RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 JPH4Q96JJ6 628 aa20.66■□□□□ 0.9
VARS2-211ENST00000541562 DCAF11Q8TEB1 546 aa20.66■□□□□ 0.9
VARS2-211ENST00000541562 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
VARS2-211ENST00000541562 MYT1LQ9UL68 1186 aa20.65■□□□□ 0.9
VARS2-211ENST00000541562 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
VARS2-211ENST00000541562 KIF7Q2M1P5 1343 aa20.64■□□□□ 0.9
VARS2-211ENST00000541562 PLB1Q6P1J6 1458 aa20.63■□□□□ 0.89
VARS2-211ENST00000541562 CUL7Q14999 1698 aa20.63■□□□□ 0.89
VARS2-211ENST00000541562 PLEKHD1A6NEE1 506 aa20.62■□□□□ 0.89
VARS2-211ENST00000541562 CARD11Q9BXL7 1154 aa20.61■□□□□ 0.89
VARS2-211ENST00000541562 SUPT6HQ7KZ85 1726 aaKnown RBP20.59■□□□□ 0.89
VARS2-211ENST00000541562 DENND4BO75064 1496 aaPredicted RBP20.58■□□□□ 0.89
VARS2-211ENST00000541562 TSPY4P0CV99 314 aa20.57■□□□□ 0.88
VARS2-211ENST00000541562 TSPY10P0CW01 314 aa20.57■□□□□ 0.88
VARS2-211ENST00000541562 NUP155O75694 1391 aa20.57■□□□□ 0.88
VARS2-211ENST00000541562 CCDC7Q96M83 1385 aa20.55■□□□□ 0.88
VARS2-211ENST00000541562 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
VARS2-211ENST00000541562 EHBP1L1Q8N3D4 1523 aa20.54■□□□□ 0.88
VARS2-211ENST00000541562 ABCC5O15440 1437 aa20.54■□□□□ 0.88
VARS2-211ENST00000541562 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
VARS2-211ENST00000541562 TMC1Q8TDI8 760 aa20.54■□□□□ 0.88
VARS2-211ENST00000541562 UGGT2Q9NYU1 1516 aa20.54■□□□□ 0.88
VARS2-211ENST00000541562 IQGAP2Q13576 1575 aa20.54■□□□□ 0.88
VARS2-211ENST00000541562 ERICH6Q7L0X2 663 aa20.52■□□□□ 0.88
VARS2-211ENST00000541562 DAPK1P53355 1430 aa20.52■□□□□ 0.88
VARS2-211ENST00000541562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.52■□□□□ 0.87
VARS2-211ENST00000541562 CC2D1BQ5T0F9 858 aaKnown RBP20.51■□□□□ 0.87
VARS2-211ENST00000541562 ANP32EQ9BTT0 268 aa20.5■□□□□ 0.87
VARS2-211ENST00000541562 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
VARS2-211ENST00000541562 ANKRD30BQ9BXX2 1392 aa20.49■□□□□ 0.87
VARS2-211ENST00000541562 NBPF1Q3BBV0 1214 aa20.47■□□□□ 0.87
VARS2-211ENST00000541562 MSH5O43196 834 aa20.46■□□□□ 0.87
VARS2-211ENST00000541562 NUP153P49790 1475 aaKnown RBP20.45■□□□□ 0.87
VARS2-211ENST00000541562 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
VARS2-211ENST00000541562 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
VARS2-211ENST00000541562 USP47Q96K76 1375 aa20.44■□□□□ 0.86
VARS2-211ENST00000541562 AKNAQ7Z591 1439 aa20.43■□□□□ 0.86
VARS2-211ENST00000541562 CNTLNQ9NXG0 1405 aa20.43■□□□□ 0.86
VARS2-211ENST00000541562 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
VARS2-211ENST00000541562 NPM2Q86SE8 214 aaKnown RBP20.43■□□□□ 0.86
VARS2-211ENST00000541562 HECW1Q76N89 1606 aa20.42■□□□□ 0.86
VARS2-211ENST00000541562 SKAP1Q86WV1 359 aa20.41■□□□□ 0.86
VARS2-211ENST00000541562 DISP1Q96F81 1524 aa20.4■□□□□ 0.86
VARS2-211ENST00000541562 NBR1Q14596 966 aa20.39■□□□□ 0.86
VARS2-211ENST00000541562 ARHGEF11O15085 1522 aa20.38■□□□□ 0.85
VARS2-211ENST00000541562 CCDC136Q96JN2 1154 aa20.37■□□□□ 0.85
VARS2-211ENST00000541562 WDR62O43379 1518 aa20.37■□□□□ 0.85
VARS2-211ENST00000541562 PLIN1O60240 522 aa20.35■□□□□ 0.85
VARS2-211ENST00000541562 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
VARS2-211ENST00000541562 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
VARS2-211ENST00000541562 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
VARS2-211ENST00000541562 ANKRD50Q9ULJ7 1429 aa20.34■□□□□ 0.85
VARS2-211ENST00000541562 PPP4R2Q9NY27 417 aa20.34■□□□□ 0.85
VARS2-211ENST00000541562 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
VARS2-211ENST00000541562 CAMSAP2Q08AD1 1489 aa20.33■□□□□ 0.85
VARS2-211ENST00000541562 NCOA1Q15788 1441 aa20.33■□□□□ 0.85
VARS2-211ENST00000541562 MIA2Q96PC5 1412 aa20.33■□□□□ 0.85
VARS2-211ENST00000541562 KIAA0586Q9BVV6 1533 aa20.33■□□□□ 0.85
VARS2-211ENST00000541562 CDCA7LQ96GN5 454 aa20.31■□□□□ 0.84
VARS2-211ENST00000541562 KIF14Q15058 1648 aa20.3■□□□□ 0.84
VARS2-211ENST00000541562 TROQ12816 1431 aaPredicted RBP20.3■□□□□ 0.84
VARS2-211ENST00000541562 RPRD2Q5VT52 1461 aaKnown RBP20.3■□□□□ 0.84
VARS2-211ENST00000541562 GPATCH8Q9UKJ3 1502 aaKnown RBP20.3■□□□□ 0.84
VARS2-211ENST00000541562 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
VARS2-211ENST00000541562 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
VARS2-211ENST00000541562 TCOF1Q13428 1488 aaKnown RBP20.28■□□□□ 0.84
VARS2-211ENST00000541562 KIF15Q9NS87 1388 aa20.28■□□□□ 0.84
VARS2-211ENST00000541562 IFT140Q96RY7 1462 aa20.28■□□□□ 0.84
VARS2-211ENST00000541562 CARMIL2Q6F5E8 1435 aa20.26■□□□□ 0.83
VARS2-211ENST00000541562 PZPP20742 1482 aa20.25■□□□□ 0.83
VARS2-211ENST00000541562 ZBED9Q6R2W3 1325 aa20.25■□□□□ 0.83
VARS2-211ENST00000541562 KIAA0556O60303 1618 aa20.24■□□□□ 0.83
VARS2-211ENST00000541562 PTPRGP23470 1445 aa20.23■□□□□ 0.83
VARS2-211ENST00000541562 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
VARS2-211ENST00000541562 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
VARS2-211ENST00000541562 TEX14Q8IWB6 1497 aa20.22■□□□□ 0.83
VARS2-211ENST00000541562 NUTM2DQ5VT03 806 aaPredicted RBP20.22■□□□□ 0.83
VARS2-211ENST00000541562 KIAA1107Q9UPP5 1409 aa20.22■□□□□ 0.83
VARS2-211ENST00000541562 EIF4G3O43432 1585 aaKnown RBP20.22■□□□□ 0.83
VARS2-211ENST00000541562 C9orf84Q5VXU9 1444 aa20.22■□□□□ 0.83
VARS2-211ENST00000541562 EXOC6Q8TAG9 804 aa20.21■□□□□ 0.83
VARS2-211ENST00000541562 PANK3Q9H999 370 aa20.21■□□□□ 0.83
VARS2-211ENST00000541562 RAPGEF6Q8TEU7 1601 aa20.21■□□□□ 0.83
VARS2-211ENST00000541562 MYT1Q01538 1121 aa20.21■□□□□ 0.83
VARS2-211ENST00000541562 PNISRQ8TF01 805 aaKnown RBP20.2■□□□□ 0.82
VARS2-211ENST00000541562 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
VARS2-211ENST00000541562 ATP10BO94823 1461 aa20.18■□□□□ 0.82
VARS2-211ENST00000541562 PAK3O75914 559 aaPredicted RBP20.17■□□□□ 0.82
VARS2-211ENST00000541562 ROCK1Q13464 1354 aa20.17■□□□□ 0.82
VARS2-211ENST00000541562 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
VARS2-211ENST00000541562 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
VARS2-211ENST00000541562 DHX29Q7Z478 1369 aaKnown RBP20.16■□□□□ 0.82
VARS2-211ENST00000541562 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
VARS2-211ENST00000541562 GCC2Q8IWJ2 1684 aa20.13■□□□□ 0.81
VARS2-211ENST00000541562 NEUROD2Q15784 382 aa20.13■□□□□ 0.81
VARS2-211ENST00000541562 DNMT1P26358 1616 aaKnown RBP20.11■□□□□ 0.81
VARS2-211ENST00000541562 SYNJ2O15056 1496 aa20.1■□□□□ 0.81
VARS2-211ENST00000541562 MAGI1Q96QZ7 1491 aaPredicted RBP20.1■□□□□ 0.81
VARS2-211ENST00000541562 BCORL1Q5H9F3 1711 aa20.08■□□□□ 0.81
VARS2-211ENST00000541562 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms