RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 FOXD1Q16676 465 aa17.7■□□□□ 0.42
USP10-202ENST00000540269 JPH4Q96JJ6 628 aa17.7■□□□□ 0.42
USP10-202ENST00000540269 DAPK1P53355 1430 aa17.7■□□□□ 0.42
USP10-202ENST00000540269 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
USP10-202ENST00000540269 TROQ12816 1431 aaPredicted RBP17.66■□□□□ 0.42
USP10-202ENST00000540269 DNMT1P26358 1616 aaKnown RBP17.66■□□□□ 0.42
USP10-202ENST00000540269 KIF14Q15058 1648 aa17.66■□□□□ 0.42
USP10-202ENST00000540269 CDK11AQ9UQ88 783 aaPredicted RBP17.63■□□□□ 0.41
USP10-202ENST00000540269 GPATCH8Q9UKJ3 1502 aaKnown RBP17.62■□□□□ 0.41
USP10-202ENST00000540269 ROCK1Q13464 1354 aa17.62■□□□□ 0.41
USP10-202ENST00000540269 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
USP10-202ENST00000540269 CAMSAP2Q08AD1 1489 aa17.6■□□□□ 0.41
USP10-202ENST00000540269 CFDP1Q9UEE9 299 aaPredicted RBP17.6■□□□□ 0.41
USP10-202ENST00000540269 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
USP10-202ENST00000540269 ABCA8O94911 1581 aa17.57■□□□□ 0.4
USP10-202ENST00000540269 L3MBTL2Q969R5 705 aa17.57■□□□□ 0.4
USP10-202ENST00000540269 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
USP10-202ENST00000540269 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
USP10-202ENST00000540269 ATP10BO94823 1461 aa17.56■□□□□ 0.4
USP10-202ENST00000540269 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
USP10-202ENST00000540269 HSPA5P11021 654 aaKnown RBP17.53■□□□□ 0.4
USP10-202ENST00000540269 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.4
USP10-202ENST00000540269 PZPP20742 1482 aa17.52■□□□□ 0.39
USP10-202ENST00000540269 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
USP10-202ENST00000540269 ABCC10Q5T3U5 1492 aa17.51■□□□□ 0.39
USP10-202ENST00000540269 NBPF8Q3BBV2 869 aa17.5■□□□□ 0.39
USP10-202ENST00000540269 RPRD2Q5VT52 1461 aaKnown RBP17.49■□□□□ 0.39
USP10-202ENST00000540269 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
USP10-202ENST00000540269 CDC42BPAQ5VT25 1732 aa17.49■□□□□ 0.39
USP10-202ENST00000540269 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
USP10-202ENST00000540269 TEX14Q8IWB6 1497 aa17.48■□□□□ 0.39
USP10-202ENST00000540269 ANP32CO43423 234 aa17.47■□□□□ 0.39
USP10-202ENST00000540269 CROCC2H7BZ55 1655 aa17.47■□□□□ 0.39
USP10-202ENST00000540269 ADGRL2O95490 1459 aa17.47■□□□□ 0.39
USP10-202ENST00000540269 SUPT16HQ9Y5B9 1047 aaKnown RBP17.46■□□□□ 0.39
USP10-202ENST00000540269 ADGBQ8N7X0 1667 aa17.46■□□□□ 0.39
USP10-202ENST00000540269 C11orf95C9JLR9 678 aaPredicted RBP17.46■□□□□ 0.38
USP10-202ENST00000540269 PTPRGP23470 1445 aa17.45■□□□□ 0.38
USP10-202ENST00000540269 CHD1O14646 1710 aa17.44■□□□□ 0.38
USP10-202ENST00000540269 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
USP10-202ENST00000540269 EIF4G2P78344 907 aaKnown RBP eCLIP17.42■□□□□ 0.388e-7■■■■□ 22.3
USP10-202ENST00000540269 ANKRD30AQ9BXX3 1397 aa17.41■□□□□ 0.38
USP10-202ENST00000540269 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
USP10-202ENST00000540269 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.385e-7■■■■□ 22.5
USP10-202ENST00000540269 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
USP10-202ENST00000540269 PKD2Q13563 968 aa17.39■□□□□ 0.38
USP10-202ENST00000540269 C9orf84Q5VXU9 1444 aa17.39■□□□□ 0.37
USP10-202ENST00000540269 KIAA1107Q9UPP5 1409 aa17.38■□□□□ 0.37
USP10-202ENST00000540269 MBD5Q9P267 1494 aa17.36■□□□□ 0.37
USP10-202ENST00000540269 SPATA31E1Q6ZUB1 1445 aa17.35■□□□□ 0.37
USP10-202ENST00000540269 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
USP10-202ENST00000540269 CDC42BPBQ9Y5S2 1711 aa17.34■□□□□ 0.37
USP10-202ENST00000540269 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
USP10-202ENST00000540269 SAMD9LQ8IVG5 1584 aa17.34■□□□□ 0.37
USP10-202ENST00000540269 CCDC7Q96M83 1385 aa17.34■□□□□ 0.37
USP10-202ENST00000540269 NUP155O75694 1391 aa17.33■□□□□ 0.37
USP10-202ENST00000540269 CCDC184Q52MB2 194 aa17.32■□□□□ 0.36
USP10-202ENST00000540269 KIF15Q9NS87 1388 aa17.31■□□□□ 0.36
USP10-202ENST00000540269 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
USP10-202ENST00000540269 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
USP10-202ENST00000540269 CNTLNQ9NXG0 1405 aa17.31■□□□□ 0.36
USP10-202ENST00000540269 TTC37Q6PGP7 1564 aa17.3■□□□□ 0.36
USP10-202ENST00000540269 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
USP10-202ENST00000540269 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
USP10-202ENST00000540269 ARHGEF5Q12774 1597 aa17.29■□□□□ 0.36
USP10-202ENST00000540269 KIF7Q2M1P5 1343 aa17.29■□□□□ 0.36
USP10-202ENST00000540269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.27■□□□□ 0.351e-6■■■□□ 18.3
USP10-202ENST00000540269 CCDC141Q6ZP82 1450 aa17.26■□□□□ 0.35
USP10-202ENST00000540269 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
USP10-202ENST00000540269 KDM5DQ9BY66 1539 aa17.25■□□□□ 0.35
USP10-202ENST00000540269 BCANQ96GW7 911 aa17.25■□□□□ 0.35
USP10-202ENST00000540269 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
USP10-202ENST00000540269 FKBP8Q14318 412 aa17.23■□□□□ 0.35
USP10-202ENST00000540269 BCORL1Q5H9F3 1711 aa17.23■□□□□ 0.35
USP10-202ENST00000540269 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
USP10-202ENST00000540269 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
USP10-202ENST00000540269 PRKCSHP14314 528 aaPredicted RBP17.22■□□□□ 0.35
USP10-202ENST00000540269 USP47Q96K76 1375 aa17.21■□□□□ 0.35
USP10-202ENST00000540269 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
USP10-202ENST00000540269 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
USP10-202ENST00000540269 KDM2AQ9Y2K7 1162 aa17.19■□□□□ 0.34
USP10-202ENST00000540269 FAM135AQ9P2D6 1515 aa17.18■□□□□ 0.34
USP10-202ENST00000540269 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
USP10-202ENST00000540269 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
USP10-202ENST00000540269 KDM5CP41229 1560 aa17.18■□□□□ 0.34
USP10-202ENST00000540269 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
USP10-202ENST00000540269 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
USP10-202ENST00000540269 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
USP10-202ENST00000540269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.342e-11■■□□□ 14.4
USP10-202ENST00000540269 ZCCHC11Q5TAX3 1644 aaKnown RBP17.15■□□□□ 0.34
USP10-202ENST00000540269 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
USP10-202ENST00000540269 PLEKHH2Q8IVE3 1493 aa17.15■□□□□ 0.34
USP10-202ENST00000540269 RSPH4AQ5TD94 716 aa17.15■□□□□ 0.34
USP10-202ENST00000540269 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
USP10-202ENST00000540269 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.34
USP10-202ENST00000540269 CNGB1Q14028 1251 aaPredicted RBP17.14■□□□□ 0.33
USP10-202ENST00000540269 PLA2R1Q13018 1463 aa17.14■□□□□ 0.33
USP10-202ENST00000540269 MAST1Q9Y2H9 1570 aa17.14■□□□□ 0.33
USP10-202ENST00000540269 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
USP10-202ENST00000540269 CARD11Q9BXL7 1154 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms