RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
NPIPB4-215ENST00000542133 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
NPIPB4-215ENST00000542133 DENND4BO75064 1496 aaPredicted RBP13.38□□□□□ -0.27
NPIPB4-215ENST00000542133 FHOD3Q2V2M9 1422 aa13.38□□□□□ -0.27
NPIPB4-215ENST00000542133 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
NPIPB4-215ENST00000542133 ZFYVE16Q7Z3T8 1539 aa13.37□□□□□ -0.27
NPIPB4-215ENST00000542133 STRCQ7RTU9 1775 aa13.36□□□□□ -0.27
NPIPB4-215ENST00000542133 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
NPIPB4-215ENST00000542133 CFAP74Q9C0B2 1584 aa13.36□□□□□ -0.27
NPIPB4-215ENST00000542133 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
NPIPB4-215ENST00000542133 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
NPIPB4-215ENST00000542133 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
NPIPB4-215ENST00000542133 RAPGEF6Q8TEU7 1601 aa13.34□□□□□ -0.27
NPIPB4-215ENST00000542133 ARHGEF12Q9NZN5 1544 aa13.33□□□□□ -0.28
NPIPB4-215ENST00000542133 MAGI2Q86UL8 1455 aa13.31□□□□□ -0.28
NPIPB4-215ENST00000542133 SAMD9Q5K651 1589 aa13.31□□□□□ -0.28
NPIPB4-215ENST00000542133 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
NPIPB4-215ENST00000542133 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
NPIPB4-215ENST00000542133 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
NPIPB4-215ENST00000542133 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
NPIPB4-215ENST00000542133 MLECQ14165 292 aa13.28□□□□□ -0.28
NPIPB4-215ENST00000542133 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
NPIPB4-215ENST00000542133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.27□□□□□ -0.29
NPIPB4-215ENST00000542133 PTPRTO14522 1441 aa13.26□□□□□ -0.29
NPIPB4-215ENST00000542133 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
NPIPB4-215ENST00000542133 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
NPIPB4-215ENST00000542133 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
NPIPB4-215ENST00000542133 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
NPIPB4-215ENST00000542133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
NPIPB4-215ENST00000542133 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
NPIPB4-215ENST00000542133 CEBPAP49715 358 aaPredicted RBP13.22□□□□□ -0.29
NPIPB4-215ENST00000542133 ATP10AO60312 1499 aa13.22□□□□□ -0.29
NPIPB4-215ENST00000542133 MYT1Q01538 1121 aa13.19□□□□□ -0.3
NPIPB4-215ENST00000542133 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
NPIPB4-215ENST00000542133 C3P01024 1663 aa13.18□□□□□ -0.3
NPIPB4-215ENST00000542133 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
NPIPB4-215ENST00000542133 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
NPIPB4-215ENST00000542133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.18□□□□□ -0.34e-14■■■□□ 17.5
NPIPB4-215ENST00000542133 NCOA1Q15788 1441 aa13.16□□□□□ -0.3
NPIPB4-215ENST00000542133 PLEKHD1A6NEE1 506 aa13.16□□□□□ -0.3
NPIPB4-215ENST00000542133 KCNA4P22459 653 aa13.14□□□□□ -0.31
NPIPB4-215ENST00000542133 KDM5CP41229 1560 aa13.14□□□□□ -0.31
NPIPB4-215ENST00000542133 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
NPIPB4-215ENST00000542133 DIP2CQ9Y2E4 1556 aa13.14□□□□□ -0.31
NPIPB4-215ENST00000542133 PLCH2O75038 1416 aa13.13□□□□□ -0.31
NPIPB4-215ENST00000542133 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
NPIPB4-215ENST00000542133 MYO5CQ9NQX4 1742 aa13.12□□□□□ -0.31
NPIPB4-215ENST00000542133 ZNF518AQ6AHZ1 1483 aa13.11□□□□□ -0.31
NPIPB4-215ENST00000542133 CDK13Q14004 1512 aaKnown RBP13.11□□□□□ -0.31
NPIPB4-215ENST00000542133 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
NPIPB4-215ENST00000542133 TRAPPC8Q9Y2L5 1435 aa13.1□□□□□ -0.31
NPIPB4-215ENST00000542133 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
NPIPB4-215ENST00000542133 AGLP35573 1532 aa13.08□□□□□ -0.31
NPIPB4-215ENST00000542133 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
NPIPB4-215ENST00000542133 DAXXQ9UER7 740 aaPredicted RBP13.08□□□□□ -0.32
NPIPB4-215ENST00000542133 ZNF335Q9H4Z2 1342 aaPredicted RBP13.07□□□□□ -0.32
NPIPB4-215ENST00000542133 KIF14Q15058 1648 aa13.04□□□□□ -0.32
NPIPB4-215ENST00000542133 EFCAB2Q5VUJ9 269 aa13.04□□□□□ -0.32
NPIPB4-215ENST00000542133 MROH2AA6NES4 1674 aa13.04□□□□□ -0.32
NPIPB4-215ENST00000542133 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
NPIPB4-215ENST00000542133 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
NPIPB4-215ENST00000542133 MLH3Q9UHC1 1453 aa13.04□□□□□ -0.32
NPIPB4-215ENST00000542133 NPATQ14207 1427 aa13.03□□□□□ -0.32
NPIPB4-215ENST00000542133 ARHGAP5Q13017 1502 aa13.03□□□□□ -0.32
NPIPB4-215ENST00000542133 MYO3AQ8NEV4 1616 aa13.02□□□□□ -0.32
NPIPB4-215ENST00000542133 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
NPIPB4-215ENST00000542133 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
NPIPB4-215ENST00000542133 TCOF1Q13428 1488 aaKnown RBP13.01□□□□□ -0.33
NPIPB4-215ENST00000542133 NCKAP5LQ9HCH0 1330 aa13□□□□□ -0.33
NPIPB4-215ENST00000542133 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
NPIPB4-215ENST00000542133 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
NPIPB4-215ENST00000542133 HSPA1LP34931 641 aa12.99□□□□□ -0.33
NPIPB4-215ENST00000542133 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
NPIPB4-215ENST00000542133 ABCC1P33527 1531 aa12.98□□□□□ -0.33
NPIPB4-215ENST00000542133 SUPT6HQ7KZ85 1726 aaKnown RBP12.98□□□□□ -0.33
NPIPB4-215ENST00000542133 ITSN2Q9NZM3 1697 aa12.98□□□□□ -0.33
NPIPB4-215ENST00000542133 KIDINS220Q9ULH0 1771 aa12.97□□□□□ -0.33
NPIPB4-215ENST00000542133 MYT1LQ9UL68 1186 aa12.97□□□□□ -0.33
NPIPB4-215ENST00000542133 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.33
NPIPB4-215ENST00000542133 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
NPIPB4-215ENST00000542133 PREX2Q70Z35 1606 aa12.95□□□□□ -0.34
NPIPB4-215ENST00000542133 PKD2Q13563 968 aa12.95□□□□□ -0.34
NPIPB4-215ENST00000542133 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
NPIPB4-215ENST00000542133 CPS1P31327 1500 aa12.93□□□□□ -0.34
NPIPB4-215ENST00000542133 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
NPIPB4-215ENST00000542133 ZMYM3Q14202 1370 aa12.93□□□□□ -0.34
NPIPB4-215ENST00000542133 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
NPIPB4-215ENST00000542133 ALKQ9UM73 1620 aa12.91□□□□□ -0.34
NPIPB4-215ENST00000542133 CLIP1P30622 1438 aa12.91□□□□□ -0.34
NPIPB4-215ENST00000542133 PTPRKQ15262 1439 aa12.91□□□□□ -0.34
NPIPB4-215ENST00000542133 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
NPIPB4-215ENST00000542133 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
NPIPB4-215ENST00000542133 LRRIQ1Q96JM4 1722 aa12.9□□□□□ -0.34
NPIPB4-215ENST00000542133 PLXNC1O60486 1568 aa12.9□□□□□ -0.35
NPIPB4-215ENST00000542133 SAMD9LQ8IVG5 1584 aa12.9□□□□□ -0.35
NPIPB4-215ENST00000542133 TOM1O60784 492 aa12.89□□□□□ -0.35
NPIPB4-215ENST00000542133 CDK11AQ9UQ88 783 aaPredicted RBP12.89□□□□□ -0.35
NPIPB4-215ENST00000542133 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
NPIPB4-215ENST00000542133 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
NPIPB4-215ENST00000542133 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms