RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
TMEM109-203ENST00000540280 ATP10BO94823 1461 aa19.25■□□□□ 0.67
TMEM109-203ENST00000540280 C3P01024 1663 aa19.24■□□□□ 0.67
TMEM109-203ENST00000540280 HECW1Q76N89 1606 aa19.22■□□□□ 0.67
TMEM109-203ENST00000540280 RGS17Q9UGC6 210 aaPredicted RBP19.21■□□□□ 0.67
TMEM109-203ENST00000540280 CAMSAP1Q5T5Y3 1602 aa19.19■□□□□ 0.66
TMEM109-203ENST00000540280 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
TMEM109-203ENST00000540280 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
TMEM109-203ENST00000540280 SETD1AO15047 1707 aaKnown RBP19.16■□□□□ 0.66
TMEM109-203ENST00000540280 CFAP74Q9C0B2 1584 aa19.15■□□□□ 0.66
TMEM109-203ENST00000540280 NCKAP5LQ9HCH0 1330 aa19.15■□□□□ 0.66
TMEM109-203ENST00000540280 C9orf84Q5VXU9 1444 aa19.13■□□□□ 0.65
TMEM109-203ENST00000540280 ATP10AO60312 1499 aa19.13■□□□□ 0.65
TMEM109-203ENST00000540280 GOLGA3Q08378 1498 aa19.13■□□□□ 0.65
TMEM109-203ENST00000540280 CTTNBP2Q8WZ74 1663 aa19.13■□□□□ 0.65
TMEM109-203ENST00000540280 SRCAPQ6ZRS2 3230 aa19.11■□□□□ 0.65
TMEM109-203ENST00000540280 SENP3Q9H4L4 574 aaPredicted RBP19.1■□□□□ 0.65
TMEM109-203ENST00000540280 TOM1O60784 492 aa19.09■□□□□ 0.65
TMEM109-203ENST00000540280 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
TMEM109-203ENST00000540280 TRAPPC8Q9Y2L5 1435 aa19.08■□□□□ 0.65
TMEM109-203ENST00000540280 ALKQ9UM73 1620 aa19.07■□□□□ 0.64
TMEM109-203ENST00000540280 POTEAQ6S8J7 498 aa19.03■□□□□ 0.64
TMEM109-203ENST00000540280 SUPT6HQ7KZ85 1726 aaKnown RBP19.01■□□□□ 0.63
TMEM109-203ENST00000540280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19■□□□□ 0.63
TMEM109-203ENST00000540280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
TMEM109-203ENST00000540280 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
TMEM109-203ENST00000540280 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
TMEM109-203ENST00000540280 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
TMEM109-203ENST00000540280 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
TMEM109-203ENST00000540280 CPS1P31327 1500 aa18.95■□□□□ 0.62
TMEM109-203ENST00000540280 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
TMEM109-203ENST00000540280 PLA2R1Q13018 1463 aa18.95■□□□□ 0.62
TMEM109-203ENST00000540280 ZNF142P52746 1687 aaPredicted RBP18.94■□□□□ 0.62
TMEM109-203ENST00000540280 PKD2Q13563 968 aa18.93■□□□□ 0.62
TMEM109-203ENST00000540280 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
TMEM109-203ENST00000540280 MYO3AQ8NEV4 1616 aa18.92■□□□□ 0.62
TMEM109-203ENST00000540280 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
TMEM109-203ENST00000540280 DIP2CQ9Y2E4 1556 aa18.91■□□□□ 0.62
TMEM109-203ENST00000540280 ESF1Q9H501 851 aaKnown RBP18.88■□□□□ 0.61
TMEM109-203ENST00000540280 NUP153P49790 1475 aaKnown RBP18.88■□□□□ 0.61
TMEM109-203ENST00000540280 SHANK2Q9UPX8 1470 aa18.88■□□□□ 0.61
TMEM109-203ENST00000540280 NPATQ14207 1427 aa18.87■□□□□ 0.61
TMEM109-203ENST00000540280 REREQ9P2R6 1566 aa18.87■□□□□ 0.61
TMEM109-203ENST00000540280 CEP170BQ9Y4F5 1589 aaPredicted RBP18.87■□□□□ 0.61
TMEM109-203ENST00000540280 ABCA6Q8N139 1617 aa18.86■□□□□ 0.61
TMEM109-203ENST00000540280 AGLP35573 1532 aa18.86■□□□□ 0.61
TMEM109-203ENST00000540280 UPF1Q92900 1129 aaKnown RBP eCLIP18.86■□□□□ 0.617e-8■■■■■ 78.5
TMEM109-203ENST00000540280 MROH2AA6NES4 1674 aa18.84■□□□□ 0.61
TMEM109-203ENST00000540280 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.6
TMEM109-203ENST00000540280 KDM5CP41229 1560 aa18.82■□□□□ 0.6
TMEM109-203ENST00000540280 POLR1AO95602 1720 aaPredicted RBP18.82■□□□□ 0.6
TMEM109-203ENST00000540280 CNTLNQ9NXG0 1405 aa18.82■□□□□ 0.6
TMEM109-203ENST00000540280 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
TMEM109-203ENST00000540280 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
TMEM109-203ENST00000540280 VWDEQ8N2E2 1590 aa18.8■□□□□ 0.6
TMEM109-203ENST00000540280 ZNF518AQ6AHZ1 1483 aa18.78■□□□□ 0.6
TMEM109-203ENST00000540280 PLCH2O75038 1416 aa18.77■□□□□ 0.6
TMEM109-203ENST00000540280 RNF17Q9BXT8 1623 aaKnown RBP18.76■□□□□ 0.59
TMEM109-203ENST00000540280 AFAP1Q8N556 730 aa18.76■□□□□ 0.59
TMEM109-203ENST00000540280 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
TMEM109-203ENST00000540280 SAMD9Q5K651 1589 aa18.74■□□□□ 0.59
TMEM109-203ENST00000540280 ZMYM3Q14202 1370 aa18.74■□□□□ 0.59
TMEM109-203ENST00000540280 MYO5CQ9NQX4 1742 aa18.73■□□□□ 0.59
TMEM109-203ENST00000540280 STRCP1A6NGW2 1772 aa18.73■□□□□ 0.59
TMEM109-203ENST00000540280 CLTCQ00610 1675 aaKnown RBP18.72■□□□□ 0.59
TMEM109-203ENST00000540280 DNMT1P26358 1616 aaKnown RBP18.71■□□□□ 0.59
TMEM109-203ENST00000540280 LRRC7Q96NW7 1537 aa18.68■□□□□ 0.58
TMEM109-203ENST00000540280 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
TMEM109-203ENST00000540280 EFCAB2Q5VUJ9 269 aa18.66■□□□□ 0.58
TMEM109-203ENST00000540280 A2ML1A8K2U0 1454 aa18.64■□□□□ 0.57
TMEM109-203ENST00000540280 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
TMEM109-203ENST00000540280 SYNMO15061 1565 aa18.63■□□□□ 0.57
TMEM109-203ENST00000540280 KIDINS220Q9ULH0 1771 aa18.62■□□□□ 0.57
TMEM109-203ENST00000540280 CDK13Q14004 1512 aaKnown RBP18.6■□□□□ 0.57
TMEM109-203ENST00000540280 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
TMEM109-203ENST00000540280 XIRP1Q702N8 1843 aaKnown RBP18.56■□□□□ 0.56
TMEM109-203ENST00000540280 ITSN2Q9NZM3 1697 aa18.55■□□□□ 0.56
TMEM109-203ENST00000540280 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
TMEM109-203ENST00000540280 KIF14Q15058 1648 aa18.55■□□□□ 0.56
TMEM109-203ENST00000540280 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
TMEM109-203ENST00000540280 NPHP4O75161 1426 aaPredicted RBP18.54■□□□□ 0.56
TMEM109-203ENST00000540280 SETBP1Q9Y6X0 1596 aa18.51■□□□□ 0.55
TMEM109-203ENST00000540280 DEPDC5O75140 1603 aa18.51■□□□□ 0.55
TMEM109-203ENST00000540280 MED14O60244 1454 aa18.51■□□□□ 0.55
TMEM109-203ENST00000540280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.55
TMEM109-203ENST00000540280 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
TMEM109-203ENST00000540280 FAM135BQ49AJ0 1406 aa18.49■□□□□ 0.55
TMEM109-203ENST00000540280 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
TMEM109-203ENST00000540280 ABCC1P33527 1531 aa18.49■□□□□ 0.55
TMEM109-203ENST00000540280 ANKLE2Q86XL3 938 aa18.48■□□□□ 0.55
TMEM109-203ENST00000540280 RANGAP1P46060 587 aaPredicted RBP18.44■□□□□ 0.54
TMEM109-203ENST00000540280 LRP6O75581 1613 aa18.44■□□□□ 0.54
TMEM109-203ENST00000540280 PLXNC1O60486 1568 aa18.42■□□□□ 0.54
TMEM109-203ENST00000540280 ZC3H13Q5T200 1668 aaKnown RBP18.41■□□□□ 0.54
TMEM109-203ENST00000540280 PHLPP1O60346 1717 aa18.4■□□□□ 0.54
TMEM109-203ENST00000540280 TNRQ92752 1358 aa18.4■□□□□ 0.54
TMEM109-203ENST00000540280 SAMD9LQ8IVG5 1584 aa18.39■□□□□ 0.53
TMEM109-203ENST00000540280 ZNF772Q68DY9 489 aaPredicted RBP18.39■□□□□ 0.53
TMEM109-203ENST00000540280 GGT6Q6P531 493 aa18.39■□□□□ 0.53
TMEM109-203ENST00000540280 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms