RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
SCNN1A-215ENST00000540037 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.63
SCNN1A-215ENST00000540037 ARHGEF11O15085 1522 aa19.01■□□□□ 0.63
SCNN1A-215ENST00000540037 GCC2Q8IWJ2 1684 aa19.01■□□□□ 0.63
SCNN1A-215ENST00000540037 NOP58Q9Y2X3 529 aaKnown RBP18.98■□□□□ 0.63
SCNN1A-215ENST00000540037 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
SCNN1A-215ENST00000540037 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
SCNN1A-215ENST00000540037 ANKRD30BQ9BXX2 1392 aa18.96■□□□□ 0.63
SCNN1A-215ENST00000540037 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
SCNN1A-215ENST00000540037 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
SCNN1A-215ENST00000540037 ZNF644Q9H582 1327 aaPredicted RBP18.95■□□□□ 0.62
SCNN1A-215ENST00000540037 SPATA31E1Q6ZUB1 1445 aa18.95■□□□□ 0.62
SCNN1A-215ENST00000540037 ZNF326Q5BKZ1 582 aaKnown RBP18.94■□□□□ 0.62
SCNN1A-215ENST00000540037 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
SCNN1A-215ENST00000540037 TEX14Q8IWB6 1497 aa18.93■□□□□ 0.62
SCNN1A-215ENST00000540037 SLC4A1APQ9BWU0 796 aaKnown RBP18.93■□□□□ 0.62
SCNN1A-215ENST00000540037 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
SCNN1A-215ENST00000540037 CCDC136Q96JN2 1154 aa18.92■□□□□ 0.62
SCNN1A-215ENST00000540037 ABCA5Q8WWZ7 1642 aa18.9■□□□□ 0.62
SCNN1A-215ENST00000540037 EPRSP07814 1512 aaKnown RBP18.9■□□□□ 0.62
SCNN1A-215ENST00000540037 NUDCQ9Y266 331 aa18.89■□□□□ 0.61
SCNN1A-215ENST00000540037 SMG6Q86US8 1419 aaKnown RBP18.89■□□□□ 0.61
SCNN1A-215ENST00000540037 DHX29Q7Z478 1369 aaKnown RBP18.89■□□□□ 0.61
SCNN1A-215ENST00000540037 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
SCNN1A-215ENST00000540037 DAPK1P53355 1430 aa18.85■□□□□ 0.61
SCNN1A-215ENST00000540037 MIA2Q96PC5 1412 aa18.84■□□□□ 0.61
SCNN1A-215ENST00000540037 MYT1LQ9UL68 1186 aa18.84■□□□□ 0.61
SCNN1A-215ENST00000540037 ABCC5O15440 1437 aa18.83■□□□□ 0.6
SCNN1A-215ENST00000540037 RNF123Q5XPI4 1314 aa18.83■□□□□ 0.6
SCNN1A-215ENST00000540037 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
SCNN1A-215ENST00000540037 IPO9Q96P70 1041 aaKnown RBP18.82■□□□□ 0.6
SCNN1A-215ENST00000540037 USP47Q96K76 1375 aa18.81■□□□□ 0.6
SCNN1A-215ENST00000540037 ANP32AP39687 249 aaKnown RBP18.81■□□□□ 0.6
SCNN1A-215ENST00000540037 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
SCNN1A-215ENST00000540037 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
SCNN1A-215ENST00000540037 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
SCNN1A-215ENST00000540037 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
SCNN1A-215ENST00000540037 NPM2Q86SE8 214 aaKnown RBP18.77■□□□□ 0.6
SCNN1A-215ENST00000540037 TMC1Q8TDI8 760 aa18.77■□□□□ 0.6
SCNN1A-215ENST00000540037 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.6
SCNN1A-215ENST00000540037 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
SCNN1A-215ENST00000540037 ROCK1Q13464 1354 aa18.76■□□□□ 0.59
SCNN1A-215ENST00000540037 WDR62O43379 1518 aa18.76■□□□□ 0.59
SCNN1A-215ENST00000540037 PZPP20742 1482 aa18.75■□□□□ 0.59
SCNN1A-215ENST00000540037 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
SCNN1A-215ENST00000540037 IQGAP2Q13576 1575 aa18.74■□□□□ 0.59
SCNN1A-215ENST00000540037 EXOC6Q8TAG9 804 aa18.73■□□□□ 0.59
SCNN1A-215ENST00000540037 DNMT1P26358 1616 aaKnown RBP18.73■□□□□ 0.59
SCNN1A-215ENST00000540037 PKD2Q13563 968 aa18.73■□□□□ 0.59
SCNN1A-215ENST00000540037 ZNF777Q9ULD5 760 aaPredicted RBP18.72■□□□□ 0.59
SCNN1A-215ENST00000540037 MBD5Q9P267 1494 aa18.71■□□□□ 0.58
SCNN1A-215ENST00000540037 RTL5Q5HYW3 569 aaPredicted RBP18.69■□□□□ 0.58
SCNN1A-215ENST00000540037 KDM2AQ9Y2K7 1162 aa18.69■□□□□ 0.58
SCNN1A-215ENST00000540037 SKAP1Q86WV1 359 aa18.68■□□□□ 0.58
SCNN1A-215ENST00000540037 CARD11Q9BXL7 1154 aa18.67■□□□□ 0.58
SCNN1A-215ENST00000540037 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
SCNN1A-215ENST00000540037 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
SCNN1A-215ENST00000540037 KDM5CP41229 1560 aa18.67■□□□□ 0.58
SCNN1A-215ENST00000540037 ST20-MTHFSA0A0A6YYL1 179 aa18.66■□□□□ 0.58
SCNN1A-215ENST00000540037 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
SCNN1A-215ENST00000540037 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
SCNN1A-215ENST00000540037 KIAA1107Q9UPP5 1409 aa18.65■□□□□ 0.58
SCNN1A-215ENST00000540037 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
SCNN1A-215ENST00000540037 PRG4Q92954 1404 aaPredicted RBP18.64■□□□□ 0.57
SCNN1A-215ENST00000540037 NUP153P49790 1475 aaKnown RBP18.64■□□□□ 0.57
SCNN1A-215ENST00000540037 IL27Q8NEV9 243 aa18.63■□□□□ 0.57
SCNN1A-215ENST00000540037 LRPPRCP42704 1394 aaKnown RBP18.62■□□□□ 0.57
SCNN1A-215ENST00000540037 PBRM1Q86U86 1689 aa18.62■□□□□ 0.57
SCNN1A-215ENST00000540037 CDCA7LQ96GN5 454 aa18.62■□□□□ 0.57
SCNN1A-215ENST00000540037 RCAN3Q9UKA8 241 aa18.62■□□□□ 0.57
SCNN1A-215ENST00000540037 PDE4AP27815 886 aa18.61■□□□□ 0.57
SCNN1A-215ENST00000540037 KIF14Q15058 1648 aa18.61■□□□□ 0.57
SCNN1A-215ENST00000540037 CAMSAP2Q08AD1 1489 aa18.61■□□□□ 0.57
SCNN1A-215ENST00000540037 PLIN1O60240 522 aa18.61■□□□□ 0.57
SCNN1A-215ENST00000540037 KIF15Q9NS87 1388 aa18.61■□□□□ 0.57
SCNN1A-215ENST00000540037 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
SCNN1A-215ENST00000540037 MYBBP1AQ9BQG0 1328 aaKnown RBP18.6■□□□□ 0.57
SCNN1A-215ENST00000540037 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
SCNN1A-215ENST00000540037 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
SCNN1A-215ENST00000540037 ARID4BQ4LE39 1312 aaPredicted RBP18.58■□□□□ 0.56
SCNN1A-215ENST00000540037 DISP1Q96F81 1524 aa18.57■□□□□ 0.56
SCNN1A-215ENST00000540037 DCAF11Q8TEB1 546 aa18.57■□□□□ 0.56
SCNN1A-215ENST00000540037 NEFMP07197 916 aa18.57■□□□□ 0.56
SCNN1A-215ENST00000540037 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
SCNN1A-215ENST00000540037 ROCK2O75116 1388 aaKnown RBP18.56■□□□□ 0.56
SCNN1A-215ENST00000540037 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
SCNN1A-215ENST00000540037 TCERG1O14776 1098 aaKnown RBP18.55■□□□□ 0.56
SCNN1A-215ENST00000540037 NUP155O75694 1391 aa18.55■□□□□ 0.56
SCNN1A-215ENST00000540037 RALGAPBQ86X10 1494 aa18.54■□□□□ 0.56
SCNN1A-215ENST00000540037 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
SCNN1A-215ENST00000540037 ANKRD50Q9ULJ7 1429 aa18.53■□□□□ 0.56
SCNN1A-215ENST00000540037 RALBP1Q15311 655 aa18.53■□□□□ 0.56
SCNN1A-215ENST00000540037 KIAA0556O60303 1618 aa18.53■□□□□ 0.56
SCNN1A-215ENST00000540037 RAPGEF6Q8TEU7 1601 aa18.52■□□□□ 0.56
SCNN1A-215ENST00000540037 UHRF1BP1Q6BDS2 1440 aa18.52■□□□□ 0.55
SCNN1A-215ENST00000540037 KIAA0586Q9BVV6 1533 aa18.51■□□□□ 0.55
SCNN1A-215ENST00000540037 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
SCNN1A-215ENST00000540037 ANKRD30AQ9BXX3 1397 aa18.5■□□□□ 0.55
SCNN1A-215ENST00000540037 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
SCNN1A-215ENST00000540037 CC2D1BQ5T0F9 858 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms