RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 ADGBQ8N7X0 1667 aa21.55■■□□□ 1.04
SPOCK3-226ENST00000541354 CAMSAP2Q08AD1 1489 aa21.55■■□□□ 1.04
SPOCK3-226ENST00000541354 ZCCHC11Q5TAX3 1644 aaKnown RBP21.54■■□□□ 1.04
SPOCK3-226ENST00000541354 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
SPOCK3-226ENST00000541354 ARHGEF5Q12774 1597 aa21.53■■□□□ 1.04
SPOCK3-226ENST00000541354 ADGRL2O95490 1459 aa21.52■■□□□ 1.04
SPOCK3-226ENST00000541354 ITGAEP38570 1179 aa21.5■■□□□ 1.03
SPOCK3-226ENST00000541354 ABCC5O15440 1437 aa21.5■■□□□ 1.03
SPOCK3-226ENST00000541354 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
SPOCK3-226ENST00000541354 MAPKBP1O60336 1514 aa21.49■■□□□ 1.03
SPOCK3-226ENST00000541354 ARAP3Q8WWN8 1544 aa21.49■■□□□ 1.03
SPOCK3-226ENST00000541354 CFDP1Q9UEE9 299 aaPredicted RBP21.46■■□□□ 1.03
SPOCK3-226ENST00000541354 TIMELESSQ9UNS1 1208 aa21.46■■□□□ 1.03
SPOCK3-226ENST00000541354 MYO5CQ9NQX4 1742 aa21.46■■□□□ 1.03
SPOCK3-226ENST00000541354 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.03
SPOCK3-226ENST00000541354 CDC42BPBQ9Y5S2 1711 aa21.44■■□□□ 1.02
SPOCK3-226ENST00000541354 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
SPOCK3-226ENST00000541354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.43■■□□□ 1.02
SPOCK3-226ENST00000541354 RSPH4AQ5TD94 716 aa21.43■■□□□ 1.02
SPOCK3-226ENST00000541354 MAST1Q9Y2H9 1570 aa21.41■■□□□ 1.02
SPOCK3-226ENST00000541354 TTC37Q6PGP7 1564 aa21.39■■□□□ 1.02
SPOCK3-226ENST00000541354 KIAA1107Q9UPP5 1409 aa21.39■■□□□ 1.01
SPOCK3-226ENST00000541354 SAMD9LQ8IVG5 1584 aa21.37■■□□□ 1.01
SPOCK3-226ENST00000541354 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
SPOCK3-226ENST00000541354 NCOA1Q15788 1441 aa21.35■■□□□ 1.01
SPOCK3-226ENST00000541354 MBD5Q9P267 1494 aa21.34■■□□□ 1.01
SPOCK3-226ENST00000541354 WDR7Q9Y4E6 1490 aa21.34■■□□□ 1.01
SPOCK3-226ENST00000541354 PLCH2O75038 1416 aa21.34■■□□□ 1.01
SPOCK3-226ENST00000541354 ANKRD30AQ9BXX3 1397 aa21.34■■□□□ 1.01
SPOCK3-226ENST00000541354 CCDC141Q6ZP82 1450 aa21.34■■□□□ 1.01
SPOCK3-226ENST00000541354 ABCA9Q8IUA7 1624 aa21.32■■□□□ 1
SPOCK3-226ENST00000541354 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
SPOCK3-226ENST00000541354 ZNF644Q9H582 1327 aaPredicted RBP21.3■■□□□ 1
SPOCK3-226ENST00000541354 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
SPOCK3-226ENST00000541354 PLXNC1O60486 1568 aa21.29■■□□□ 1
SPOCK3-226ENST00000541354 KDM6BO15054 1643 aa21.27■■□□□ 1
SPOCK3-226ENST00000541354 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
SPOCK3-226ENST00000541354 KDM5DQ9BY66 1539 aa21.27■□□□□ 0.99
SPOCK3-226ENST00000541354 ABCC1P33527 1531 aa21.24■□□□□ 0.99
SPOCK3-226ENST00000541354 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
SPOCK3-226ENST00000541354 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
SPOCK3-226ENST00000541354 SYCP2Q9BX26 1530 aa21.21■□□□□ 0.99
SPOCK3-226ENST00000541354 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
SPOCK3-226ENST00000541354 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
SPOCK3-226ENST00000541354 CHIC2Q9UKJ5 165 aa21.21■□□□□ 0.99
SPOCK3-226ENST00000541354 CFAP74Q9C0B2 1584 aa21.21■□□□□ 0.99
SPOCK3-226ENST00000541354 EFCAB2Q5VUJ9 269 aa21.2■□□□□ 0.98
SPOCK3-226ENST00000541354 ASXL2Q76L83 1435 aa21.19■□□□□ 0.98
SPOCK3-226ENST00000541354 ANKRD50Q9ULJ7 1429 aa21.18■□□□□ 0.98
SPOCK3-226ENST00000541354 ZNF777Q9ULD5 760 aaPredicted RBP21.18■□□□□ 0.98
SPOCK3-226ENST00000541354 DENND4BO75064 1496 aaPredicted RBP21.18■□□□□ 0.98
SPOCK3-226ENST00000541354 RTEL1-TNFRSF6BF6WH68 1400 aa21.18■□□□□ 0.98
SPOCK3-226ENST00000541354 PZPP20742 1482 aa21.14■□□□□ 0.97
SPOCK3-226ENST00000541354 DUOX2Q9NRD8 1548 aa21.14■□□□□ 0.97
SPOCK3-226ENST00000541354 NPM1P06748 294 aaKnown RBP eCLIP21.14■□□□□ 0.97
SPOCK3-226ENST00000541354 MIER1Q8N108 512 aa21.14■□□□□ 0.97
SPOCK3-226ENST00000541354 UNC13BO14795 1591 aa21.13■□□□□ 0.97
SPOCK3-226ENST00000541354 MPHOSPH9Q99550 1183 aa21.13■□□□□ 0.97
SPOCK3-226ENST00000541354 KIF15Q9NS87 1388 aa21.12■□□□□ 0.97
SPOCK3-226ENST00000541354 ERBINQ96RT1 1412 aa21.11■□□□□ 0.97
SPOCK3-226ENST00000541354 ARHGEF12Q9NZN5 1544 aa21.1■□□□□ 0.97
SPOCK3-226ENST00000541354 HNRNPMP52272 730 aaKnown RBP eCLIP21.08■□□□□ 0.97
SPOCK3-226ENST00000541354 ANKRD30BQ9BXX2 1392 aa21.08■□□□□ 0.96
SPOCK3-226ENST00000541354 TRIM52Q96A61 297 aa21.08■□□□□ 0.96
SPOCK3-226ENST00000541354 FANCAO15360 1455 aa21.07■□□□□ 0.96
SPOCK3-226ENST00000541354 MAGI2Q86UL8 1455 aa21.07■□□□□ 0.96
SPOCK3-226ENST00000541354 GLI2P10070 1586 aa21.07■□□□□ 0.96
SPOCK3-226ENST00000541354 KCNH8Q96L42 1107 aa21.06■□□□□ 0.96
SPOCK3-226ENST00000541354 RIMBP3CA6NJZ7 1639 aa21.06■□□□□ 0.96
SPOCK3-226ENST00000541354 RIMBP3BA6NNM3 1639 aa21.06■□□□□ 0.96
SPOCK3-226ENST00000541354 RIMBP3Q9UFD9 1639 aa21.06■□□□□ 0.96
SPOCK3-226ENST00000541354 INO80Q9ULG1 1556 aaPredicted RBP21.06■□□□□ 0.96
SPOCK3-226ENST00000541354 TONSLQ96HA7 1378 aa21.06■□□□□ 0.96
SPOCK3-226ENST00000541354 RPRD2Q5VT52 1461 aaKnown RBP21.05■□□□□ 0.96
SPOCK3-226ENST00000541354 ZFYVE16Q7Z3T8 1539 aa21.04■□□□□ 0.96
SPOCK3-226ENST00000541354 PPP1R15AO75807 674 aaPredicted RBP21.03■□□□□ 0.96
SPOCK3-226ENST00000541354 IQGAP3Q86VI3 1631 aa21.03■□□□□ 0.96
SPOCK3-226ENST00000541354 EIF2AK4Q9P2K8 1649 aaKnown RBP21.02■□□□□ 0.96
SPOCK3-226ENST00000541354 SIN3AQ96ST3 1273 aa21.02■□□□□ 0.95
SPOCK3-226ENST00000541354 NEO1Q92859 1461 aa21.01■□□□□ 0.95
SPOCK3-226ENST00000541354 TRAPPC8Q9Y2L5 1435 aa20.99■□□□□ 0.95
SPOCK3-226ENST00000541354 ADGRL1O94910 1474 aa20.99■□□□□ 0.95
SPOCK3-226ENST00000541354 SLC4A1APQ9BWU0 796 aaKnown RBP20.98■□□□□ 0.95
SPOCK3-226ENST00000541354 ATP7AQ04656 1500 aa20.97■□□□□ 0.95
SPOCK3-226ENST00000541354 DEPDC5O75140 1603 aa20.97■□□□□ 0.95
SPOCK3-226ENST00000541354 MAP3K4Q9Y6R4 1608 aa20.97■□□□□ 0.95
SPOCK3-226ENST00000541354 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
SPOCK3-226ENST00000541354 KDM5CP41229 1560 aa20.96■□□□□ 0.95
SPOCK3-226ENST00000541354 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
SPOCK3-226ENST00000541354 ZNF518AQ6AHZ1 1483 aa20.95■□□□□ 0.94
SPOCK3-226ENST00000541354 CD109Q6YHK3 1445 aa20.95■□□□□ 0.94
SPOCK3-226ENST00000541354 NUP155O75694 1391 aa20.94■□□□□ 0.94
SPOCK3-226ENST00000541354 TEX14Q8IWB6 1497 aa20.93■□□□□ 0.94
SPOCK3-226ENST00000541354 SPAG9O60271 1321 aaKnown RBP20.93■□□□□ 0.94
SPOCK3-226ENST00000541354 ATP10AO60312 1499 aa20.92■□□□□ 0.94
SPOCK3-226ENST00000541354 BCORL1Q5H9F3 1711 aa20.92■□□□□ 0.94
SPOCK3-226ENST00000541354 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
SPOCK3-226ENST00000541354 SCAPERQ9BY12 1400 aa20.91■□□□□ 0.94
SPOCK3-226ENST00000541354 MLH3Q9UHC1 1453 aa20.9■□□□□ 0.94
SPOCK3-226ENST00000541354 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms