RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 KIF7Q2M1P5 1343 aa21.83■■□□□ 1.09
CACFD1-206ENST00000540581 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
CACFD1-206ENST00000540581 PPP4R2Q9NY27 417 aa21.82■■□□□ 1.08
CACFD1-206ENST00000540581 BCL11AQ9H165 835 aa21.81■■□□□ 1.08
CACFD1-206ENST00000540581 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
CACFD1-206ENST00000540581 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
CACFD1-206ENST00000540581 KIF21AQ7Z4S6 1674 aa21.78■■□□□ 1.08
CACFD1-206ENST00000540581 ARHGEF11O15085 1522 aa21.76■■□□□ 1.07
CACFD1-206ENST00000540581 NCOA1Q15788 1441 aa21.76■■□□□ 1.07
CACFD1-206ENST00000540581 TCOF1Q13428 1488 aaKnown RBP21.75■■□□□ 1.07
CACFD1-206ENST00000540581 ANKRD30BQ9BXX2 1392 aa21.75■■□□□ 1.07
CACFD1-206ENST00000540581 HECW1Q76N89 1606 aa21.74■■□□□ 1.07
CACFD1-206ENST00000540581 DAPK1P53355 1430 aa21.72■■□□□ 1.07
CACFD1-206ENST00000540581 FBLN2P98095 1184 aa21.72■■□□□ 1.07
CACFD1-206ENST00000540581 GCC2Q8IWJ2 1684 aa21.71■■□□□ 1.07
CACFD1-206ENST00000540581 ZBED9Q6R2W3 1325 aa21.71■■□□□ 1.07
CACFD1-206ENST00000540581 ABCC5O15440 1437 aa21.7■■□□□ 1.07
CACFD1-206ENST00000540581 IQGAP2Q13576 1575 aa21.7■■□□□ 1.06
CACFD1-206ENST00000540581 CFDP1Q9UEE9 299 aaPredicted RBP21.7■■□□□ 1.06
CACFD1-206ENST00000540581 KDM2AQ9Y2K7 1162 aa21.7■■□□□ 1.06
CACFD1-206ENST00000540581 MIA2Q96PC5 1412 aa21.69■■□□□ 1.06
CACFD1-206ENST00000540581 FANCIQ9NVI1 1328 aa21.68■■□□□ 1.06
CACFD1-206ENST00000540581 SALL2Q9Y467 1007 aaPredicted RBP21.68■■□□□ 1.06
CACFD1-206ENST00000540581 AKNAQ7Z591 1439 aa21.68■■□□□ 1.06
CACFD1-206ENST00000540581 PKD2Q13563 968 aa21.68■■□□□ 1.06
CACFD1-206ENST00000540581 RPRD2Q5VT52 1461 aaKnown RBP21.67■■□□□ 1.06
CACFD1-206ENST00000540581 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
CACFD1-206ENST00000540581 TEX14Q8IWB6 1497 aa21.63■■□□□ 1.05
CACFD1-206ENST00000540581 WDR62O43379 1518 aa21.63■■□□□ 1.05
CACFD1-206ENST00000540581 TARBP1Q13395 1621 aaKnown RBP21.63■■□□□ 1.05
CACFD1-206ENST00000540581 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
CACFD1-206ENST00000540581 USP47Q96K76 1375 aa21.61■■□□□ 1.05
CACFD1-206ENST00000540581 NBR1Q14596 966 aa21.6■■□□□ 1.05
CACFD1-206ENST00000540581 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
CACFD1-206ENST00000540581 CCDC136Q96JN2 1154 aa21.59■■□□□ 1.05
CACFD1-206ENST00000540581 ERICH6BQ5W0A0 696 aa21.58■■□□□ 1.05
CACFD1-206ENST00000540581 SPATA31E1Q6ZUB1 1445 aa21.58■■□□□ 1.05
CACFD1-206ENST00000540581 CARD11Q9BXL7 1154 aa21.57■■□□□ 1.04
CACFD1-206ENST00000540581 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
CACFD1-206ENST00000540581 ROCK1Q13464 1354 aa21.56■■□□□ 1.04
CACFD1-206ENST00000540581 NUP153P49790 1475 aaKnown RBP21.56■■□□□ 1.04
CACFD1-206ENST00000540581 ADAMTS12P58397 1594 aa21.54■■□□□ 1.04
CACFD1-206ENST00000540581 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
CACFD1-206ENST00000540581 DHX29Q7Z478 1369 aaKnown RBP21.52■■□□□ 1.04
CACFD1-206ENST00000540581 PZPP20742 1482 aa21.52■■□□□ 1.04
CACFD1-206ENST00000540581 PAK3O75914 559 aaPredicted RBP21.52■■□□□ 1.04
CACFD1-206ENST00000540581 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
CACFD1-206ENST00000540581 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
CACFD1-206ENST00000540581 DCAF11Q8TEB1 546 aa21.5■■□□□ 1.03
CACFD1-206ENST00000540581 DNMT1P26358 1616 aaKnown RBP21.5■■□□□ 1.03
CACFD1-206ENST00000540581 PLB1Q6P1J6 1458 aa21.49■■□□□ 1.03
CACFD1-206ENST00000540581 DISP1Q96F81 1524 aa21.49■■□□□ 1.03
CACFD1-206ENST00000540581 NUP155O75694 1391 aa21.49■■□□□ 1.03
CACFD1-206ENST00000540581 CAMSAP2Q08AD1 1489 aa21.49■■□□□ 1.03
CACFD1-206ENST00000540581 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
CACFD1-206ENST00000540581 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
CACFD1-206ENST00000540581 PNISRQ8TF01 805 aaKnown RBP21.46■■□□□ 1.03
CACFD1-206ENST00000540581 ERCC6Q03468 1493 aa21.45■■□□□ 1.02
CACFD1-206ENST00000540581 BCORL1Q5H9F3 1711 aa21.45■■□□□ 1.02
CACFD1-206ENST00000540581 NPM2Q86SE8 214 aaKnown RBP21.45■■□□□ 1.02
CACFD1-206ENST00000540581 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.02
CACFD1-206ENST00000540581 SMG6Q86US8 1419 aaKnown RBP21.44■■□□□ 1.02
CACFD1-206ENST00000540581 HNRNPMP52272 730 aaKnown RBP eCLIP21.44■■□□□ 1.02
CACFD1-206ENST00000540581 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
CACFD1-206ENST00000540581 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
CACFD1-206ENST00000540581 KIAA0586Q9BVV6 1533 aa21.43■■□□□ 1.02
CACFD1-206ENST00000540581 ANKRD30AQ9BXX3 1397 aa21.42■■□□□ 1.02
CACFD1-206ENST00000540581 TROQ12816 1431 aaPredicted RBP21.42■■□□□ 1.02
CACFD1-206ENST00000540581 ANKRD50Q9ULJ7 1429 aa21.42■■□□□ 1.02
CACFD1-206ENST00000540581 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
CACFD1-206ENST00000540581 GPATCH8Q9UKJ3 1502 aaKnown RBP21.41■■□□□ 1.02
CACFD1-206ENST00000540581 PLEKHD1A6NEE1 506 aa21.4■■□□□ 1.02
CACFD1-206ENST00000540581 DEKP35659 375 aaKnown RBP21.4■■□□□ 1.02
CACFD1-206ENST00000540581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.4■■□□□ 1.02
CACFD1-206ENST00000540581 TSPY4P0CV99 314 aa21.39■■□□□ 1.02
CACFD1-206ENST00000540581 TSPY10P0CW01 314 aa21.39■■□□□ 1.02
CACFD1-206ENST00000540581 KIF14Q15058 1648 aa21.39■■□□□ 1.01
CACFD1-206ENST00000540581 EXOC6Q8TAG9 804 aa21.37■■□□□ 1.01
CACFD1-206ENST00000540581 JPH4Q96JJ6 628 aa21.36■■□□□ 1.01
CACFD1-206ENST00000540581 ANP32AP39687 249 aaKnown RBP21.36■■□□□ 1.01
CACFD1-206ENST00000540581 CC2D1BQ5T0F9 858 aaKnown RBP21.35■■□□□ 1.01
CACFD1-206ENST00000540581 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
CACFD1-206ENST00000540581 MBD5Q9P267 1494 aa21.33■■□□□ 1.01
CACFD1-206ENST00000540581 ROCK2O75116 1388 aaKnown RBP21.33■■□□□ 1.01
CACFD1-206ENST00000540581 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
CACFD1-206ENST00000540581 CDCA7LQ96GN5 454 aa21.32■■□□□ 1
CACFD1-206ENST00000540581 KIF15Q9NS87 1388 aa21.32■■□□□ 1
CACFD1-206ENST00000540581 SKAP1Q86WV1 359 aa21.31■■□□□ 1
CACFD1-206ENST00000540581 PLIN1O60240 522 aa21.31■■□□□ 1
CACFD1-206ENST00000540581 MYBBP1AQ9BQG0 1328 aaKnown RBP21.3■■□□□ 1
CACFD1-206ENST00000540581 IFT140Q96RY7 1462 aa21.3■■□□□ 1
CACFD1-206ENST00000540581 KDM5CP41229 1560 aa21.29■■□□□ 1
CACFD1-206ENST00000540581 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
CACFD1-206ENST00000540581 C9orf84Q5VXU9 1444 aa21.28■■□□□ 1
CACFD1-206ENST00000540581 RCAN3Q9UKA8 241 aa21.28■■□□□ 1
CACFD1-206ENST00000540581 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
CACFD1-206ENST00000540581 RNF123Q5XPI4 1314 aa21.28■■□□□ 1
CACFD1-206ENST00000540581 IPO9Q96P70 1041 aaKnown RBP21.26■□□□□ 0.99
CACFD1-206ENST00000540581 POLR1AO95602 1720 aaPredicted RBP21.26■□□□□ 0.99
CACFD1-206ENST00000540581 PRKCSHP14314 528 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms