RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ABCC5O15440 1437 aa32.98■■■□□ 2.87
HOMER3-204ENST00000539827 UHRF1BP1LA0JNW5 1464 aa32.97■■■□□ 2.87
HOMER3-204ENST00000539827 GCC2Q8IWJ2 1684 aa32.93■■■□□ 2.86
HOMER3-204ENST00000539827 ZCCHC11Q5TAX3 1644 aaKnown RBP32.92■■■□□ 2.86
HOMER3-204ENST00000539827 AKNAQ7Z591 1439 aa32.92■■■□□ 2.86
HOMER3-204ENST00000539827 KDM5BQ9UGL1 1544 aa32.88■■■□□ 2.85
HOMER3-204ENST00000539827 ROCK1Q13464 1354 aa32.85■■■□□ 2.85
HOMER3-204ENST00000539827 KDM6BO15054 1643 aa32.84■■■□□ 2.85
HOMER3-204ENST00000539827 KCNH8Q96L42 1107 aa32.84■■■□□ 2.85
HOMER3-204ENST00000539827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.82■■■□□ 2.84
HOMER3-204ENST00000539827 TTC37Q6PGP7 1564 aa32.81■■■□□ 2.84
HOMER3-204ENST00000539827 PREX2Q70Z35 1606 aa32.8■■■□□ 2.84
HOMER3-204ENST00000539827 CDC42BPBQ9Y5S2 1711 aa32.8■■■□□ 2.84
HOMER3-204ENST00000539827 SIN3AQ96ST3 1273 aa32.78■■■□□ 2.84
HOMER3-204ENST00000539827 CROCC2H7BZ55 1655 aa32.77■■■□□ 2.84
HOMER3-204ENST00000539827 TRIM52Q96A61 297 aa32.74■■■□□ 2.83
HOMER3-204ENST00000539827 ADGBQ8N7X0 1667 aa32.73■■■□□ 2.83
HOMER3-204ENST00000539827 NEUROD1Q13562 356 aa32.73■■■□□ 2.83
HOMER3-204ENST00000539827 HNRNPMP52272 730 aaKnown RBP eCLIP32.72■■■□□ 2.83
HOMER3-204ENST00000539827 SAMD9LQ8IVG5 1584 aa32.72■■■□□ 2.83
HOMER3-204ENST00000539827 NCOA1Q15788 1441 aa32.69■■■□□ 2.82
HOMER3-204ENST00000539827 ARHGAP5Q13017 1502 aa32.69■■■□□ 2.82
HOMER3-204ENST00000539827 ZNF316A6NFI3 1004 aaPredicted RBP32.69■■■□□ 2.82
HOMER3-204ENST00000539827 MYO5CQ9NQX4 1742 aa32.69■■■□□ 2.82
HOMER3-204ENST00000539827 ADGRL2O95490 1459 aa32.68■■■□□ 2.82
HOMER3-204ENST00000539827 MBD5Q9P267 1494 aa32.65■■■□□ 2.82
HOMER3-204ENST00000539827 ANKRD30AQ9BXX3 1397 aa32.64■■■□□ 2.82
HOMER3-204ENST00000539827 ARHGEF5Q12774 1597 aa32.64■■■□□ 2.82
HOMER3-204ENST00000539827 C9orf84Q5VXU9 1444 aa32.63■■■□□ 2.81
HOMER3-204ENST00000539827 SHANK2Q9UPX8 1470 aa32.63■■■□□ 2.81
HOMER3-204ENST00000539827 TSPY4P0CV99 314 aa32.61■■■□□ 2.81
HOMER3-204ENST00000539827 TSPY10P0CW01 314 aa32.61■■■□□ 2.81
HOMER3-204ENST00000539827 WDR7Q9Y4E6 1490 aa32.59■■■□□ 2.81
HOMER3-204ENST00000539827 PLCH2O75038 1416 aa32.58■■■□□ 2.81
HOMER3-204ENST00000539827 MPHOSPH9Q99550 1183 aa32.58■■■□□ 2.81
HOMER3-204ENST00000539827 SYCP2Q9BX26 1530 aa32.57■■■□□ 2.8
HOMER3-204ENST00000539827 DENND4BO75064 1496 aaPredicted RBP32.57■■■□□ 2.8
HOMER3-204ENST00000539827 CCDC141Q6ZP82 1450 aa32.57■■■□□ 2.8
HOMER3-204ENST00000539827 ACIN1Q9UKV3 1341 aaKnown RBP32.54■■■□□ 2.8
HOMER3-204ENST00000539827 RSPH4AQ5TD94 716 aa32.53■■■□□ 2.8
HOMER3-204ENST00000539827 ASXL2Q76L83 1435 aa32.51■■■□□ 2.8
HOMER3-204ENST00000539827 EFCAB2Q5VUJ9 269 aa32.51■■■□□ 2.8
HOMER3-204ENST00000539827 NPM1P06748 294 aaKnown RBP eCLIP32.5■■■□□ 2.79
HOMER3-204ENST00000539827 TIMELESSQ9UNS1 1208 aa32.5■■■□□ 2.79
HOMER3-204ENST00000539827 PLEKHH2Q8IVE3 1493 aa32.49■■■□□ 2.79
HOMER3-204ENST00000539827 ANKRD50Q9ULJ7 1429 aa32.49■■■□□ 2.79
HOMER3-204ENST00000539827 KIAA1107Q9UPP5 1409 aa32.48■■■□□ 2.79
HOMER3-204ENST00000539827 ARHGEF12Q9NZN5 1544 aa32.46■■■□□ 2.79
HOMER3-204ENST00000539827 DIEXFQ68CQ4 756 aaKnown RBP32.46■■■□□ 2.79
HOMER3-204ENST00000539827 FOXD1Q16676 465 aa32.45■■■□□ 2.79
HOMER3-204ENST00000539827 KIF15Q9NS87 1388 aa32.45■■■□□ 2.78
HOMER3-204ENST00000539827 SLC4A1APQ9BWU0 796 aaKnown RBP32.43■■■□□ 2.78
HOMER3-204ENST00000539827 TONSLQ96HA7 1378 aa32.42■■■□□ 2.78
HOMER3-204ENST00000539827 PZPP20742 1482 aa32.41■■■□□ 2.78
HOMER3-204ENST00000539827 ABCA9Q8IUA7 1624 aa32.4■■■□□ 2.78
HOMER3-204ENST00000539827 MAST1Q9Y2H9 1570 aa32.4■■■□□ 2.78
HOMER3-204ENST00000539827 ABCC1P33527 1531 aa32.39■■■□□ 2.78
HOMER3-204ENST00000539827 ARAP3Q8WWN8 1544 aa32.38■■■□□ 2.77
HOMER3-204ENST00000539827 PPP1R15AO75807 674 aaPredicted RBP32.38■■■□□ 2.77
HOMER3-204ENST00000539827 DNAJC5Q9H3Z4 198 aa32.35■■■□□ 2.77
HOMER3-204ENST00000539827 TRAPPC8Q9Y2L5 1435 aa32.33■■■□□ 2.77
HOMER3-204ENST00000539827 ANKRD30BQ9BXX2 1392 aa32.31■■■□□ 2.76
HOMER3-204ENST00000539827 FANCAO15360 1455 aa32.29■■■□□ 2.76
HOMER3-204ENST00000539827 NUP155O75694 1391 aa32.29■■■□□ 2.76
HOMER3-204ENST00000539827 PLXNC1O60486 1568 aa32.27■■■□□ 2.76
HOMER3-204ENST00000539827 CYB5RLQ6IPT4 315 aa32.27■■■□□ 2.76
HOMER3-204ENST00000539827 RIMBP3CA6NJZ7 1639 aa32.26■■■□□ 2.75
HOMER3-204ENST00000539827 RIMBP3BA6NNM3 1639 aa32.26■■■□□ 2.75
HOMER3-204ENST00000539827 RIMBP3Q9UFD9 1639 aa32.26■■■□□ 2.75
HOMER3-204ENST00000539827 PKD2Q13563 968 aa32.24■■■□□ 2.75
HOMER3-204ENST00000539827 AFAP1Q8N556 730 aa32.23■■■□□ 2.75
HOMER3-204ENST00000539827 KDM5DQ9BY66 1539 aa32.22■■■□□ 2.75
HOMER3-204ENST00000539827 SPAG9O60271 1321 aaKnown RBP32.19■■■□□ 2.74
HOMER3-204ENST00000539827 DUOX2Q9NRD8 1548 aa32.17■■■□□ 2.74
HOMER3-204ENST00000539827 ADGRL1O94910 1474 aa32.17■■■□□ 2.74
HOMER3-204ENST00000539827 RPRD2Q5VT52 1461 aaKnown RBP32.17■■■□□ 2.74
HOMER3-204ENST00000539827 SCAPERQ9BY12 1400 aa32.16■■■□□ 2.74
HOMER3-204ENST00000539827 CD109Q6YHK3 1445 aa32.15■■■□□ 2.74
HOMER3-204ENST00000539827 L3MBTL2Q969R5 705 aa32.12■■■□□ 2.73
HOMER3-204ENST00000539827 RTEL1-TNFRSF6BF6WH68 1400 aa32.12■■■□□ 2.73
HOMER3-204ENST00000539827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.1■■■□□ 2.73
HOMER3-204ENST00000539827 ZFYVE16Q7Z3T8 1539 aa32.1■■■□□ 2.73
HOMER3-204ENST00000539827 UNC13BO14795 1591 aa32.1■■■□□ 2.73
HOMER3-204ENST00000539827 FAM135AQ9P2D6 1515 aa32.09■■■□□ 2.73
HOMER3-204ENST00000539827 ERBINQ96RT1 1412 aa32.09■■■□□ 2.73
HOMER3-204ENST00000539827 MYT1LQ9UL68 1186 aa32.05■■■□□ 2.72
HOMER3-204ENST00000539827 ATP7AQ04656 1500 aa32.04■■■□□ 2.72
HOMER3-204ENST00000539827 INO80Q9ULG1 1556 aaPredicted RBP32.04■■■□□ 2.72
HOMER3-204ENST00000539827 TEX14Q8IWB6 1497 aa32.03■■■□□ 2.72
HOMER3-204ENST00000539827 CFAP74Q9C0B2 1584 aa32.01■■■□□ 2.72
HOMER3-204ENST00000539827 HIRIP3Q9BW71 556 aaPredicted RBP31.99■■■□□ 2.71
HOMER3-204ENST00000539827 IQGAP3Q86VI3 1631 aa31.98■■■□□ 2.71
HOMER3-204ENST00000539827 MAGI2Q86UL8 1455 aa31.96■■■□□ 2.71
HOMER3-204ENST00000539827 MIER1Q8N108 512 aa31.94■■■□□ 2.7
HOMER3-204ENST00000539827 ZNF518AQ6AHZ1 1483 aa31.93■■■□□ 2.7
HOMER3-204ENST00000539827 NBPF8Q3BBV2 869 aa31.91■■■□□ 2.7
HOMER3-204ENST00000539827 KIDINS220Q9ULH0 1771 aa31.9■■■□□ 2.7
HOMER3-204ENST00000539827 POGZQ7Z3K3 1410 aa31.89■■■□□ 2.7
HOMER3-204ENST00000539827 MAP3K4Q9Y6R4 1608 aa31.88■■■□□ 2.69
HOMER3-204ENST00000539827 NEO1Q92859 1461 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms