RNA–Protein interactions for RNA: ENST00000539595.5

TRPT1-208, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 5

Gene TRPT1, Length 1,809 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-208ENST00000539595 PLEKHD1A6NEE1 506 aa26.09■■□□□ 1.77
TRPT1-208ENST00000539595 TIMELESSQ9UNS1 1208 aa26.09■■□□□ 1.77
TRPT1-208ENST00000539595 CFDP1Q9UEE9 299 aaPredicted RBP26.08■■□□□ 1.77
TRPT1-208ENST00000539595 ABCC10Q5T3U5 1492 aa26.07■■□□□ 1.76
TRPT1-208ENST00000539595 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
TRPT1-208ENST00000539595 ERCC6L2Q5T890 1561 aa26.05■■□□□ 1.76
TRPT1-208ENST00000539595 CDC42BPAQ5VT25 1732 aa26.03■■□□□ 1.76
TRPT1-208ENST00000539595 CROCC2H7BZ55 1655 aa25.99■■□□□ 1.75
TRPT1-208ENST00000539595 DENND4BO75064 1496 aaPredicted RBP25.97■■□□□ 1.75
TRPT1-208ENST00000539595 ADGBQ8N7X0 1667 aa25.97■■□□□ 1.75
TRPT1-208ENST00000539595 ABCC2Q92887 1545 aa25.96■■□□□ 1.75
TRPT1-208ENST00000539595 TRIM52Q96A61 297 aa25.95■■□□□ 1.74
TRPT1-208ENST00000539595 ZNF777Q9ULD5 760 aaPredicted RBP25.95■■□□□ 1.74
TRPT1-208ENST00000539595 ADGRL2O95490 1459 aa25.94■■□□□ 1.74
TRPT1-208ENST00000539595 ACIN1Q9UKV3 1341 aaKnown RBP25.94■■□□□ 1.74
TRPT1-208ENST00000539595 TONSLQ96HA7 1378 aa25.93■■□□□ 1.74
TRPT1-208ENST00000539595 PPP1R15AO75807 674 aaPredicted RBP25.91■■□□□ 1.74
TRPT1-208ENST00000539595 NCOA1Q15788 1441 aa25.9■■□□□ 1.74
TRPT1-208ENST00000539595 MIER1Q8N108 512 aa25.9■■□□□ 1.74
TRPT1-208ENST00000539595 MPHOSPH9Q99550 1183 aa25.88■■□□□ 1.73
TRPT1-208ENST00000539595 SHANK2Q9UPX8 1470 aa25.88■■□□□ 1.73
TRPT1-208ENST00000539595 PREX2Q70Z35 1606 aa25.87■■□□□ 1.73
TRPT1-208ENST00000539595 ANKRD30AQ9BXX3 1397 aa25.84■■□□□ 1.73
TRPT1-208ENST00000539595 KDM5BQ9UGL1 1544 aa25.83■■□□□ 1.73
TRPT1-208ENST00000539595 UHRF1BP1LA0JNW5 1464 aa25.82■■□□□ 1.72
TRPT1-208ENST00000539595 CDC42BPBQ9Y5S2 1711 aa25.82■■□□□ 1.72
TRPT1-208ENST00000539595 ARHGEF5Q12774 1597 aa25.82■■□□□ 1.72
TRPT1-208ENST00000539595 TTC37Q6PGP7 1564 aa25.81■■□□□ 1.72
TRPT1-208ENST00000539595 C9orf84Q5VXU9 1444 aa25.8■■□□□ 1.72
TRPT1-208ENST00000539595 SAMD9LQ8IVG5 1584 aa25.8■■□□□ 1.72
TRPT1-208ENST00000539595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.79■■□□□ 1.72
TRPT1-208ENST00000539595 ZCCHC11Q5TAX3 1644 aaKnown RBP25.78■■□□□ 1.72
TRPT1-208ENST00000539595 MBD5Q9P267 1494 aa25.77■■□□□ 1.72
TRPT1-208ENST00000539595 PZPP20742 1482 aa25.76■■□□□ 1.71
TRPT1-208ENST00000539595 ANKRD30BQ9BXX2 1392 aa25.74■■□□□ 1.71
TRPT1-208ENST00000539595 ANKRD50Q9ULJ7 1429 aa25.74■■□□□ 1.71
TRPT1-208ENST00000539595 CCDC141Q6ZP82 1450 aa25.73■■□□□ 1.71
TRPT1-208ENST00000539595 FOXD1Q16676 465 aa25.72■■□□□ 1.71
TRPT1-208ENST00000539595 ARHGAP5Q13017 1502 aa25.72■■□□□ 1.71
TRPT1-208ENST00000539595 SLC4A1APQ9BWU0 796 aaKnown RBP25.72■■□□□ 1.71
TRPT1-208ENST00000539595 MYO5CQ9NQX4 1742 aa25.72■■□□□ 1.71
TRPT1-208ENST00000539595 HNRNPMP52272 730 aaKnown RBP eCLIP25.71■■□□□ 1.71
TRPT1-208ENST00000539595 TSPY4P0CV99 314 aa25.7■■□□□ 1.7
TRPT1-208ENST00000539595 TSPY10P0CW01 314 aa25.7■■□□□ 1.7
TRPT1-208ENST00000539595 CENPBP07199 599 aaPredicted RBP25.68■■□□□ 1.7
TRPT1-208ENST00000539595 RPRD2Q5VT52 1461 aaKnown RBP25.68■■□□□ 1.7
TRPT1-208ENST00000539595 SYCP2Q9BX26 1530 aa25.68■■□□□ 1.7
TRPT1-208ENST00000539595 KIF15Q9NS87 1388 aa25.65■■□□□ 1.7
TRPT1-208ENST00000539595 RSPH4AQ5TD94 716 aa25.65■■□□□ 1.7
TRPT1-208ENST00000539595 PLEKHH2Q8IVE3 1493 aa25.63■■□□□ 1.69
TRPT1-208ENST00000539595 MAST1Q9Y2H9 1570 aa25.63■■□□□ 1.69
TRPT1-208ENST00000539595 KCNH8Q96L42 1107 aa25.62■■□□□ 1.69
TRPT1-208ENST00000539595 KDM5DQ9BY66 1539 aa25.62■■□□□ 1.69
TRPT1-208ENST00000539595 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
TRPT1-208ENST00000539595 TEX14Q8IWB6 1497 aa25.61■■□□□ 1.69
TRPT1-208ENST00000539595 PLCH2O75038 1416 aa25.59■■□□□ 1.69
TRPT1-208ENST00000539595 L3MBTL2Q969R5 705 aa25.58■■□□□ 1.69
TRPT1-208ENST00000539595 YTHDC1Q96MU7 727 aaKnown RBP25.58■■□□□ 1.68
TRPT1-208ENST00000539595 HIRIP3Q9BW71 556 aaPredicted RBP25.57■■□□□ 1.68
TRPT1-208ENST00000539595 NUP155O75694 1391 aa25.56■■□□□ 1.68
TRPT1-208ENST00000539595 PKD2Q13563 968 aa25.54■■□□□ 1.68
TRPT1-208ENST00000539595 SCAF1Q9H7N4 1312 aaKnown RBP25.53■■□□□ 1.68
TRPT1-208ENST00000539595 ARHGEF12Q9NZN5 1544 aa25.53■■□□□ 1.68
TRPT1-208ENST00000539595 PLXNC1O60486 1568 aa25.53■■□□□ 1.68
TRPT1-208ENST00000539595 WDR7Q9Y4E6 1490 aa25.51■■□□□ 1.68
TRPT1-208ENST00000539595 DDX10Q13206 875 aaKnown RBP25.51■■□□□ 1.67
TRPT1-208ENST00000539595 ABCC1P33527 1531 aa25.51■■□□□ 1.67
TRPT1-208ENST00000539595 ARAP3Q8WWN8 1544 aa25.5■■□□□ 1.67
TRPT1-208ENST00000539595 EFCAB2Q5VUJ9 269 aa25.49■■□□□ 1.67
TRPT1-208ENST00000539595 OSCARQ8IYS5 282 aa25.47■■□□□ 1.67
TRPT1-208ENST00000539595 UNC13BO14795 1591 aa25.45■■□□□ 1.66
TRPT1-208ENST00000539595 FAM135AQ9P2D6 1515 aa25.44■■□□□ 1.66
TRPT1-208ENST00000539595 HSPA5P11021 654 aaKnown RBP25.42■■□□□ 1.66
TRPT1-208ENST00000539595 NBPF8Q3BBV2 869 aa25.42■■□□□ 1.66
TRPT1-208ENST00000539595 DUOX2Q9NRD8 1548 aa25.41■■□□□ 1.66
TRPT1-208ENST00000539595 ABCA9Q8IUA7 1624 aa25.41■■□□□ 1.66
TRPT1-208ENST00000539595 TRAPPC8Q9Y2L5 1435 aa25.4■■□□□ 1.66
TRPT1-208ENST00000539595 EIF4G2P78344 907 aaKnown RBP eCLIP25.39■■□□□ 1.65
TRPT1-208ENST00000539595 ASXL2Q76L83 1435 aa25.38■■□□□ 1.65
TRPT1-208ENST00000539595 ERBINQ96RT1 1412 aa25.37■■□□□ 1.65
TRPT1-208ENST00000539595 IQGAP3Q86VI3 1631 aa25.34■■□□□ 1.65
TRPT1-208ENST00000539595 MAGI2Q86UL8 1455 aa25.33■■□□□ 1.65
TRPT1-208ENST00000539595 FANCAO15360 1455 aa25.33■■□□□ 1.65
TRPT1-208ENST00000539595 ZFYVE16Q7Z3T8 1539 aa25.31■■□□□ 1.64
TRPT1-208ENST00000539595 RTEL1-TNFRSF6BF6WH68 1400 aa25.3■■□□□ 1.64
TRPT1-208ENST00000539595 WASHC2AQ641Q2 1341 aa25.29■■□□□ 1.64
TRPT1-208ENST00000539595 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
TRPT1-208ENST00000539595 SPATA31E1Q6ZUB1 1445 aa25.28■■□□□ 1.64
TRPT1-208ENST00000539595 UHRF1BP1Q6BDS2 1440 aa25.27■■□□□ 1.64
TRPT1-208ENST00000539595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.26■■□□□ 1.636e-6■□□□□ 8.3
TRPT1-208ENST00000539595 GTF3C3Q9Y5Q9 886 aa25.26■■□□□ 1.63
TRPT1-208ENST00000539595 ANP32CO43423 234 aa25.25■■□□□ 1.63
TRPT1-208ENST00000539595 AFAP1Q8N556 730 aa25.25■■□□□ 1.63
TRPT1-208ENST00000539595 INO80Q9ULG1 1556 aaPredicted RBP25.25■■□□□ 1.63
TRPT1-208ENST00000539595 NPM1P06748 294 aaKnown RBP eCLIP25.23■■□□□ 1.63
TRPT1-208ENST00000539595 ADGRL1O94910 1474 aa25.23■■□□□ 1.63
TRPT1-208ENST00000539595 PLA2R1Q13018 1463 aa25.22■■□□□ 1.63
TRPT1-208ENST00000539595 ATP7AQ04656 1500 aa25.22■■□□□ 1.63
TRPT1-208ENST00000539595 RALGAPBQ86X10 1494 aa25.21■■□□□ 1.63
TRPT1-208ENST00000539595 CCDC144AA2RUR9 1427 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms