RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 HECW1Q76N89 1606 aa11.93□□□□□ -0.5
LDHB-208ENST00000539782 CDK11AQ9UQ88 783 aaPredicted RBP11.92□□□□□ -0.5
LDHB-208ENST00000539782 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
LDHB-208ENST00000539782 SCAPERQ9BY12 1400 aa11.92□□□□□ -0.5
LDHB-208ENST00000539782 PLCH2O75038 1416 aa11.9□□□□□ -0.5
LDHB-208ENST00000539782 HSPA2P54652 639 aa11.9□□□□□ -0.5
LDHB-208ENST00000539782 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
LDHB-208ENST00000539782 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
LDHB-208ENST00000539782 FER1L4A9Z1Z3 1794 aa11.89□□□□□ -0.51
LDHB-208ENST00000539782 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
LDHB-208ENST00000539782 CLIP1P30622 1438 aa11.87□□□□□ -0.51
LDHB-208ENST00000539782 C9orf84Q5VXU9 1444 aa11.87□□□□□ -0.51
LDHB-208ENST00000539782 KIF14Q15058 1648 aa11.87□□□□□ -0.51
LDHB-208ENST00000539782 ATP10AO60312 1499 aa11.87□□□□□ -0.51
LDHB-208ENST00000539782 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
LDHB-208ENST00000539782 SIGLEC1Q9BZZ2 1709 aa11.86□□□□□ -0.51
LDHB-208ENST00000539782 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
LDHB-208ENST00000539782 ARHGAP35Q9NRY4 1499 aa11.84□□□□□ -0.51
LDHB-208ENST00000539782 ARHGEF12Q9NZN5 1544 aa11.84□□□□□ -0.51
LDHB-208ENST00000539782 TROQ12816 1431 aaPredicted RBP11.84□□□□□ -0.51
LDHB-208ENST00000539782 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
LDHB-208ENST00000539782 CERKQ8TCT0 537 aa11.81□□□□□ -0.52
LDHB-208ENST00000539782 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
LDHB-208ENST00000539782 AFAP1Q8N556 730 aa11.8□□□□□ -0.52
LDHB-208ENST00000539782 KDM5CP41229 1560 aa11.79□□□□□ -0.52
LDHB-208ENST00000539782 UHRF1BP1Q6BDS2 1440 aa11.79□□□□□ -0.52
LDHB-208ENST00000539782 CEBPAP49715 358 aaPredicted RBP11.79□□□□□ -0.52
LDHB-208ENST00000539782 CCDC18Q5T9S5 1454 aa11.78□□□□□ -0.52
LDHB-208ENST00000539782 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
LDHB-208ENST00000539782 DIP2CQ9Y2E4 1556 aa11.78□□□□□ -0.52
LDHB-208ENST00000539782 REREQ9P2R6 1566 aa11.76□□□□□ -0.53
LDHB-208ENST00000539782 PREX2Q70Z35 1606 aa11.76□□□□□ -0.53
LDHB-208ENST00000539782 ABCA6Q8N139 1617 aa11.75□□□□□ -0.53
LDHB-208ENST00000539782 CASKIN1Q8WXD9 1431 aa11.75□□□□□ -0.53
LDHB-208ENST00000539782 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
LDHB-208ENST00000539782 ABCC1P33527 1531 aa11.75□□□□□ -0.53
LDHB-208ENST00000539782 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
LDHB-208ENST00000539782 CDC42BPBQ9Y5S2 1711 aa11.74□□□□□ -0.53
LDHB-208ENST00000539782 ITSN2Q9NZM3 1697 aa11.74□□□□□ -0.53
LDHB-208ENST00000539782 TRAPPC8Q9Y2L5 1435 aa11.73□□□□□ -0.53
LDHB-208ENST00000539782 AGLP35573 1532 aa11.72□□□□□ -0.53
LDHB-208ENST00000539782 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
LDHB-208ENST00000539782 FYCO1Q9BQS8 1478 aa11.71□□□□□ -0.53
LDHB-208ENST00000539782 CNTLNQ9NXG0 1405 aa11.71□□□□□ -0.53
LDHB-208ENST00000539782 C3P01024 1663 aa11.71□□□□□ -0.54
LDHB-208ENST00000539782 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
LDHB-208ENST00000539782 CDC42BPAQ5VT25 1732 aa11.69□□□□□ -0.54
LDHB-208ENST00000539782 PTPRTO14522 1441 aa11.69□□□□□ -0.54
LDHB-208ENST00000539782 SPAG9O60271 1321 aaKnown RBP11.68□□□□□ -0.54
LDHB-208ENST00000539782 KIDINS220Q9ULH0 1771 aa11.68□□□□□ -0.54
LDHB-208ENST00000539782 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
LDHB-208ENST00000539782 SYCP2Q9BX26 1530 aa11.67□□□□□ -0.54
LDHB-208ENST00000539782 SAMD9LQ8IVG5 1584 aa11.67□□□□□ -0.54
LDHB-208ENST00000539782 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
LDHB-208ENST00000539782 PLEKHH2Q8IVE3 1493 aa11.65□□□□□ -0.54
LDHB-208ENST00000539782 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.55
LDHB-208ENST00000539782 NPATQ14207 1427 aa11.64□□□□□ -0.55
LDHB-208ENST00000539782 NCOA1Q15788 1441 aa11.64□□□□□ -0.55
LDHB-208ENST00000539782 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.55
LDHB-208ENST00000539782 CFDP1Q9UEE9 299 aaPredicted RBP11.64□□□□□ -0.55
LDHB-208ENST00000539782 MROH2AA6NES4 1674 aa11.64□□□□□ -0.55
LDHB-208ENST00000539782 ATP7AQ04656 1500 aa11.64□□□□□ -0.55
LDHB-208ENST00000539782 GPATCH8Q9UKJ3 1502 aaKnown RBP11.64□□□□□ -0.55
LDHB-208ENST00000539782 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
LDHB-208ENST00000539782 MTUS2Q5JR59 1369 aa11.63□□□□□ -0.55
LDHB-208ENST00000539782 CAMSAP1Q5T5Y3 1602 aa11.63□□□□□ -0.55
LDHB-208ENST00000539782 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
LDHB-208ENST00000539782 A2MP01023 1474 aa11.62□□□□□ -0.55
LDHB-208ENST00000539782 KIAA1107Q9UPP5 1409 aa11.61□□□□□ -0.55
LDHB-208ENST00000539782 IQSEC2Q5JU85 1478 aa11.61□□□□□ -0.55
LDHB-208ENST00000539782 INO80Q9ULG1 1556 aaPredicted RBP11.61□□□□□ -0.55
LDHB-208ENST00000539782 CLTCQ00610 1675 aaKnown RBP11.61□□□□□ -0.55
LDHB-208ENST00000539782 SPATA31D1Q6ZQQ2 1576 aa11.6□□□□□ -0.55
LDHB-208ENST00000539782 GGT6Q6P531 493 aa11.6□□□□□ -0.55
LDHB-208ENST00000539782 LTBP4Q8N2S1 1624 aa11.6□□□□□ -0.55
LDHB-208ENST00000539782 MYO3AQ8NEV4 1616 aa11.59□□□□□ -0.55
LDHB-208ENST00000539782 NCKAP5LQ9HCH0 1330 aa11.59□□□□□ -0.55
LDHB-208ENST00000539782 PLXNC1O60486 1568 aa11.58□□□□□ -0.55
LDHB-208ENST00000539782 EHBP1L1Q8N3D4 1523 aa11.57□□□□□ -0.56
LDHB-208ENST00000539782 ZNF142P52746 1687 aaPredicted RBP11.57□□□□□ -0.56
LDHB-208ENST00000539782 ADGBQ8N7X0 1667 aa11.57□□□□□ -0.56
LDHB-208ENST00000539782 CEP170BQ9Y4F5 1589 aaPredicted RBP11.57□□□□□ -0.56
LDHB-208ENST00000539782 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
LDHB-208ENST00000539782 PKD2Q13563 968 aa11.56□□□□□ -0.56
LDHB-208ENST00000539782 PTPRKQ15262 1439 aa11.56□□□□□ -0.56
LDHB-208ENST00000539782 TIAM1Q13009 1591 aa11.55□□□□□ -0.56
LDHB-208ENST00000539782 UBAP1LF5GYI3 381 aa11.55□□□□□ -0.56
LDHB-208ENST00000539782 ILDR2Q71H61 639 aa11.55□□□□□ -0.56
LDHB-208ENST00000539782 PPP6R1Q9UPN7 881 aa11.55□□□□□ -0.56
LDHB-208ENST00000539782 ZNF335Q9H4Z2 1342 aaPredicted RBP11.55□□□□□ -0.56
LDHB-208ENST00000539782 SOCS7O14512 581 aa11.54□□□□□ -0.56
LDHB-208ENST00000539782 SENP3Q9H4L4 574 aaPredicted RBP11.54□□□□□ -0.56
LDHB-208ENST00000539782 ZNF644Q9H582 1327 aaPredicted RBP11.53□□□□□ -0.56
LDHB-208ENST00000539782 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.56
LDHB-208ENST00000539782 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.56
LDHB-208ENST00000539782 RTEL1-TNFRSF6BF6WH68 1400 aa11.52□□□□□ -0.57
LDHB-208ENST00000539782 CEP162Q5TB80 1403 aa11.52□□□□□ -0.57
LDHB-208ENST00000539782 DHX29Q7Z478 1369 aaKnown RBP11.51□□□□□ -0.57
LDHB-208ENST00000539782 CCDC141Q6ZP82 1450 aa11.51□□□□□ -0.57
LDHB-208ENST00000539782 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms