RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
PRAME-214ENST00000543184 MSH5O43196 834 aa19.91■□□□□ 0.78
PRAME-214ENST00000543184 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
PRAME-214ENST00000543184 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
PRAME-214ENST00000543184 DNAJC5Q9H3Z4 198 aa19.9■□□□□ 0.78
PRAME-214ENST00000543184 ADCY10Q96PN6 1610 aa19.89■□□□□ 0.77
PRAME-214ENST00000543184 ABCC2Q92887 1545 aa19.89■□□□□ 0.77
PRAME-214ENST00000543184 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
PRAME-214ENST00000543184 CCER2I3L3R5 266 aa19.87■□□□□ 0.77
PRAME-214ENST00000543184 ZNF644Q9H582 1327 aaPredicted RBP19.84■□□□□ 0.77
PRAME-214ENST00000543184 CCDC18Q5T9S5 1454 aa19.83■□□□□ 0.77
PRAME-214ENST00000543184 CCDC184Q52MB2 194 aa19.81■□□□□ 0.76
PRAME-214ENST00000543184 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
PRAME-214ENST00000543184 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
PRAME-214ENST00000543184 PTPRKQ15262 1439 aa19.79■□□□□ 0.76
PRAME-214ENST00000543184 CNGB1Q14028 1251 aaPredicted RBP19.79■□□□□ 0.76
PRAME-214ENST00000543184 CFAP43Q8NDM7 1665 aa19.79■□□□□ 0.76
PRAME-214ENST00000543184 ASXL2Q76L83 1435 aa19.79■□□□□ 0.76
PRAME-214ENST00000543184 KIF14Q15058 1648 aa19.78■□□□□ 0.76
PRAME-214ENST00000543184 ZCCHC11Q5TAX3 1644 aaKnown RBP19.78■□□□□ 0.76
PRAME-214ENST00000543184 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
PRAME-214ENST00000543184 MAP3K1Q13233 1512 aa19.77■□□□□ 0.76
PRAME-214ENST00000543184 KDM5BQ9UGL1 1544 aa19.77■□□□□ 0.76
PRAME-214ENST00000543184 RRP7BPQ9NSQ0 103 aa19.76■□□□□ 0.75
PRAME-214ENST00000543184 TIMELESSQ9UNS1 1208 aa19.76■□□□□ 0.75
PRAME-214ENST00000543184 SENP3-EIF4A1A0A087X0R7 540 aa19.75■□□□□ 0.75
PRAME-214ENST00000543184 CFDP1Q9UEE9 299 aaPredicted RBP19.75■□□□□ 0.75
PRAME-214ENST00000543184 UHRF1BP1LA0JNW5 1464 aa19.73■□□□□ 0.75
PRAME-214ENST00000543184 TRHP20396 242 aaPredicted RBP19.72■□□□□ 0.75
PRAME-214ENST00000543184 FAM69CQ0P6D2 419 aa19.72■□□□□ 0.75
PRAME-214ENST00000543184 EHBP1L1Q8N3D4 1523 aa19.72■□□□□ 0.75
PRAME-214ENST00000543184 FOXD1Q16676 465 aa19.72■□□□□ 0.75
PRAME-214ENST00000543184 HSPA5P11021 654 aaKnown RBP19.72■□□□□ 0.75
PRAME-214ENST00000543184 FAM9BQ8IZU0 186 aa19.71■□□□□ 0.75
PRAME-214ENST00000543184 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
PRAME-214ENST00000543184 FGD6Q6ZV73 1430 aa19.7■□□□□ 0.74
PRAME-214ENST00000543184 WDR7Q9Y4E6 1490 aa19.68■□□□□ 0.74
PRAME-214ENST00000543184 HNRNPMP52272 730 aaKnown RBP eCLIP19.67■□□□□ 0.743e-11■□□□□ 9.5
PRAME-214ENST00000543184 B4GALNT3Q6L9W6 998 aa19.66■□□□□ 0.74
PRAME-214ENST00000543184 C11orf95C9JLR9 678 aaPredicted RBP19.66■□□□□ 0.74
PRAME-214ENST00000543184 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
PRAME-214ENST00000543184 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
PRAME-214ENST00000543184 TTC37Q6PGP7 1564 aa19.63■□□□□ 0.73
PRAME-214ENST00000543184 ERICH6Q7L0X2 663 aa19.63■□□□□ 0.73
PRAME-214ENST00000543184 GPATCH8Q9UKJ3 1502 aaKnown RBP19.63■□□□□ 0.73
PRAME-214ENST00000543184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.62■□□□□ 0.737e-13■□□□□ 11.3
PRAME-214ENST00000543184 NAIPQ13075 1403 aa19.61■□□□□ 0.73
PRAME-214ENST00000543184 PTPN23Q9H3S7 1636 aa19.59■□□□□ 0.73
PRAME-214ENST00000543184 ABCC10Q5T3U5 1492 aa19.59■□□□□ 0.73
PRAME-214ENST00000543184 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
PRAME-214ENST00000543184 HFM1A2PYH4 1435 aa19.58■□□□□ 0.73
PRAME-214ENST00000543184 ARHGAP5Q13017 1502 aa19.56■□□□□ 0.72
PRAME-214ENST00000543184 AFAP1Q8N556 730 aa19.55■□□□□ 0.72
PRAME-214ENST00000543184 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
PRAME-214ENST00000543184 L3MBTL2Q969R5 705 aa19.55■□□□□ 0.72
PRAME-214ENST00000543184 EIF4G2P78344 907 aaKnown RBP eCLIP19.55■□□□□ 0.72
PRAME-214ENST00000543184 CD109Q6YHK3 1445 aa19.54■□□□□ 0.72
PRAME-214ENST00000543184 POLR3GLQ9BT43 218 aa19.54■□□□□ 0.72
PRAME-214ENST00000543184 RAPGEF3O95398 923 aa19.53■□□□□ 0.72
PRAME-214ENST00000543184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.53■□□□□ 0.723e-13■■■■■ 30.1
PRAME-214ENST00000543184 EFCAB2Q5VUJ9 269 aa19.52■□□□□ 0.72
PRAME-214ENST00000543184 FANCIQ9NVI1 1328 aa19.52■□□□□ 0.72
PRAME-214ENST00000543184 PPP4R2Q9NY27 417 aa19.51■□□□□ 0.71
PRAME-214ENST00000543184 PRKRIP1Q9H875 184 aaPredicted RBP19.49■□□□□ 0.71
PRAME-214ENST00000543184 CAMSAP2Q08AD1 1489 aa19.49■□□□□ 0.71
PRAME-214ENST00000543184 CDC42BPAQ5VT25 1732 aa19.49■□□□□ 0.71
PRAME-214ENST00000543184 TSPOAP1O95153 1857 aa19.49■□□□□ 0.71
PRAME-214ENST00000543184 KDM6BO15054 1643 aa19.49■□□□□ 0.71
PRAME-214ENST00000543184 DENND4BO75064 1496 aaPredicted RBP19.48■□□□□ 0.71
PRAME-214ENST00000543184 NBPF8Q3BBV2 869 aa19.48■□□□□ 0.71
PRAME-214ENST00000543184 PLCH2O75038 1416 aa19.48■□□□□ 0.71
PRAME-214ENST00000543184 MPHOSPH9Q99550 1183 aa19.48■□□□□ 0.71
PRAME-214ENST00000543184 FANCAO15360 1455 aa19.47■□□□□ 0.71
PRAME-214ENST00000543184 NBR1Q14596 966 aa19.45■□□□□ 0.7
PRAME-214ENST00000543184 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
PRAME-214ENST00000543184 SYCP2Q9BX26 1530 aa19.43■□□□□ 0.7
PRAME-214ENST00000543184 ARHGEF12Q9NZN5 1544 aa19.43■□□□□ 0.7
PRAME-214ENST00000543184 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
PRAME-214ENST00000543184 CNTLNQ9NXG0 1405 aa19.43■□□□□ 0.7
PRAME-214ENST00000543184 TSPY4P0CV99 314 aa19.43■□□□□ 0.7
PRAME-214ENST00000543184 TSPY10P0CW01 314 aa19.43■□□□□ 0.7
PRAME-214ENST00000543184 TRAPPC8Q9Y2L5 1435 aa19.42■□□□□ 0.7
PRAME-214ENST00000543184 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
PRAME-214ENST00000543184 ABCC5O15440 1437 aa19.42■□□□□ 0.7
PRAME-214ENST00000543184 SCAPERQ9BY12 1400 aa19.42■□□□□ 0.7
PRAME-214ENST00000543184 SAMD9LQ8IVG5 1584 aa19.42■□□□□ 0.7
PRAME-214ENST00000543184 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
PRAME-214ENST00000543184 CCDC7Q96M83 1385 aa19.41■□□□□ 0.7
PRAME-214ENST00000543184 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
PRAME-214ENST00000543184 DAPK1P53355 1430 aa19.39■□□□□ 0.69
PRAME-214ENST00000543184 MYO5CQ9NQX4 1742 aa19.39■□□□□ 0.69
PRAME-214ENST00000543184 PREX2Q70Z35 1606 aa19.39■□□□□ 0.69
PRAME-214ENST00000543184 AKNAQ7Z591 1439 aa19.39■□□□□ 0.69
PRAME-214ENST00000543184 ADGRL1O94910 1474 aa19.39■□□□□ 0.69
PRAME-214ENST00000543184 ABCA9Q8IUA7 1624 aa19.38■□□□□ 0.69
PRAME-214ENST00000543184 KIF7Q2M1P5 1343 aa19.37■□□□□ 0.69
PRAME-214ENST00000543184 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
PRAME-214ENST00000543184 DEKP35659 375 aaKnown RBP19.36■□□□□ 0.69
PRAME-214ENST00000543184 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
PRAME-214ENST00000543184 TCOF1Q13428 1488 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms