RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CCDC70Q6NSX1 233 aa19.29■□□□□ 0.68
HMGA2-210ENST00000541363 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
HMGA2-210ENST00000541363 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
HMGA2-210ENST00000541363 GPS2Q13227 327 aa19.28■□□□□ 0.68
HMGA2-210ENST00000541363 TSR1Q2NL82 804 aaKnown RBP19.28■□□□□ 0.68
HMGA2-210ENST00000541363 RTF1Q92541 710 aaKnown RBP19.28■□□□□ 0.68
HMGA2-210ENST00000541363 GPATCH3Q96I76 525 aa19.27■□□□□ 0.68
HMGA2-210ENST00000541363 GOLGA6L3A6NEY3 463 aa19.27■□□□□ 0.68
HMGA2-210ENST00000541363 FBXO3Q9UK99 471 aa19.27■□□□□ 0.68
HMGA2-210ENST00000541363 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
HMGA2-210ENST00000541363 CC2D1BQ5T0F9 858 aaKnown RBP19.26■□□□□ 0.67
HMGA2-210ENST00000541363 ABCC9O60706 1549 aa19.25■□□□□ 0.67
HMGA2-210ENST00000541363 TPD52L1Q16890 204 aaPredicted RBP19.22■□□□□ 0.67
HMGA2-210ENST00000541363 IPO8O15397 1037 aaKnown RBP19.22■□□□□ 0.67
HMGA2-210ENST00000541363 TPM2P07951 284 aa19.22■□□□□ 0.67
HMGA2-210ENST00000541363 HSP90AA2PQ14568 343 aaPredicted RBP19.22■□□□□ 0.67
HMGA2-210ENST00000541363 CALD1Q05682 793 aaKnown RBP19.21■□□□□ 0.67
HMGA2-210ENST00000541363 VPS53Q5VIR6 699 aa19.21■□□□□ 0.67
HMGA2-210ENST00000541363 ANO8Q9HCE9 1232 aaPredicted RBP19.21■□□□□ 0.67
HMGA2-210ENST00000541363 APBB1O00213 710 aa19.2■□□□□ 0.66
HMGA2-210ENST00000541363 PES1O00541 588 aaKnown RBP19.2■□□□□ 0.66
HMGA2-210ENST00000541363 GORABQ5T7V8 394 aa19.2■□□□□ 0.66
HMGA2-210ENST00000541363 MARCH6O60337 910 aa19.2■□□□□ 0.66
HMGA2-210ENST00000541363 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
HMGA2-210ENST00000541363 KCNH8Q96L42 1107 aa19.18■□□□□ 0.66
HMGA2-210ENST00000541363 G3V3G9 751 aa19.17■□□□□ 0.66
HMGA2-210ENST00000541363 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
HMGA2-210ENST00000541363 TPM1P09493 284 aa19.17■□□□□ 0.66
HMGA2-210ENST00000541363 CCAR2Q8N163 923 aaKnown RBP19.17■□□□□ 0.66
HMGA2-210ENST00000541363 ZNF771Q7L3S4 317 aaPredicted RBP19.17■□□□□ 0.66
HMGA2-210ENST00000541363 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
HMGA2-210ENST00000541363 TAF7LQ5H9L4 462 aa19.14■□□□□ 0.66
HMGA2-210ENST00000541363 TEX35Q5T0J7 233 aa19.14■□□□□ 0.65
HMGA2-210ENST00000541363 SLKQ9H2G2 1235 aaPredicted RBP19.14■□□□□ 0.65
HMGA2-210ENST00000541363 KIF3AQ9Y496 699 aa19.14■□□□□ 0.65
HMGA2-210ENST00000541363 SF3A1Q15459 793 aaKnown RBP19.13■□□□□ 0.65
HMGA2-210ENST00000541363 TRIM6-TRIM34B2RNG4 842 aa19.12■□□□□ 0.65
HMGA2-210ENST00000541363 RWDD1Q9H446 243 aaPredicted RBP19.11■□□□□ 0.65
HMGA2-210ENST00000541363 CHMP3Q9Y3E7 222 aa19.11■□□□□ 0.65
HMGA2-210ENST00000541363 TMF1P82094 1093 aa19.11■□□□□ 0.65
HMGA2-210ENST00000541363 GOLGA6L19H0YKK7 550 aa19.1■□□□□ 0.65
HMGA2-210ENST00000541363 TCERG1O14776 1098 aaKnown RBP19.1■□□□□ 0.65
HMGA2-210ENST00000541363 KIF16BQ96L93 1317 aa19.1■□□□□ 0.65
HMGA2-210ENST00000541363 SOX12O15370 315 aa19.1■□□□□ 0.65
HMGA2-210ENST00000541363 WWC1Q8IX03 1113 aa19.1■□□□□ 0.65
HMGA2-210ENST00000541363 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
HMGA2-210ENST00000541363 CHMP4AQ9BY43 222 aa19.09■□□□□ 0.65
HMGA2-210ENST00000541363 ZNF330Q9Y3S2 320 aaPredicted RBP19.09■□□□□ 0.65
HMGA2-210ENST00000541363 ITPRIPQ8IWB1 547 aa19.08■□□□□ 0.65
HMGA2-210ENST00000541363 RSPH6AQ9H0K4 717 aa19.08■□□□□ 0.64
HMGA2-210ENST00000541363 NOM1Q5C9Z4 860 aaKnown RBP19.08■□□□□ 0.64
HMGA2-210ENST00000541363 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
HMGA2-210ENST00000541363 HDGFP51858 240 aaKnown RBP19.08■□□□□ 0.64
HMGA2-210ENST00000541363 HMMRO75330 724 aa19.07■□□□□ 0.64
HMGA2-210ENST00000541363 MORC1Q86VD1 984 aa19.07■□□□□ 0.64
HMGA2-210ENST00000541363 HDAC5Q9UQL6 1122 aa19.07■□□□□ 0.64
HMGA2-210ENST00000541363 TCEAL9Q9UHQ7 104 aa19.07■□□□□ 0.64
HMGA2-210ENST00000541363 PMFBP1Q8TBY8 1022 aa19.06■□□□□ 0.64
HMGA2-210ENST00000541363 SRPK2P78362 688 aaKnown RBP19.06■□□□□ 0.64
HMGA2-210ENST00000541363 H3BQV1 296 aa19.05■□□□□ 0.64
HMGA2-210ENST00000541363 IFFO2Q5TF58 517 aa19.05■□□□□ 0.64
HMGA2-210ENST00000541363 MFAP1P55081 439 aaKnown RBP19.04■□□□□ 0.64
HMGA2-210ENST00000541363 CDR1P51861 262 aa19.04■□□□□ 0.64
HMGA2-210ENST00000541363 ST18O60284 1047 aa19.04■□□□□ 0.64
HMGA2-210ENST00000541363 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.03■□□□□ 0.64
HMGA2-210ENST00000541363 AK7Q96M32 723 aa19.03■□□□□ 0.64
HMGA2-210ENST00000541363 DDX11L8A8MPP1 907 aa19.02■□□□□ 0.64
HMGA2-210ENST00000541363 RBM19Q9Y4C8 960 aaKnown RBP19.02■□□□□ 0.64
HMGA2-210ENST00000541363 IPO7O95373 1038 aaKnown RBP19.02■□□□□ 0.64
HMGA2-210ENST00000541363 RUFY1Q96T51 708 aa19.02■□□□□ 0.63
HMGA2-210ENST00000541363 CHMP4CQ96CF2 233 aa19.01■□□□□ 0.63
HMGA2-210ENST00000541363 PCMTD1Q96MG8 357 aaPredicted RBP19.01■□□□□ 0.63
HMGA2-210ENST00000541363 MAP7D2Q96T17 732 aa19.01■□□□□ 0.63
HMGA2-210ENST00000541363 TOMM22Q9NS69 142 aa19.01■□□□□ 0.63
HMGA2-210ENST00000541363 BECN2A8MW95 431 aa19■□□□□ 0.63
HMGA2-210ENST00000541363 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
HMGA2-210ENST00000541363 AKAP17AQ02040 695 aaKnown RBP19■□□□□ 0.63
HMGA2-210ENST00000541363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.99■□□□□ 0.63
HMGA2-210ENST00000541363 KANK1Q14678 1352 aa18.99■□□□□ 0.63
HMGA2-210ENST00000541363 NOL8Q76FK4 1167 aaKnown RBP18.98■□□□□ 0.63
HMGA2-210ENST00000541363 FRAT2O75474 233 aaPredicted RBP18.98■□□□□ 0.63
HMGA2-210ENST00000541363 STK31Q9BXU1 1019 aa18.98■□□□□ 0.63
HMGA2-210ENST00000541363 ANKRD20A12PQ8NF67 263 aa18.98■□□□□ 0.63
HMGA2-210ENST00000541363 ZNF592Q92610 1267 aa18.97■□□□□ 0.63
HMGA2-210ENST00000541363 VSIG10Q8N0Z9 540 aa18.97■□□□□ 0.63
HMGA2-210ENST00000541363 FAM184AQ8NB25 1140 aa18.97■□□□□ 0.63
HMGA2-210ENST00000541363 CFDP1Q9UEE9 299 aaPredicted RBP18.97■□□□□ 0.63
HMGA2-210ENST00000541363 CCDC191Q8NCU4 936 aa18.97■□□□□ 0.63
HMGA2-210ENST00000541363 CSB-PGBD3P0DP91 1061 aa18.96■□□□□ 0.63
HMGA2-210ENST00000541363 CLIP1P30622 1438 aa18.96■□□□□ 0.63
HMGA2-210ENST00000541363 HDGFL2Q7Z4V5 671 aaPredicted RBP18.96■□□□□ 0.63
HMGA2-210ENST00000541363 CCDC47Q96A33 483 aaKnown RBP18.96■□□□□ 0.62
HMGA2-210ENST00000541363 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.62
HMGA2-210ENST00000541363 ATP6V1DQ9Y5K8 247 aa18.95■□□□□ 0.62
HMGA2-210ENST00000541363 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
HMGA2-210ENST00000541363 ACBD3Q9H3P7 528 aa18.95■□□□□ 0.62
HMGA2-210ENST00000541363 PAK3O75914 559 aaPredicted RBP18.93■□□□□ 0.62
HMGA2-210ENST00000541363 DCTN1Q14203 1278 aa18.93■□□□□ 0.62
HMGA2-210ENST00000541363 HOOK1Q9UJC3 728 aaKnown RBP18.92■□□□□ 0.62
HMGA2-210ENST00000541363 KTN1Q86UP2 1357 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms