RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ABCA5Q8WWZ7 1642 aa8.47□□□□□ -1.05
SNHG1-214ENST00000540865 PBRM1Q86U86 1689 aa8.46□□□□□ -1.05
SNHG1-214ENST00000540865 PRG4Q92954 1404 aaPredicted RBP8.46□□□□□ -1.05
SNHG1-214ENST00000540865 JPH4Q96JJ6 628 aa8.46□□□□□ -1.06
SNHG1-214ENST00000540865 SHROOM2Q13796 1616 aa8.45□□□□□ -1.06
SNHG1-214ENST00000540865 ATN1P54259 1190 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-214ENST00000540865 WRNQ14191 1432 aaPredicted RBP eCLIP8.45□□□□□ -1.06
SNHG1-214ENST00000540865 MAMSTRQ6ZN01 415 aa8.44□□□□□ -1.06
SNHG1-214ENST00000540865 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
SNHG1-214ENST00000540865 KIF13AQ9H1H9 1805 aa8.44□□□□□ -1.06
SNHG1-214ENST00000540865 ADAMTS12P58397 1594 aa8.44□□□□□ -1.06
SNHG1-214ENST00000540865 CCDC61Q9Y6R9 512 aa8.43□□□□□ -1.06
SNHG1-214ENST00000540865 MAPKBP1O60336 1514 aa8.43□□□□□ -1.06
SNHG1-214ENST00000540865 PCDH10Q9P2E7 1040 aa8.42□□□□□ -1.06
SNHG1-214ENST00000540865 FAM163AQ96GL9 167 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-214ENST00000540865 SCUBE2Q9NQ36 999 aa8.41□□□□□ -1.06
SNHG1-214ENST00000540865 RTN4Q9NQC3 1192 aaKnown RBP8.41□□□□□ -1.06
SNHG1-214ENST00000540865 DIP2BQ9P265 1576 aa8.4□□□□□ -1.06
SNHG1-214ENST00000540865 TRPC6Q9Y210 931 aa8.4□□□□□ -1.06
SNHG1-214ENST00000540865 KDM6BO15054 1643 aa8.4□□□□□ -1.07
SNHG1-214ENST00000540865 PLEKHG5O94827 1062 aa8.39□□□□□ -1.07
SNHG1-214ENST00000540865 BMP2KQ9NSY1 1161 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-214ENST00000540865 ERICH3Q5RHP9 1530 aa8.39□□□□□ -1.07
SNHG1-214ENST00000540865 POTEFA5A3E0 1075 aa8.38□□□□□ -1.07
SNHG1-214ENST00000540865 KIF12Q96FN5 646 aa8.38□□□□□ -1.07
SNHG1-214ENST00000540865 ADGRL1O94910 1474 aa8.35□□□□□ -1.07
SNHG1-214ENST00000540865 SPOCK2Q92563 424 aa8.35□□□□□ -1.07
SNHG1-214ENST00000540865 ADCY10Q96PN6 1610 aa8.34□□□□□ -1.07
SNHG1-214ENST00000540865 AMER1Q5JTC6 1135 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-214ENST00000540865 MAP3K13O43283 966 aa8.33□□□□□ -1.08
SNHG1-214ENST00000540865 FBXO41Q8TF61 875 aa8.32□□□□□ -1.08
SNHG1-214ENST00000540865 ZBTB47Q9UFB7 747 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-214ENST00000540865 PTPRGP23470 1445 aa8.31□□□□□ -1.08
SNHG1-214ENST00000540865 RUSC2Q8N2Y8 1516 aa8.31□□□□□ -1.08
SNHG1-214ENST00000540865 KIAA0586Q9BVV6 1533 aa8.31□□□□□ -1.08
SNHG1-214ENST00000540865 COLQQ9Y215 455 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-214ENST00000540865 TOP2BQ02880 1626 aa8.31□□□□□ -1.08
SNHG1-214ENST00000540865 PLB1Q6P1J6 1458 aa8.31□□□□□ -1.08
SNHG1-214ENST00000540865 TIE1P35590 1138 aa8.3□□□□□ -1.08
SNHG1-214ENST00000540865 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
SNHG1-214ENST00000540865 HECW2Q9P2P5 1572 aa8.3□□□□□ -1.08
SNHG1-214ENST00000540865 TTLL13PA6NNM8 815 aa8.29□□□□□ -1.08
SNHG1-214ENST00000540865 ABCC2Q92887 1545 aa8.29□□□□□ -1.08
SNHG1-214ENST00000540865 ASXL2Q76L83 1435 aa8.29□□□□□ -1.08
SNHG1-214ENST00000540865 GLI2P10070 1586 aa8.28□□□□□ -1.08
SNHG1-214ENST00000540865 COL17A1Q9UMD9 1497 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-214ENST00000540865 SEC24BO95487 1268 aa8.28□□□□□ -1.08
SNHG1-214ENST00000540865 NUBP1P53384 320 aa8.28□□□□□ -1.08
SNHG1-214ENST00000540865 BIVM-ERCC5R4GMW8 1640 aa8.28□□□□□ -1.08
SNHG1-214ENST00000540865 TNIKQ9UKE5 1360 aa8.27□□□□□ -1.09
SNHG1-214ENST00000540865 TSPOAP1O95153 1857 aa8.26□□□□□ -1.09
SNHG1-214ENST00000540865 IGF1RP08069 1367 aa8.26□□□□□ -1.09
SNHG1-214ENST00000540865 PKD2Q13563 968 aa8.25□□□□□ -1.09
SNHG1-214ENST00000540865 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-214ENST00000540865 TRIM35Q9UPQ4 493 aa8.25□□□□□ -1.09
SNHG1-214ENST00000540865 CARMIL2Q6F5E8 1435 aa8.25□□□□□ -1.09
SNHG1-214ENST00000540865 TTBK1Q5TCY1 1321 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-214ENST00000540865 UHRF1BP1LA0JNW5 1464 aa8.25□□□□□ -1.09
SNHG1-214ENST00000540865 TEX14Q8IWB6 1497 aa8.25□□□□□ -1.09
SNHG1-214ENST00000540865 CDAN1Q8IWY9 1227 aa8.24□□□□□ -1.09
SNHG1-214ENST00000540865 EPRSP07814 1512 aaKnown RBP8.23□□□□□ -1.09
SNHG1-214ENST00000540865 UACAQ9BZF9 1416 aa8.22□□□□□ -1.09
SNHG1-214ENST00000540865 PPRC1Q5VV67 1664 aaKnown RBP8.22□□□□□ -1.09
SNHG1-214ENST00000540865 DCAF8Q5TAQ9 597 aa8.22□□□□□ -1.09
SNHG1-214ENST00000540865 KIF27Q86VH2 1401 aa8.2□□□□□ -1.1
SNHG1-214ENST00000540865 SUPT5HO00267 1087 aaKnown RBP8.2□□□□□ -1.1
SNHG1-214ENST00000540865 PCDHB13Q9Y5F0 798 aa8.2□□□□□ -1.1
SNHG1-214ENST00000540865 KDM5BQ9UGL1 1544 aa8.19□□□□□ -1.1
SNHG1-214ENST00000540865 IER5LQ5T953 404 aa8.19□□□□□ -1.1
SNHG1-214ENST00000540865 SLAIN1Q8ND83 568 aa8.19□□□□□ -1.1
SNHG1-214ENST00000540865 FAM212AQ96EL1 285 aa8.19□□□□□ -1.1
SNHG1-214ENST00000540865 ECM2O94769 699 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-214ENST00000540865 CARMIL1Q5VZK9 1371 aa8.18□□□□□ -1.1
SNHG1-214ENST00000540865 MAP3K4Q9Y6R4 1608 aa8.18□□□□□ -1.1
SNHG1-214ENST00000540865 ST18O60284 1047 aa8.17□□□□□ -1.1
SNHG1-214ENST00000540865 GSE1Q14687 1217 aa8.16□□□□□ -1.1
SNHG1-214ENST00000540865 CUL7Q14999 1698 aa8.16□□□□□ -1.1
SNHG1-214ENST00000540865 IFNL1Q8IU54 200 aa8.16□□□□□ -1.1
SNHG1-214ENST00000540865 MAGI3Q5TCQ9 1506 aa8.15□□□□□ -1.1
SNHG1-214ENST00000540865 DISP1Q96F81 1524 aa8.15□□□□□ -1.1
SNHG1-214ENST00000540865 LMTK3Q96Q04 1460 aa8.15□□□□□ -1.1
SNHG1-214ENST00000540865 WDR7Q9Y4E6 1490 aa8.15□□□□□ -1.1
SNHG1-214ENST00000540865 CD109Q6YHK3 1445 aa8.15□□□□□ -1.1
SNHG1-214ENST00000540865 SGIP1Q9BQI5 828 aa8.14□□□□□ -1.11
SNHG1-214ENST00000540865 TMEM106CQ9BVX2 250 aa8.14□□□□□ -1.11
SNHG1-214ENST00000540865 PYGBP11216 843 aa8.13□□□□□ -1.11
SNHG1-214ENST00000540865 PLCG2P16885 1265 aa8.13□□□□□ -1.11
SNHG1-214ENST00000540865 IQGAP2Q13576 1575 aa8.13□□□□□ -1.11
SNHG1-214ENST00000540865 PTPRMP28827 1452 aa8.13□□□□□ -1.11
SNHG1-214ENST00000540865 RGL2O15211 777 aa8.12□□□□□ -1.11
SNHG1-214ENST00000540865 KCNH8Q96L42 1107 aa8.11□□□□□ -1.11
SNHG1-214ENST00000540865 ZCCHC11Q5TAX3 1644 aaKnown RBP8.11□□□□□ -1.11
SNHG1-214ENST00000540865 UGGT2Q9NYU1 1516 aa8.1□□□□□ -1.11
SNHG1-214ENST00000540865 SOCS7O14512 581 aa8.1□□□□□ -1.11
SNHG1-214ENST00000540865 PHLDB1Q86UU1 1377 aa8.1□□□□□ -1.11
SNHG1-214ENST00000540865 ARAP3Q8WWN8 1544 aa8.09□□□□□ -1.11
SNHG1-214ENST00000540865 IRX5P78411 483 aaPredicted RBP8.09□□□□□ -1.11
SNHG1-214ENST00000540865 CERKQ8TCT0 537 aa8.08□□□□□ -1.12
SNHG1-214ENST00000540865 RNF25Q96BH1 459 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-214ENST00000540865 PCF11O94913 1555 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms