RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 ITSN2Q9NZM3 1697 aa9.37□□□□□ -0.91
NKRF-204ENST00000542113 ANKRD30BQ9BXX2 1392 aa9.37□□□□□ -0.91
NKRF-204ENST00000542113 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.91
NKRF-204ENST00000542113 ABCC5O15440 1437 aa9.37□□□□□ -0.91
NKRF-204ENST00000542113 NUP153P49790 1475 aaKnown RBP9.36□□□□□ -0.91
NKRF-204ENST00000542113 DISP1Q96F81 1524 aa9.36□□□□□ -0.91
NKRF-204ENST00000542113 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
NKRF-204ENST00000542113 KDM6BO15054 1643 aa9.36□□□□□ -0.91
NKRF-204ENST00000542113 CCDC7Q96M83 1385 aa9.36□□□□□ -0.91
NKRF-204ENST00000542113 TROQ12816 1431 aaPredicted RBP9.36□□□□□ -0.91
NKRF-204ENST00000542113 GRIN2AQ12879 1464 aa9.36□□□□□ -0.91
NKRF-204ENST00000542113 TEX14Q8IWB6 1497 aa9.36□□□□□ -0.91
NKRF-204ENST00000542113 ANP32EQ9BTT0 268 aa9.35□□□□□ -0.91
NKRF-204ENST00000542113 ADGBQ8N7X0 1667 aa9.34□□□□□ -0.91
NKRF-204ENST00000542113 MAGI1Q96QZ7 1491 aaPredicted RBP9.34□□□□□ -0.91
NKRF-204ENST00000542113 SLC4A1APQ9BWU0 796 aaKnown RBP9.34□□□□□ -0.91
NKRF-204ENST00000542113 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
NKRF-204ENST00000542113 ADGRL2O95490 1459 aa9.34□□□□□ -0.91
NKRF-204ENST00000542113 ADCY10Q96PN6 1610 aa9.33□□□□□ -0.92
NKRF-204ENST00000542113 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
NKRF-204ENST00000542113 ARID4BQ4LE39 1312 aaPredicted RBP9.32□□□□□ -0.92
NKRF-204ENST00000542113 CAMSAP2Q08AD1 1489 aa9.32□□□□□ -0.92
NKRF-204ENST00000542113 PRKRIP1Q9H875 184 aaPredicted RBP9.32□□□□□ -0.92
NKRF-204ENST00000542113 ANKRD30AQ9BXX3 1397 aa9.31□□□□□ -0.92
NKRF-204ENST00000542113 CFDP1Q9UEE9 299 aaPredicted RBP9.31□□□□□ -0.92
NKRF-204ENST00000542113 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
NKRF-204ENST00000542113 EIF4G3O43432 1585 aaKnown RBP9.31□□□□□ -0.92
NKRF-204ENST00000542113 ZNF608Q9ULD9 1512 aaPredicted RBP9.31□□□□□ -0.92
NKRF-204ENST00000542113 SPATA31E1Q6ZUB1 1445 aa9.31□□□□□ -0.92
NKRF-204ENST00000542113 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
NKRF-204ENST00000542113 RBM19Q9Y4C8 960 aaKnown RBP9.3□□□□□ -0.92
NKRF-204ENST00000542113 SYNJ2O15056 1496 aa9.3□□□□□ -0.92
NKRF-204ENST00000542113 SHANK2Q9UPX8 1470 aa9.3□□□□□ -0.92
NKRF-204ENST00000542113 CROCC2H7BZ55 1655 aa9.29□□□□□ -0.92
NKRF-204ENST00000542113 PZPP20742 1482 aa9.29□□□□□ -0.92
NKRF-204ENST00000542113 ROCK2O75116 1388 aaKnown RBP9.29□□□□□ -0.92
NKRF-204ENST00000542113 MRS2Q9HD23 443 aa9.29□□□□□ -0.92
NKRF-204ENST00000542113 GPATCH8Q9UKJ3 1502 aaKnown RBP9.29□□□□□ -0.92
NKRF-204ENST00000542113 PPP4R2Q9NY27 417 aa9.29□□□□□ -0.92
NKRF-204ENST00000542113 MBD5Q9P267 1494 aa9.28□□□□□ -0.92
NKRF-204ENST00000542113 KIF14Q15058 1648 aa9.28□□□□□ -0.92
NKRF-204ENST00000542113 ARID3CA6NKF2 412 aa9.28□□□□□ -0.92
NKRF-204ENST00000542113 KIF7Q2M1P5 1343 aa9.28□□□□□ -0.92
NKRF-204ENST00000542113 PRG4Q92954 1404 aaPredicted RBP9.27□□□□□ -0.93
NKRF-204ENST00000542113 NBPF8Q3BBV2 869 aa9.27□□□□□ -0.93
NKRF-204ENST00000542113 ARHGEF12Q9NZN5 1544 aa9.27□□□□□ -0.93
NKRF-204ENST00000542113 FOXD1Q16676 465 aa9.27□□□□□ -0.93
NKRF-204ENST00000542113 CHMP7Q8WUX9 453 aaPredicted RBP9.27□□□□□ -0.93
NKRF-204ENST00000542113 DNAJC5BQ9UF47 199 aa9.27□□□□□ -0.93
NKRF-204ENST00000542113 ZNF644Q9H582 1327 aaPredicted RBP9.26□□□□□ -0.93
NKRF-204ENST00000542113 ANKRD50Q9ULJ7 1429 aa9.26□□□□□ -0.93
NKRF-204ENST00000542113 NUP160Q12769 1436 aa9.25□□□□□ -0.93
NKRF-204ENST00000542113 FANCIQ9NVI1 1328 aa9.25□□□□□ -0.93
NKRF-204ENST00000542113 USP47Q96K76 1375 aa9.25□□□□□ -0.93
NKRF-204ENST00000542113 UHRF1BP1Q6BDS2 1440 aa9.25□□□□□ -0.93
NKRF-204ENST00000542113 KDM5DQ9BY66 1539 aa9.25□□□□□ -0.93
NKRF-204ENST00000542113 CEP170Q5SW79 1584 aa9.24□□□□□ -0.93
NKRF-204ENST00000542113 FAM9BQ8IZU0 186 aa9.24□□□□□ -0.93
NKRF-204ENST00000542113 ERCC6Q03468 1493 aa9.24□□□□□ -0.93
NKRF-204ENST00000542113 PLB1Q6P1J6 1458 aa9.24□□□□□ -0.93
NKRF-204ENST00000542113 RALGAPBQ86X10 1494 aa9.24□□□□□ -0.93
NKRF-204ENST00000542113 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
NKRF-204ENST00000542113 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
NKRF-204ENST00000542113 C11orf95C9JLR9 678 aaPredicted RBP9.23□□□□□ -0.93
NKRF-204ENST00000542113 PKD2Q13563 968 aa9.23□□□□□ -0.93
NKRF-204ENST00000542113 C9orf84Q5VXU9 1444 aa9.23□□□□□ -0.93
NKRF-204ENST00000542113 TSPY4P0CV99 314 aa9.22□□□□□ -0.93
NKRF-204ENST00000542113 TSPY10P0CW01 314 aa9.22□□□□□ -0.93
NKRF-204ENST00000542113 ABCA8O94911 1581 aa9.22□□□□□ -0.93
NKRF-204ENST00000542113 ARHGEF5Q12774 1597 aa9.22□□□□□ -0.93
NKRF-204ENST00000542113 ZNF777Q9ULD5 760 aaPredicted RBP9.22□□□□□ -0.93
NKRF-204ENST00000542113 SMG6Q86US8 1419 aaKnown RBP9.22□□□□□ -0.93
NKRF-204ENST00000542113 KDM5CP41229 1560 aa9.22□□□□□ -0.93
NKRF-204ENST00000542113 JPH4Q96JJ6 628 aa9.21□□□□□ -0.93
NKRF-204ENST00000542113 ABCC10Q5T3U5 1492 aa9.21□□□□□ -0.93
NKRF-204ENST00000542113 RSPH4AQ5TD94 716 aa9.21□□□□□ -0.94
NKRF-204ENST00000542113 ERICH6Q7L0X2 663 aa9.21□□□□□ -0.94
NKRF-204ENST00000542113 NUP155O75694 1391 aa9.21□□□□□ -0.94
NKRF-204ENST00000542113 DHX29Q7Z478 1369 aaKnown RBP9.21□□□□□ -0.94
NKRF-204ENST00000542113 KIF15Q9NS87 1388 aa9.2□□□□□ -0.94
NKRF-204ENST00000542113 CDC42BPAQ5VT25 1732 aa9.2□□□□□ -0.94
NKRF-204ENST00000542113 CCDC184Q52MB2 194 aa9.2□□□□□ -0.94
NKRF-204ENST00000542113 PTPRGP23470 1445 aa9.19□□□□□ -0.94
NKRF-204ENST00000542113 MYT1LQ9UL68 1186 aa9.19□□□□□ -0.94
NKRF-204ENST00000542113 NUDCQ9Y266 331 aa9.18□□□□□ -0.94
NKRF-204ENST00000542113 IRX6P78412 446 aaPredicted RBP9.18□□□□□ -0.94
NKRF-204ENST00000542113 ZNF326Q5BKZ1 582 aaKnown RBP9.18□□□□□ -0.94
NKRF-204ENST00000542113 CARD11Q9BXL7 1154 aa9.18□□□□□ -0.94
NKRF-204ENST00000542113 ATP10BO94823 1461 aa9.18□□□□□ -0.94
NKRF-204ENST00000542113 CCDC141Q6ZP82 1450 aa9.18□□□□□ -0.94
NKRF-204ENST00000542113 RALBP1Q15311 655 aa9.17□□□□□ -0.94
NKRF-204ENST00000542113 BRD4O60885 1362 aaPredicted RBP9.17□□□□□ -0.94
NKRF-204ENST00000542113 FBLN2P98095 1184 aa9.16□□□□□ -0.94
NKRF-204ENST00000542113 BCORL1Q5H9F3 1711 aa9.16□□□□□ -0.94
NKRF-204ENST00000542113 TMC1Q8TDI8 760 aa9.16□□□□□ -0.94
NKRF-204ENST00000542113 POLR3GLQ9BT43 218 aa9.15□□□□□ -0.94
NKRF-204ENST00000542113 RNF123Q5XPI4 1314 aa9.15□□□□□ -0.95
NKRF-204ENST00000542113 MYBBP1AQ9BQG0 1328 aaKnown RBP9.15□□□□□ -0.95
NKRF-204ENST00000542113 PLEKHH2Q8IVE3 1493 aa9.14□□□□□ -0.95
NKRF-204ENST00000542113 PREX2Q70Z35 1606 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms