RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 DCAF8Q5TAQ9 597 aa13.57□□□□□ -0.24
GABRB3-204ENST00000541819 HDGFL2Q7Z4V5 671 aaPredicted RBP13.57□□□□□ -0.24
GABRB3-204ENST00000541819 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
GABRB3-204ENST00000541819 GOLGA3Q08378 1498 aa13.57□□□□□ -0.24
GABRB3-204ENST00000541819 IPO8O15397 1037 aaKnown RBP13.57□□□□□ -0.24
GABRB3-204ENST00000541819 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
GABRB3-204ENST00000541819 GORABQ5T7V8 394 aa13.56□□□□□ -0.24
GABRB3-204ENST00000541819 CALD1Q05682 793 aaKnown RBP13.56□□□□□ -0.24
GABRB3-204ENST00000541819 APBB1O00213 710 aa13.55□□□□□ -0.24
GABRB3-204ENST00000541819 GBP4Q96PP9 640 aa13.55□□□□□ -0.24
GABRB3-204ENST00000541819 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
GABRB3-204ENST00000541819 HSP90B1P14625 803 aaKnown RBP13.54□□□□□ -0.24
GABRB3-204ENST00000541819 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
GABRB3-204ENST00000541819 PDE4CQ08493 712 aa13.54□□□□□ -0.24
GABRB3-204ENST00000541819 GPATCH3Q96I76 525 aa13.54□□□□□ -0.24
GABRB3-204ENST00000541819 CHMP4AQ9BY43 222 aa13.54□□□□□ -0.24
GABRB3-204ENST00000541819 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
GABRB3-204ENST00000541819 SYAP1Q96A49 352 aaPredicted RBP13.54□□□□□ -0.24
GABRB3-204ENST00000541819 CEP89Q96ST8 783 aa13.54□□□□□ -0.24
GABRB3-204ENST00000541819 GOLGA6L1Q8N7Z2 621 aa13.54□□□□□ -0.24
GABRB3-204ENST00000541819 RASSF8Q8NHQ8 419 aa13.54□□□□□ -0.24
GABRB3-204ENST00000541819 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
GABRB3-204ENST00000541819 ERCC6Q03468 1493 aa13.52□□□□□ -0.24
GABRB3-204ENST00000541819 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.25
GABRB3-204ENST00000541819 USP35Q9P2H5 1018 aa13.51□□□□□ -0.25
GABRB3-204ENST00000541819 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
GABRB3-204ENST00000541819 CHMP3Q9Y3E7 222 aa13.51□□□□□ -0.25
GABRB3-204ENST00000541819 EEA1Q15075 1411 aa13.5□□□□□ -0.25
GABRB3-204ENST00000541819 HDAC5Q9UQL6 1122 aa13.49□□□□□ -0.25
GABRB3-204ENST00000541819 CSPP1Q1MSJ5 1256 aa13.49□□□□□ -0.25
GABRB3-204ENST00000541819 SPAG9O60271 1321 aaKnown RBP13.48□□□□□ -0.25
GABRB3-204ENST00000541819 VPS53Q5VIR6 699 aa13.48□□□□□ -0.25
GABRB3-204ENST00000541819 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
GABRB3-204ENST00000541819 ITPRIPQ8IWB1 547 aa13.48□□□□□ -0.25
GABRB3-204ENST00000541819 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
GABRB3-204ENST00000541819 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
GABRB3-204ENST00000541819 STK26Q9P289 416 aa13.48□□□□□ -0.25
GABRB3-204ENST00000541819 MARCH6O60337 910 aa13.47□□□□□ -0.25
GABRB3-204ENST00000541819 TNNT3P45378 269 aaPredicted RBP13.47□□□□□ -0.25
GABRB3-204ENST00000541819 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
GABRB3-204ENST00000541819 CEP162Q5TB80 1403 aa13.46□□□□□ -0.25
GABRB3-204ENST00000541819 TPM3P06753 285 aa13.46□□□□□ -0.26
GABRB3-204ENST00000541819 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
GABRB3-204ENST00000541819 CREBRFQ8IUR6 639 aa13.45□□□□□ -0.26
GABRB3-204ENST00000541819 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
GABRB3-204ENST00000541819 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
GABRB3-204ENST00000541819 HMMRO75330 724 aa13.43□□□□□ -0.26
GABRB3-204ENST00000541819 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-204ENST00000541819 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
GABRB3-204ENST00000541819 TOMM22Q9NS69 142 aa13.42□□□□□ -0.26
GABRB3-204ENST00000541819 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
GABRB3-204ENST00000541819 U2AF1L5P0DN76 240 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-204ENST00000541819 U2AF1Q01081 240 aaKnown RBP eCLIP13.42□□□□□ -0.26
GABRB3-204ENST00000541819 GGT6Q6P531 493 aa13.41□□□□□ -0.26
GABRB3-204ENST00000541819 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-204ENST00000541819 PMFBP1Q8TBY8 1022 aa13.4□□□□□ -0.26
GABRB3-204ENST00000541819 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
GABRB3-204ENST00000541819 KIF3AQ9Y496 699 aa13.4□□□□□ -0.26
GABRB3-204ENST00000541819 ARID3AQ99856 593 aa13.38□□□□□ -0.27
GABRB3-204ENST00000541819 GZF1Q9H116 711 aaPredicted RBP13.38□□□□□ -0.27
GABRB3-204ENST00000541819 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
GABRB3-204ENST00000541819 TPM2P07951 284 aa13.37□□□□□ -0.27
GABRB3-204ENST00000541819 TPD52L1Q16890 204 aaPredicted RBP13.37□□□□□ -0.27
GABRB3-204ENST00000541819 CEP164Q9UPV0 1460 aa13.37□□□□□ -0.27
GABRB3-204ENST00000541819 PHF14O94880 888 aa13.37□□□□□ -0.27
GABRB3-204ENST00000541819 TCEAL9Q9UHQ7 104 aa13.37□□□□□ -0.27
GABRB3-204ENST00000541819 KIF16BQ96L93 1317 aa13.37□□□□□ -0.27
GABRB3-204ENST00000541819 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
GABRB3-204ENST00000541819 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
GABRB3-204ENST00000541819 TCERG1O14776 1098 aaKnown RBP13.36□□□□□ -0.27
GABRB3-204ENST00000541819 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
GABRB3-204ENST00000541819 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
GABRB3-204ENST00000541819 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
GABRB3-204ENST00000541819 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
GABRB3-204ENST00000541819 DEKP35659 375 aaKnown RBP13.36□□□□□ -0.27
GABRB3-204ENST00000541819 CTDP1Q9Y5B0 961 aaPredicted RBP13.35□□□□□ -0.27
GABRB3-204ENST00000541819 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
GABRB3-204ENST00000541819 LMOD3Q0VAK6 560 aa13.35□□□□□ -0.27
GABRB3-204ENST00000541819 SLKQ9H2G2 1235 aaPredicted RBP13.35□□□□□ -0.27
GABRB3-204ENST00000541819 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
GABRB3-204ENST00000541819 SLC4A10Q6U841 1118 aa13.34□□□□□ -0.27
GABRB3-204ENST00000541819 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
GABRB3-204ENST00000541819 BAZ1BQ9UIG0 1483 aaKnown RBP13.34□□□□□ -0.27
GABRB3-204ENST00000541819 GOLGA6L3A6NEY3 463 aa13.34□□□□□ -0.27
GABRB3-204ENST00000541819 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
GABRB3-204ENST00000541819 TRIM34Q9BYJ4 488 aa13.34□□□□□ -0.27
GABRB3-204ENST00000541819 ROCK2O75116 1388 aaKnown RBP13.34□□□□□ -0.27
GABRB3-204ENST00000541819 CHMP4CQ96CF2 233 aa13.33□□□□□ -0.28
GABRB3-204ENST00000541819 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.33□□□□□ -0.28
GABRB3-204ENST00000541819 AKAP17AQ02040 695 aaKnown RBP13.33□□□□□ -0.28
GABRB3-204ENST00000541819 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.28
GABRB3-204ENST00000541819 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
GABRB3-204ENST00000541819 AMOTL1Q8IY63 956 aa13.32□□□□□ -0.28
GABRB3-204ENST00000541819 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
GABRB3-204ENST00000541819 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
GABRB3-204ENST00000541819 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
GABRB3-204ENST00000541819 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
GABRB3-204ENST00000541819 RALBP1Q15311 655 aa13.32□□□□□ -0.28
GABRB3-204ENST00000541819 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
GABRB3-204ENST00000541819 H3BQV1 296 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms