RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MLECQ14165 292 aa26.49■■□□□ 1.83
UBC-208ENST00000540700 FANCAO15360 1455 aa26.49■■□□□ 1.83
UBC-208ENST00000540700 POGZQ7Z3K3 1410 aa26.47■■□□□ 1.83
UBC-208ENST00000540700 CCDC18Q5T9S5 1454 aa26.44■■□□□ 1.82
UBC-208ENST00000540700 YEATS2Q9ULM3 1422 aa26.44■■□□□ 1.82
UBC-208ENST00000540700 RICTORQ6R327 1708 aa26.44■■□□□ 1.82
UBC-208ENST00000540700 CERKQ8TCT0 537 aa26.42■■□□□ 1.82
UBC-208ENST00000540700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.41■■□□□ 1.822e-10■□□□□ 10.5
UBC-208ENST00000540700 ZFYVE16Q7Z3T8 1539 aa26.4■■□□□ 1.82
UBC-208ENST00000540700 TTC37Q6PGP7 1564 aa26.37■■□□□ 1.81
UBC-208ENST00000540700 CFAP74Q9C0B2 1584 aa26.37■■□□□ 1.81
UBC-208ENST00000540700 ZMYM4Q5VZL5 1548 aa26.36■■□□□ 1.81
UBC-208ENST00000540700 TIAM1Q13009 1591 aa26.36■■□□□ 1.81
UBC-208ENST00000540700 SIGLEC1Q9BZZ2 1709 aa26.35■■□□□ 1.81
UBC-208ENST00000540700 TROQ12816 1431 aaPredicted RBP26.32■■□□□ 1.8
UBC-208ENST00000540700 SCAPERQ9BY12 1400 aa26.32■■□□□ 1.8
UBC-208ENST00000540700 MAGI2Q86UL8 1455 aa26.31■■□□□ 1.8
UBC-208ENST00000540700 MAP3K1Q13233 1512 aa26.29■■□□□ 1.8
UBC-208ENST00000540700 KIF14Q15058 1648 aa26.28■■□□□ 1.8
UBC-208ENST00000540700 CEBPAP49715 358 aaPredicted RBP26.28■■□□□ 1.8
UBC-208ENST00000540700 KANK4Q5T7N3 995 aaPredicted RBP26.27■■□□□ 1.8
UBC-208ENST00000540700 PLCH2O75038 1416 aa26.26■■□□□ 1.79
UBC-208ENST00000540700 FER1L4A9Z1Z3 1794 aa26.25■■□□□ 1.79
UBC-208ENST00000540700 CDK11AQ9UQ88 783 aaPredicted RBP26.25■■□□□ 1.79
UBC-208ENST00000540700 LRRC9Q6ZRR7 1453 aa26.24■■□□□ 1.79
UBC-208ENST00000540700 ATP10AO60312 1499 aa26.23■■□□□ 1.79
UBC-208ENST00000540700 EHBP1L1Q8N3D4 1523 aa26.22■■□□□ 1.79
UBC-208ENST00000540700 MTUS2Q5JR59 1369 aa26.21■■□□□ 1.79
UBC-208ENST00000540700 EFCAB2Q5VUJ9 269 aa26.21■■□□□ 1.79
UBC-208ENST00000540700 C9orf84Q5VXU9 1444 aa26.21■■□□□ 1.79
UBC-208ENST00000540700 ARHGEF12Q9NZN5 1544 aa26.2■■□□□ 1.79
UBC-208ENST00000540700 MYT1LQ9UL68 1186 aa26.18■■□□□ 1.78
UBC-208ENST00000540700 DISP3Q9P2K9 1392 aa26.18■■□□□ 1.78
UBC-208ENST00000540700 ILDR2Q71H61 639 aa26.14■■□□□ 1.78
UBC-208ENST00000540700 AFAP1Q8N556 730 aa26.14■■□□□ 1.78
UBC-208ENST00000540700 DMRT2Q9Y5R5 561 aa26.14■■□□□ 1.78
UBC-208ENST00000540700 APLP2Q06481 763 aa26.13■■□□□ 1.77
UBC-208ENST00000540700 PREX1Q8TCU6 1659 aa26.12■■□□□ 1.77
UBC-208ENST00000540700 UHRF1BP1Q6BDS2 1440 aa26.1■■□□□ 1.77
UBC-208ENST00000540700 NCOA2Q15596 1464 aa26.1■■□□□ 1.77
UBC-208ENST00000540700 PPARGC1BQ86YN6 1023 aaKnown RBP26.08■■□□□ 1.77
UBC-208ENST00000540700 ZNF518AQ6AHZ1 1483 aa26.08■■□□□ 1.77
UBC-208ENST00000540700 SUPT6HQ7KZ85 1726 aaKnown RBP26.08■■□□□ 1.76
UBC-208ENST00000540700 MYO5CQ9NQX4 1742 aa26.06■■□□□ 1.76
UBC-208ENST00000540700 ARHGAP5Q13017 1502 aa26.06■■□□□ 1.76
UBC-208ENST00000540700 GPATCH8Q9UKJ3 1502 aaKnown RBP26.04■■□□□ 1.76
UBC-208ENST00000540700 STRCQ7RTU9 1775 aa26.04■■□□□ 1.76
UBC-208ENST00000540700 CDC42BPAQ5VT25 1732 aa26.03■■□□□ 1.76
UBC-208ENST00000540700 SOCS7O14512 581 aa26.02■■□□□ 1.76
UBC-208ENST00000540700 ESF1Q9H501 851 aaKnown RBP26.02■■□□□ 1.76
UBC-208ENST00000540700 PREX2Q70Z35 1606 aa26.01■■□□□ 1.75
UBC-208ENST00000540700 CDC42BPBQ9Y5S2 1711 aa26■■□□□ 1.75
UBC-208ENST00000540700 KDM5CP41229 1560 aa25.99■■□□□ 1.75
UBC-208ENST00000540700 CCNB3Q8WWL7 1395 aa25.98■■□□□ 1.75
UBC-208ENST00000540700 DIP2CQ9Y2E4 1556 aa25.98■■□□□ 1.75
UBC-208ENST00000540700 PTPRTO14522 1441 aa25.95■■□□□ 1.74
UBC-208ENST00000540700 SETD1BQ9UPS6 1966 aaKnown RBP25.94■■□□□ 1.74
UBC-208ENST00000540700 TRAPPC8Q9Y2L5 1435 aa25.92■■□□□ 1.74
UBC-208ENST00000540700 ABCA6Q8N139 1617 aa25.92■■□□□ 1.74
UBC-208ENST00000540700 MLH3Q9UHC1 1453 aa25.91■■□□□ 1.74
UBC-208ENST00000540700 MYOM3Q5VTT5 1437 aa25.9■■□□□ 1.74
UBC-208ENST00000540700 C3P01024 1663 aa25.9■■□□□ 1.74
UBC-208ENST00000540700 ITSN2Q9NZM3 1697 aa25.9■■□□□ 1.74
UBC-208ENST00000540700 SAMD9LQ8IVG5 1584 aa25.89■■□□□ 1.73
UBC-208ENST00000540700 REREQ9P2R6 1566 aa25.89■■□□□ 1.73
UBC-208ENST00000540700 SPATA31D1Q6ZQQ2 1576 aa25.88■■□□□ 1.73
UBC-208ENST00000540700 CFDP1Q9UEE9 299 aaPredicted RBP25.87■■□□□ 1.73
UBC-208ENST00000540700 ZNF644Q9H582 1327 aaPredicted RBP25.87■■□□□ 1.73
UBC-208ENST00000540700 AGLP35573 1532 aa25.86■■□□□ 1.73
UBC-208ENST00000540700 LTBP4Q8N2S1 1624 aa25.85■■□□□ 1.73
UBC-208ENST00000540700 NCOA1Q15788 1441 aa25.84■■□□□ 1.73
UBC-208ENST00000540700 ABCC1P33527 1531 aa25.83■■□□□ 1.73
UBC-208ENST00000540700 ZNF777Q9ULD5 760 aaPredicted RBP25.83■■□□□ 1.73
UBC-208ENST00000540700 FGD6Q6ZV73 1430 aa25.81■■□□□ 1.72
UBC-208ENST00000540700 MIA2Q96PC5 1412 aa25.81■■□□□ 1.72
UBC-208ENST00000540700 CNTLNQ9NXG0 1405 aa25.81■■□□□ 1.72
UBC-208ENST00000540700 CAMSAP2Q08AD1 1489 aa25.8■■□□□ 1.72
UBC-208ENST00000540700 NCKAP5LQ9HCH0 1330 aa25.79■■□□□ 1.72
UBC-208ENST00000540700 SYCP2Q9BX26 1530 aa25.78■■□□□ 1.72
UBC-208ENST00000540700 PTPN23Q9H3S7 1636 aa25.77■■□□□ 1.72
UBC-208ENST00000540700 CAMSAP1Q5T5Y3 1602 aa25.76■■□□□ 1.71
UBC-208ENST00000540700 KIDINS220Q9ULH0 1771 aa25.75■■□□□ 1.71
UBC-208ENST00000540700 TCOF1Q13428 1488 aaKnown RBP25.75■■□□□ 1.71
UBC-208ENST00000540700 IQSEC2Q5JU85 1478 aa25.75■■□□□ 1.71
UBC-208ENST00000540700 MBD5Q9P267 1494 aa25.75■■□□□ 1.71
UBC-208ENST00000540700 ZMYM3Q14202 1370 aa25.75■■□□□ 1.71
UBC-208ENST00000540700 ZNF335Q9H4Z2 1342 aaPredicted RBP25.75■■□□□ 1.71
UBC-208ENST00000540700 KIAA1107Q9UPP5 1409 aa25.74■■□□□ 1.71
UBC-208ENST00000540700 HNRNPMP52272 730 aaKnown RBP eCLIP25.74■■□□□ 1.715e-20■■■□□ 15.9
UBC-208ENST00000540700 UBAP1LF5GYI3 381 aa25.73■■□□□ 1.71
UBC-208ENST00000540700 NPATQ14207 1427 aa25.72■■□□□ 1.71
UBC-208ENST00000540700 SPAG9O60271 1321 aaKnown RBP25.72■■□□□ 1.71
UBC-208ENST00000540700 PLEKHH2Q8IVE3 1493 aa25.71■■□□□ 1.71
UBC-208ENST00000540700 RRBP1Q9P2E9 1410 aaKnown RBP25.68■■□□□ 1.7
UBC-208ENST00000540700 GGT6Q6P531 493 aa25.65■■□□□ 1.7
UBC-208ENST00000540700 ARHGEF5Q12774 1597 aa25.65■■□□□ 1.7
UBC-208ENST00000540700 PKD2Q13563 968 aa25.63■■□□□ 1.69
UBC-208ENST00000540700 MROH2AA6NES4 1674 aa25.62■■□□□ 1.69
UBC-208ENST00000540700 CCDC141Q6ZP82 1450 aa25.62■■□□□ 1.69
UBC-208ENST00000540700 ABCC5O15440 1437 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms