GNE-206ENST00000543356 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
GNE-206ENST00000543356 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
GNE-206ENST00000543356 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
GNE-206ENST00000543356 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
GNE-206ENST00000543356 PLCH2O75038 1416 aa13.78□□□□□ -0.2
GNE-206ENST00000543356 PLEKHH2Q8IVE3 1493 aa13.78□□□□□ -0.2
GNE-206ENST00000543356 ASXL2Q76L83 1435 aa13.77□□□□□ -0.21
GNE-206ENST00000543356 MBD5Q9P267 1494 aa13.77□□□□□ -0.21
GNE-206ENST00000543356 ZNF777Q9ULD5 760 aaPredicted RBP13.77□□□□□ -0.21
GNE-206ENST00000543356 KDM6BO15054 1643 aa13.76□□□□□ -0.21
GNE-206ENST00000543356 CCDC141Q6ZP82 1450 aa13.75□□□□□ -0.21
GNE-206ENST00000543356 CHIC2Q9UKJ5 165 aa13.75□□□□□ -0.21
GNE-206ENST00000543356 MAST1Q9Y2H9 1570 aa13.75□□□□□ -0.21
GNE-206ENST00000543356 KIAA1107Q9UPP5 1409 aa13.75□□□□□ -0.21
GNE-206ENST00000543356 ACIN1Q9UKV3 1341 aaKnown RBP13.75□□□□□ -0.21
GNE-206ENST00000543356 SYCP2Q9BX26 1530 aa13.74□□□□□ -0.21
GNE-206ENST00000543356 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
GNE-206ENST00000543356 KCNH8Q96L42 1107 aa13.74□□□□□ -0.21
GNE-206ENST00000543356 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
GNE-206ENST00000543356 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
GNE-206ENST00000543356 ABCC1P33527 1531 aa13.73□□□□□ -0.21
GNE-206ENST00000543356 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
GNE-206ENST00000543356 RSPH4AQ5TD94 716 aa13.72□□□□□ -0.21
GNE-206ENST00000543356 ANKRD30AQ9BXX3 1397 aa13.72□□□□□ -0.21
GNE-206ENST00000543356 PLXNC1O60486 1568 aa13.69□□□□□ -0.22
GNE-206ENST00000543356 EFCAB2Q5VUJ9 269 aa13.69□□□□□ -0.22
GNE-206ENST00000543356 ARHGEF12Q9NZN5 1544 aa13.68□□□□□ -0.22
GNE-206ENST00000543356 HNRNPMP52272 730 aaKnown RBP eCLIP13.68□□□□□ -0.22
GNE-206ENST00000543356 CFAP74Q9C0B2 1584 aa13.67□□□□□ -0.22
GNE-206ENST00000543356 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
GNE-206ENST00000543356 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
GNE-206ENST00000543356 FANCAO15360 1455 aa13.66□□□□□ -0.22
GNE-206ENST00000543356 ANKRD50Q9ULJ7 1429 aa13.65□□□□□ -0.23
GNE-206ENST00000543356 DENND4BO75064 1496 aaPredicted RBP13.64□□□□□ -0.23
GNE-206ENST00000543356 KIF15Q9NS87 1388 aa13.64□□□□□ -0.23
GNE-206ENST00000543356 KDM5DQ9BY66 1539 aa13.63□□□□□ -0.23
GNE-206ENST00000543356 GLI2P10070 1586 aa13.62□□□□□ -0.23
GNE-206ENST00000543356 CYB5RLQ6IPT4 315 aa13.61□□□□□ -0.23
GNE-206ENST00000543356 TRAPPC8Q9Y2L5 1435 aa13.61□□□□□ -0.23
GNE-206ENST00000543356 MAP3K4Q9Y6R4 1608 aa13.61□□□□□ -0.23
GNE-206ENST00000543356 ZFYVE16Q7Z3T8 1539 aa13.61□□□□□ -0.23
GNE-206ENST00000543356 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
GNE-206ENST00000543356 INO80Q9ULG1 1556 aaPredicted RBP13.6□□□□□ -0.23
GNE-206ENST00000543356 PZPP20742 1482 aa13.6□□□□□ -0.23
GNE-206ENST00000543356 TRIM52Q96A61 297 aa13.6□□□□□ -0.23
GNE-206ENST00000543356 RTEL1-TNFRSF6BF6WH68 1400 aa13.6□□□□□ -0.23
GNE-206ENST00000543356 DUOX2Q9NRD8 1548 aa13.6□□□□□ -0.23
GNE-206ENST00000543356 CD109Q6YHK3 1445 aa13.6□□□□□ -0.23
GNE-206ENST00000543356 UNC13BO14795 1591 aa13.59□□□□□ -0.23
GNE-206ENST00000543356 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
GNE-206ENST00000543356 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
GNE-206ENST00000543356 MPHOSPH9Q99550 1183 aa13.58□□□□□ -0.24
GNE-206ENST00000543356 ERBINQ96RT1 1412 aa13.57□□□□□ -0.24
GNE-206ENST00000543356 DIP2BQ9P265 1576 aa13.56□□□□□ -0.24
GNE-206ENST00000543356 NEO1Q92859 1461 aa13.56□□□□□ -0.24
GNE-206ENST00000543356 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
GNE-206ENST00000543356 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
GNE-206ENST00000543356 SIN3AQ96ST3 1273 aa13.55□□□□□ -0.24
GNE-206ENST00000543356 KDM5CP41229 1560 aa13.54□□□□□ -0.24
GNE-206ENST00000543356 ZNF518AQ6AHZ1 1483 aa13.54□□□□□ -0.24
GNE-206ENST00000543356 MAGI2Q86UL8 1455 aa13.54□□□□□ -0.24
GNE-206ENST00000543356 SPAG9O60271 1321 aaKnown RBP13.54□□□□□ -0.24
GNE-206ENST00000543356 IQGAP3Q86VI3 1631 aa13.53□□□□□ -0.24
GNE-206ENST00000543356 POGZQ7Z3K3 1410 aa13.53□□□□□ -0.24
GNE-206ENST00000543356 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.24
GNE-206ENST00000543356 ANKRD30BQ9BXX2 1392 aa13.52□□□□□ -0.24
GNE-206ENST00000543356 EIF2AK4Q9P2K8 1649 aaKnown RBP13.52□□□□□ -0.25
GNE-206ENST00000543356 NEUROD1Q13562 356 aa13.51□□□□□ -0.25
GNE-206ENST00000543356 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
GNE-206ENST00000543356 FAM135AQ9P2D6 1515 aa13.51□□□□□ -0.25
GNE-206ENST00000543356 NUP155O75694 1391 aa13.51□□□□□ -0.25
GNE-206ENST00000543356 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
GNE-206ENST00000543356 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
GNE-206ENST00000543356 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
GNE-206ENST00000543356 TONSLQ96HA7 1378 aa13.5□□□□□ -0.25
GNE-206ENST00000543356 RPRD2Q5VT52 1461 aaKnown RBP13.49□□□□□ -0.25
GNE-206ENST00000543356 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
GNE-206ENST00000543356 PPRC1Q5VV67 1664 aaKnown RBP13.48□□□□□ -0.25
GNE-206ENST00000543356 RICTORQ6R327 1708 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms