RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 NRDCO43847 1150 aa8.29□□□□□ -1.08
LSAMP-207ENST00000539563 HDGFL2Q7Z4V5 671 aaPredicted RBP8.29□□□□□ -1.08
LSAMP-207ENST00000539563 SOGA1O94964 1423 aa8.28□□□□□ -1.08
LSAMP-207ENST00000539563 KTN1Q86UP2 1357 aaKnown RBP8.28□□□□□ -1.08
LSAMP-207ENST00000539563 HSCBQ8IWL3 235 aa8.28□□□□□ -1.08
LSAMP-207ENST00000539563 NOP58Q9Y2X3 529 aaKnown RBP8.28□□□□□ -1.08
LSAMP-207ENST00000539563 RGS3P49796 1198 aa8.28□□□□□ -1.08
LSAMP-207ENST00000539563 MROH2BQ7Z745 1585 aa8.27□□□□□ -1.08
LSAMP-207ENST00000539563 IPO8O15397 1037 aaKnown RBP8.27□□□□□ -1.09
LSAMP-207ENST00000539563 CHMP4AQ9BY43 222 aa8.27□□□□□ -1.09
LSAMP-207ENST00000539563 PTMSP20962 102 aa8.26□□□□□ -1.09
LSAMP-207ENST00000539563 EIF3AQ14152 1382 aaKnown RBP8.26□□□□□ -1.09
LSAMP-207ENST00000539563 ANKRD30AQ9BXX3 1397 aa8.26□□□□□ -1.09
LSAMP-207ENST00000539563 ROCK2O75116 1388 aaKnown RBP8.26□□□□□ -1.09
LSAMP-207ENST00000539563 RALBP1Q15311 655 aa8.25□□□□□ -1.09
LSAMP-207ENST00000539563 GOLGA6L4A6NEF3 574 aa8.25□□□□□ -1.09
LSAMP-207ENST00000539563 NAP1L2Q9ULW6 460 aaPredicted RBP8.25□□□□□ -1.09
LSAMP-207ENST00000539563 SENP3-EIF4A1A0A087X0R7 540 aa8.24□□□□□ -1.09
LSAMP-207ENST00000539563 RSPH4AQ5TD94 716 aa8.24□□□□□ -1.09
LSAMP-207ENST00000539563 PKD2Q13563 968 aa8.24□□□□□ -1.09
LSAMP-207ENST00000539563 CCDC18Q5T9S5 1454 aa8.24□□□□□ -1.09
LSAMP-207ENST00000539563 HSPA5P11021 654 aaKnown RBP8.24□□□□□ -1.09
LSAMP-207ENST00000539563 B4GALNT3Q6L9W6 998 aa8.24□□□□□ -1.09
LSAMP-207ENST00000539563 EFCAB2Q5VUJ9 269 aa8.24□□□□□ -1.09
LSAMP-207ENST00000539563 TPRNQ4KMQ1 711 aa8.23□□□□□ -1.09
LSAMP-207ENST00000539563 L1TD1Q5T7N2 865 aaKnown RBP8.23□□□□□ -1.09
LSAMP-207ENST00000539563 TRHP20396 242 aaPredicted RBP8.23□□□□□ -1.09
LSAMP-207ENST00000539563 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
LSAMP-207ENST00000539563 MPHOSPH9Q99550 1183 aa8.23□□□□□ -1.09
LSAMP-207ENST00000539563 BICRAQ9NZM4 1560 aa8.23□□□□□ -1.09
LSAMP-207ENST00000539563 MLECQ14165 292 aa8.22□□□□□ -1.09
LSAMP-207ENST00000539563 GGT6Q6P531 493 aa8.22□□□□□ -1.09
LSAMP-207ENST00000539563 KIAA1211Q6ZU35 1233 aa8.22□□□□□ -1.09
LSAMP-207ENST00000539563 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
LSAMP-207ENST00000539563 CHAF1AQ13111 956 aaPredicted RBP8.22□□□□□ -1.09
LSAMP-207ENST00000539563 RAB3GAP2Q9H2M9 1393 aa8.21□□□□□ -1.09
LSAMP-207ENST00000539563 STK26Q9P289 416 aa8.21□□□□□ -1.1
LSAMP-207ENST00000539563 RAPGEF2Q9Y4G8 1499 aa8.21□□□□□ -1.1
LSAMP-207ENST00000539563 NUP155O75694 1391 aa8.21□□□□□ -1.1
LSAMP-207ENST00000539563 PMFBP1Q8TBY8 1022 aa8.21□□□□□ -1.1
LSAMP-207ENST00000539563 NAP1L5Q96NT1 182 aaPredicted RBP8.21□□□□□ -1.1
LSAMP-207ENST00000539563 HDAC5Q9UQL6 1122 aa8.2□□□□□ -1.1
LSAMP-207ENST00000539563 SMARCA4P51532 1647 aa8.2□□□□□ -1.1
LSAMP-207ENST00000539563 SPAG9O60271 1321 aaKnown RBP8.2□□□□□ -1.1
LSAMP-207ENST00000539563 RWDD1Q9H446 243 aaPredicted RBP8.19□□□□□ -1.1
LSAMP-207ENST00000539563 RCAN3Q9UKA8 241 aa8.19□□□□□ -1.1
LSAMP-207ENST00000539563 SOX12O15370 315 aa8.19□□□□□ -1.1
LSAMP-207ENST00000539563 MSNP26038 577 aaKnown RBP8.19□□□□□ -1.1
LSAMP-207ENST00000539563 PHLDB1Q86UU1 1377 aa8.19□□□□□ -1.1
LSAMP-207ENST00000539563 SAFB2Q14151 953 aaKnown RBP eCLIP8.19□□□□□ -1.1
LSAMP-207ENST00000539563 GPATCH3Q96I76 525 aa8.19□□□□□ -1.1
LSAMP-207ENST00000539563 HTATSF1O43719 755 aaKnown RBP8.18□□□□□ -1.1
LSAMP-207ENST00000539563 TERF2IPQ9NYB0 399 aa8.18□□□□□ -1.1
LSAMP-207ENST00000539563 TAOK2Q9UL54 1235 aa8.18□□□□□ -1.1
LSAMP-207ENST00000539563 GBP4Q96PP9 640 aa8.18□□□□□ -1.1
LSAMP-207ENST00000539563 PRDM2Q13029 1718 aa8.18□□□□□ -1.1
LSAMP-207ENST00000539563 PAK3O75914 559 aaPredicted RBP8.18□□□□□ -1.1
LSAMP-207ENST00000539563 GNL2Q13823 731 aaKnown RBP8.18□□□□□ -1.1
LSAMP-207ENST00000539563 U2AF1L5P0DN76 240 aaPredicted RBP8.17□□□□□ -1.1
LSAMP-207ENST00000539563 U2AF1Q01081 240 aaKnown RBP eCLIP8.17□□□□□ -1.1
LSAMP-207ENST00000539563 TCERG1O14776 1098 aaKnown RBP8.17□□□□□ -1.1
LSAMP-207ENST00000539563 UACAQ9BZF9 1416 aa8.17□□□□□ -1.1
LSAMP-207ENST00000539563 DRC7Q8IY82 874 aa8.17□□□□□ -1.1
LSAMP-207ENST00000539563 EID1Q9Y6B2 187 aa8.17□□□□□ -1.1
LSAMP-207ENST00000539563 LMOD3Q0VAK6 560 aa8.17□□□□□ -1.1
LSAMP-207ENST00000539563 KANK4Q5T7N3 995 aaPredicted RBP8.16□□□□□ -1.1
LSAMP-207ENST00000539563 FOXD1Q16676 465 aa8.15□□□□□ -1.1
LSAMP-207ENST00000539563 SYAP1Q96A49 352 aaPredicted RBP8.15□□□□□ -1.1
LSAMP-207ENST00000539563 TMX4Q9H1E5 349 aaPredicted RBP8.15□□□□□ -1.1
LSAMP-207ENST00000539563 STK31Q9BXU1 1019 aa8.15□□□□□ -1.1
LSAMP-207ENST00000539563 ITPRIPQ8IWB1 547 aa8.15□□□□□ -1.1
LSAMP-207ENST00000539563 PDE3BQ13370 1112 aa8.15□□□□□ -1.11
LSAMP-207ENST00000539563 CSPP1Q1MSJ5 1256 aa8.15□□□□□ -1.11
LSAMP-207ENST00000539563 HMMRO75330 724 aa8.15□□□□□ -1.11
LSAMP-207ENST00000539563 CSB-PGBD3P0DP91 1061 aa8.14□□□□□ -1.11
LSAMP-207ENST00000539563 TDRD9Q8NDG6 1382 aaKnown RBP8.14□□□□□ -1.11
LSAMP-207ENST00000539563 KIAA2012Q0VF49 1180 aa8.14□□□□□ -1.11
LSAMP-207ENST00000539563 KIF3BO15066 747 aa8.14□□□□□ -1.11
LSAMP-207ENST00000539563 CADPSQ9ULU8 1353 aa8.14□□□□□ -1.11
LSAMP-207ENST00000539563 KIF15Q9NS87 1388 aa8.14□□□□□ -1.11
LSAMP-207ENST00000539563 TPM4P67936 248 aa8.14□□□□□ -1.11
LSAMP-207ENST00000539563 HNRNPMP52272 730 aaKnown RBP eCLIP8.13□□□□□ -1.11
LSAMP-207ENST00000539563 CCDC34Q96HJ3 373 aa8.13□□□□□ -1.11
LSAMP-207ENST00000539563 SMC4Q9NTJ3 1288 aa8.13□□□□□ -1.11
LSAMP-207ENST00000539563 TAF7LQ5H9L4 462 aa8.13□□□□□ -1.11
LSAMP-207ENST00000539563 WASHC2CQ9Y4E1 1318 aa8.12□□□□□ -1.11
LSAMP-207ENST00000539563 NLRP13Q86W25 1043 aa8.12□□□□□ -1.11
LSAMP-207ENST00000539563 GORABQ5T7V8 394 aa8.12□□□□□ -1.11
LSAMP-207ENST00000539563 ISY1Q9ULR0 285 aaKnown RBP8.12□□□□□ -1.11
LSAMP-207ENST00000539563 SPRYD3Q8NCJ5 442 aa8.11□□□□□ -1.11
LSAMP-207ENST00000539563 RBM19Q9Y4C8 960 aaKnown RBP8.11□□□□□ -1.11
LSAMP-207ENST00000539563 FHOD3Q2V2M9 1422 aa8.11□□□□□ -1.11
LSAMP-207ENST00000539563 NGDNQ8NEJ9 315 aaKnown RBP8.11□□□□□ -1.11
LSAMP-207ENST00000539563 APBB1O00213 710 aa8.1□□□□□ -1.11
LSAMP-207ENST00000539563 JPH4Q96JJ6 628 aa8.1□□□□□ -1.11
LSAMP-207ENST00000539563 CCDC144AA2RUR9 1427 aa8.1□□□□□ -1.11
LSAMP-207ENST00000539563 AMPHP49418 695 aa8.1□□□□□ -1.11
LSAMP-207ENST00000539563 CENPJQ9HC77 1338 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-207ENST00000539563 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
LSAMP-207ENST00000539563 CUX1P39880 1505 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms