RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
CX3CR1-206ENST00000542107 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
CX3CR1-206ENST00000542107 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
CX3CR1-206ENST00000542107 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
CX3CR1-206ENST00000542107 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
CX3CR1-206ENST00000542107 PRG4Q92954 1404 aaPredicted RBP13.93□□□□□ -0.18
CX3CR1-206ENST00000542107 WDR62O43379 1518 aa13.93□□□□□ -0.18
CX3CR1-206ENST00000542107 DAPK1P53355 1430 aa13.92□□□□□ -0.18
CX3CR1-206ENST00000542107 KDM5BQ9UGL1 1544 aa13.92□□□□□ -0.18
CX3CR1-206ENST00000542107 ABCC5O15440 1437 aa13.92□□□□□ -0.18
CX3CR1-206ENST00000542107 SENP3-EIF4A1A0A087X0R7 540 aa13.91□□□□□ -0.18
CX3CR1-206ENST00000542107 KIAA0586Q9BVV6 1533 aa13.91□□□□□ -0.18
CX3CR1-206ENST00000542107 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
CX3CR1-206ENST00000542107 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
CX3CR1-206ENST00000542107 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
CX3CR1-206ENST00000542107 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
CX3CR1-206ENST00000542107 NUP153P49790 1475 aaKnown RBP13.9□□□□□ -0.19
CX3CR1-206ENST00000542107 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
CX3CR1-206ENST00000542107 ANKRD30BQ9BXX2 1392 aa13.89□□□□□ -0.19
CX3CR1-206ENST00000542107 PKD2Q13563 968 aa13.88□□□□□ -0.19
CX3CR1-206ENST00000542107 PLB1Q6P1J6 1458 aa13.88□□□□□ -0.19
CX3CR1-206ENST00000542107 PRKRIP1Q9H875 184 aaPredicted RBP13.87□□□□□ -0.19
CX3CR1-206ENST00000542107 GRIN2AQ12879 1464 aa13.86□□□□□ -0.19
CX3CR1-206ENST00000542107 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
CX3CR1-206ENST00000542107 PLEKHD1A6NEE1 506 aa13.86□□□□□ -0.19
CX3CR1-206ENST00000542107 MYT1Q01538 1121 aa13.86□□□□□ -0.19
CX3CR1-206ENST00000542107 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
CX3CR1-206ENST00000542107 AKNAQ7Z591 1439 aa13.86□□□□□ -0.19
CX3CR1-206ENST00000542107 KIAA0556O60303 1618 aa13.84□□□□□ -0.19
CX3CR1-206ENST00000542107 KIF7Q2M1P5 1343 aa13.84□□□□□ -0.19
CX3CR1-206ENST00000542107 GCC2Q8IWJ2 1684 aa13.84□□□□□ -0.19
CX3CR1-206ENST00000542107 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
CX3CR1-206ENST00000542107 CNTLNQ9NXG0 1405 aa13.83□□□□□ -0.19
CX3CR1-206ENST00000542107 TROQ12816 1431 aaPredicted RBP13.82□□□□□ -0.2
CX3CR1-206ENST00000542107 RBM19Q9Y4C8 960 aaKnown RBP13.82□□□□□ -0.2
CX3CR1-206ENST00000542107 RPRD2Q5VT52 1461 aaKnown RBP13.82□□□□□ -0.2
CX3CR1-206ENST00000542107 HNRNPMP52272 730 aaKnown RBP eCLIP13.81□□□□□ -0.2
CX3CR1-206ENST00000542107 RAPGEF6Q8TEU7 1601 aa13.8□□□□□ -0.2
CX3CR1-206ENST00000542107 TSPY4P0CV99 314 aa13.8□□□□□ -0.2
CX3CR1-206ENST00000542107 TSPY10P0CW01 314 aa13.8□□□□□ -0.2
CX3CR1-206ENST00000542107 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
CX3CR1-206ENST00000542107 NCOA1Q15788 1441 aa13.8□□□□□ -0.2
CX3CR1-206ENST00000542107 NUP155O75694 1391 aa13.79□□□□□ -0.2
CX3CR1-206ENST00000542107 GPATCH8Q9UKJ3 1502 aaKnown RBP13.79□□□□□ -0.2
CX3CR1-206ENST00000542107 CARMIL2Q6F5E8 1435 aa13.79□□□□□ -0.2
CX3CR1-206ENST00000542107 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
CX3CR1-206ENST00000542107 ANKRD30AQ9BXX3 1397 aa13.77□□□□□ -0.2
CX3CR1-206ENST00000542107 DNMT1P26358 1616 aaKnown RBP13.77□□□□□ -0.21
CX3CR1-206ENST00000542107 TEX14Q8IWB6 1497 aa13.76□□□□□ -0.21
CX3CR1-206ENST00000542107 CARD11Q9BXL7 1154 aa13.76□□□□□ -0.21
CX3CR1-206ENST00000542107 PZPP20742 1482 aa13.76□□□□□ -0.21
CX3CR1-206ENST00000542107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
CX3CR1-206ENST00000542107 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
CX3CR1-206ENST00000542107 ANKRD50Q9ULJ7 1429 aa13.75□□□□□ -0.21
CX3CR1-206ENST00000542107 USP47Q96K76 1375 aa13.74□□□□□ -0.21
CX3CR1-206ENST00000542107 KIF14Q15058 1648 aa13.74□□□□□ -0.21
CX3CR1-206ENST00000542107 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
CX3CR1-206ENST00000542107 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
CX3CR1-206ENST00000542107 CEP170Q5SW79 1584 aa13.74□□□□□ -0.21
CX3CR1-206ENST00000542107 B4GALNT3Q6L9W6 998 aa13.73□□□□□ -0.21
CX3CR1-206ENST00000542107 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
CX3CR1-206ENST00000542107 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
CX3CR1-206ENST00000542107 SPATA31E1Q6ZUB1 1445 aa13.71□□□□□ -0.21
CX3CR1-206ENST00000542107 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
CX3CR1-206ENST00000542107 ST20-MTHFSA0A0A6YYL1 179 aa13.7□□□□□ -0.22
CX3CR1-206ENST00000542107 TMC1Q8TDI8 760 aa13.69□□□□□ -0.22
CX3CR1-206ENST00000542107 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
CX3CR1-206ENST00000542107 ATP10BO94823 1461 aa13.69□□□□□ -0.22
CX3CR1-206ENST00000542107 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
CX3CR1-206ENST00000542107 C9orf84Q5VXU9 1444 aa13.68□□□□□ -0.22
CX3CR1-206ENST00000542107 PPP4R2Q9NY27 417 aa13.68□□□□□ -0.22
CX3CR1-206ENST00000542107 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
CX3CR1-206ENST00000542107 PTPRGP23470 1445 aa13.66□□□□□ -0.22
CX3CR1-206ENST00000542107 NUP160Q12769 1436 aa13.64□□□□□ -0.23
CX3CR1-206ENST00000542107 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
CX3CR1-206ENST00000542107 ADGRL2O95490 1459 aa13.62□□□□□ -0.23
CX3CR1-206ENST00000542107 ITSN2Q9NZM3 1697 aa13.62□□□□□ -0.23
CX3CR1-206ENST00000542107 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
CX3CR1-206ENST00000542107 ROCK2O75116 1388 aaKnown RBP13.61□□□□□ -0.23
CX3CR1-206ENST00000542107 MSH5O43196 834 aa13.6□□□□□ -0.23
CX3CR1-206ENST00000542107 ABCC10Q5T3U5 1492 aa13.59□□□□□ -0.23
CX3CR1-206ENST00000542107 PNISRQ8TF01 805 aaKnown RBP13.59□□□□□ -0.23
CX3CR1-206ENST00000542107 BCORL1Q5H9F3 1711 aa13.58□□□□□ -0.24
CX3CR1-206ENST00000542107 MBD5Q9P267 1494 aa13.58□□□□□ -0.24
CX3CR1-206ENST00000542107 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
CX3CR1-206ENST00000542107 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
CX3CR1-206ENST00000542107 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
CX3CR1-206ENST00000542107 ADGBQ8N7X0 1667 aa13.57□□□□□ -0.24
CX3CR1-206ENST00000542107 ABCA8O94911 1581 aa13.56□□□□□ -0.24
CX3CR1-206ENST00000542107 CC2D1BQ5T0F9 858 aaKnown RBP13.56□□□□□ -0.24
CX3CR1-206ENST00000542107 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
CX3CR1-206ENST00000542107 CDC42BPAQ5VT25 1732 aa13.55□□□□□ -0.24
CX3CR1-206ENST00000542107 CCDC144AA2RUR9 1427 aa13.54□□□□□ -0.24
CX3CR1-206ENST00000542107 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
CX3CR1-206ENST00000542107 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
CX3CR1-206ENST00000542107 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
CX3CR1-206ENST00000542107 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
CX3CR1-206ENST00000542107 KDM5CP41229 1560 aa13.52□□□□□ -0.24
CX3CR1-206ENST00000542107 RSPH4AQ5TD94 716 aa13.52□□□□□ -0.24
CX3CR1-206ENST00000542107 CCDC141Q6ZP82 1450 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms