RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 RIMBP3CA6NJZ7 1639 aa9.25□□□□□ -0.93
PDZRN4-203ENST00000539469 RIMBP3BA6NNM3 1639 aa9.25□□□□□ -0.93
PDZRN4-203ENST00000539469 RIMBP3Q9UFD9 1639 aa9.25□□□□□ -0.93
PDZRN4-203ENST00000539469 ARHGEF11O15085 1522 aa9.25□□□□□ -0.93
PDZRN4-203ENST00000539469 ABCC2Q92887 1545 aa9.25□□□□□ -0.93
PDZRN4-203ENST00000539469 APLP2Q06481 763 aa9.24□□□□□ -0.93
PDZRN4-203ENST00000539469 ERICH6Q7L0X2 663 aa9.24□□□□□ -0.93
PDZRN4-203ENST00000539469 ZCCHC11Q5TAX3 1644 aaKnown RBP9.24□□□□□ -0.93
PDZRN4-203ENST00000539469 EHBP1L1Q8N3D4 1523 aa9.24□□□□□ -0.93
PDZRN4-203ENST00000539469 NPM1P06748 294 aaKnown RBP eCLIP9.23□□□□□ -0.93
PDZRN4-203ENST00000539469 PKD2Q13563 968 aa9.23□□□□□ -0.93
PDZRN4-203ENST00000539469 UACAQ9BZF9 1416 aa9.23□□□□□ -0.93
PDZRN4-203ENST00000539469 SUPT6HQ7KZ85 1726 aaKnown RBP9.22□□□□□ -0.93
PDZRN4-203ENST00000539469 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.22□□□□□ -0.93
PDZRN4-203ENST00000539469 ATP10BO94823 1461 aa9.22□□□□□ -0.93
PDZRN4-203ENST00000539469 KIF14Q15058 1648 aa9.22□□□□□ -0.93
PDZRN4-203ENST00000539469 UHRF1BP1LA0JNW5 1464 aa9.2□□□□□ -0.94
PDZRN4-203ENST00000539469 PHLDB1Q86UU1 1377 aa9.19□□□□□ -0.94
PDZRN4-203ENST00000539469 MTUS2Q5JR59 1369 aa9.19□□□□□ -0.94
PDZRN4-203ENST00000539469 NCOA2Q15596 1464 aa9.18□□□□□ -0.94
PDZRN4-203ENST00000539469 KDM5BQ9UGL1 1544 aa9.18□□□□□ -0.94
PDZRN4-203ENST00000539469 SLC4A2P04920 1241 aa9.17□□□□□ -0.94
PDZRN4-203ENST00000539469 TROQ12816 1431 aaPredicted RBP9.16□□□□□ -0.94
PDZRN4-203ENST00000539469 CDC42BPAQ5VT25 1732 aa9.16□□□□□ -0.94
PDZRN4-203ENST00000539469 RRBP1Q9P2E9 1410 aaKnown RBP9.15□□□□□ -0.94
PDZRN4-203ENST00000539469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.15□□□□□ -0.94
PDZRN4-203ENST00000539469 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
PDZRN4-203ENST00000539469 TTC37Q6PGP7 1564 aa9.14□□□□□ -0.95
PDZRN4-203ENST00000539469 IFNLR1Q8IU57 520 aaPredicted RBP9.14□□□□□ -0.95
PDZRN4-203ENST00000539469 ITSN2Q9NZM3 1697 aa9.13□□□□□ -0.95
PDZRN4-203ENST00000539469 NEUROD1Q13562 356 aa9.13□□□□□ -0.95
PDZRN4-203ENST00000539469 PTPN23Q9H3S7 1636 aa9.13□□□□□ -0.95
PDZRN4-203ENST00000539469 ABCC10Q5T3U5 1492 aa9.13□□□□□ -0.95
PDZRN4-203ENST00000539469 CDC42BPBQ9Y5S2 1711 aa9.12□□□□□ -0.95
PDZRN4-203ENST00000539469 MYOM3Q5VTT5 1437 aa9.12□□□□□ -0.95
PDZRN4-203ENST00000539469 BBXQ8WY36 941 aaPredicted RBP9.12□□□□□ -0.95
PDZRN4-203ENST00000539469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDZRN4-203ENST00000539469 FGD6Q6ZV73 1430 aa9.12□□□□□ -0.95
PDZRN4-203ENST00000539469 PREX2Q70Z35 1606 aa9.11□□□□□ -0.95
PDZRN4-203ENST00000539469 CCNB3Q8WWL7 1395 aa9.11□□□□□ -0.95
PDZRN4-203ENST00000539469 MYO5CQ9NQX4 1742 aa9.11□□□□□ -0.95
PDZRN4-203ENST00000539469 CDK11AQ9UQ88 783 aaPredicted RBP9.1□□□□□ -0.95
PDZRN4-203ENST00000539469 WDR7Q9Y4E6 1490 aa9.09□□□□□ -0.95
PDZRN4-203ENST00000539469 GPATCH8Q9UKJ3 1502 aaKnown RBP9.09□□□□□ -0.95
PDZRN4-203ENST00000539469 PLEKHD1A6NEE1 506 aa9.09□□□□□ -0.95
PDZRN4-203ENST00000539469 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
PDZRN4-203ENST00000539469 ASXL2Q76L83 1435 aa9.08□□□□□ -0.96
PDZRN4-203ENST00000539469 TCOF1Q13428 1488 aaKnown RBP9.08□□□□□ -0.96
PDZRN4-203ENST00000539469 VASPP50552 380 aaPredicted RBP9.07□□□□□ -0.96
PDZRN4-203ENST00000539469 ABCA9Q8IUA7 1624 aa9.07□□□□□ -0.96
PDZRN4-203ENST00000539469 ACIN1Q9UKV3 1341 aaKnown RBP9.07□□□□□ -0.96
PDZRN4-203ENST00000539469 ZEB1P37275 1124 aaPredicted RBP9.07□□□□□ -0.96
PDZRN4-203ENST00000539469 CROCC2H7BZ55 1655 aa9.06□□□□□ -0.96
PDZRN4-203ENST00000539469 MAPKBP1O60336 1514 aa9.06□□□□□ -0.96
PDZRN4-203ENST00000539469 SAMD9LQ8IVG5 1584 aa9.06□□□□□ -0.96
PDZRN4-203ENST00000539469 CAMSAP2Q08AD1 1489 aa9.06□□□□□ -0.96
PDZRN4-203ENST00000539469 MIA2Q96PC5 1412 aa9.05□□□□□ -0.96
PDZRN4-203ENST00000539469 DNMT1P26358 1616 aaKnown RBP9.05□□□□□ -0.96
PDZRN4-203ENST00000539469 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
PDZRN4-203ENST00000539469 SPRYD3Q8NCJ5 442 aa9.05□□□□□ -0.96
PDZRN4-203ENST00000539469 KCNH8Q96L42 1107 aa9.05□□□□□ -0.96
PDZRN4-203ENST00000539469 PTPRKQ15262 1439 aa9.04□□□□□ -0.96
PDZRN4-203ENST00000539469 ATXN8OSP0DMR3 200 aa9.04□□□□□ -0.96
PDZRN4-203ENST00000539469 RNF216Q9NWF9 866 aaPredicted RBP9.04□□□□□ -0.96
PDZRN4-203ENST00000539469 ZNF644Q9H582 1327 aaPredicted RBP9.04□□□□□ -0.96
PDZRN4-203ENST00000539469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.04□□□□□ -0.96
PDZRN4-203ENST00000539469 ARHGAP5Q13017 1502 aa9.03□□□□□ -0.96
PDZRN4-203ENST00000539469 ATF5Q9Y2D1 282 aaPredicted RBP9.03□□□□□ -0.96
PDZRN4-203ENST00000539469 ITGAEP38570 1179 aa9.02□□□□□ -0.96
PDZRN4-203ENST00000539469 KIF13AQ9H1H9 1805 aa9.02□□□□□ -0.97
PDZRN4-203ENST00000539469 DIP2BQ9P265 1576 aa9.02□□□□□ -0.97
PDZRN4-203ENST00000539469 MAP3K4Q9Y6R4 1608 aa9.02□□□□□ -0.97
PDZRN4-203ENST00000539469 FBXO3Q9UK99 471 aa9.02□□□□□ -0.97
PDZRN4-203ENST00000539469 TRHP20396 242 aaPredicted RBP9.01□□□□□ -0.97
PDZRN4-203ENST00000539469 ADGBQ8N7X0 1667 aa9.01□□□□□ -0.97
PDZRN4-203ENST00000539469 SYCP2Q9BX26 1530 aa9.01□□□□□ -0.97
PDZRN4-203ENST00000539469 GCC2Q8IWJ2 1684 aa9□□□□□ -0.97
PDZRN4-203ENST00000539469 CFDP1Q9UEE9 299 aaPredicted RBP9□□□□□ -0.97
PDZRN4-203ENST00000539469 PLCH2O75038 1416 aa9□□□□□ -0.97
PDZRN4-203ENST00000539469 DAPK1P53355 1430 aa9□□□□□ -0.97
PDZRN4-203ENST00000539469 ABCC1P33527 1531 aa9□□□□□ -0.97
PDZRN4-203ENST00000539469 ARAP3Q8WWN8 1544 aa9□□□□□ -0.97
PDZRN4-203ENST00000539469 PPRC1Q5VV67 1664 aaKnown RBP9□□□□□ -0.97
PDZRN4-203ENST00000539469 MYCNP04198 464 aaPredicted RBP8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 YTHDC1Q96MU7 727 aaKnown RBP8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 ARID3AQ99856 593 aa8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 ARHGEF5Q12774 1597 aa8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 ABCC5O15440 1437 aa8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 MYT1Q01538 1121 aa8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 ZNF777Q9ULD5 760 aaPredicted RBP8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 ARHGEF12Q9NZN5 1544 aa8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 GLI2P10070 1586 aa8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 DMRT2Q9Y5R5 561 aa8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 KDM6BO15054 1643 aa8.99□□□□□ -0.97
PDZRN4-203ENST00000539469 TSPOAP1O95153 1857 aa8.98□□□□□ -0.97
PDZRN4-203ENST00000539469 MBD5Q9P267 1494 aa8.98□□□□□ -0.97
PDZRN4-203ENST00000539469 FANCAO15360 1455 aa8.96□□□□□ -0.97
PDZRN4-203ENST00000539469 CFAP74Q9C0B2 1584 aa8.96□□□□□ -0.98
PDZRN4-203ENST00000539469 ECM2O94769 699 aaPredicted RBP8.95□□□□□ -0.98
PDZRN4-203ENST00000539469 CD109Q6YHK3 1445 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms