RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-210	ENST00000539191	ZMYM4	Q5VZL5	1548 aa		13.8	□□□□□ -0.2
NPIPB4-210	ENST00000539191	EEA1	Q15075	1411 aa		13.8	□□□□□ -0.2
NPIPB4-210	ENST00000539191	UBTF	P17480	764 aa	Known RBP	13.79	□□□□□ -0.2
NPIPB4-210	ENST00000539191	ARHGAP35	Q9NRY4	1499 aa		13.79	□□□□□ -0.2
NPIPB4-210	ENST00000539191	SCAPER	Q9BY12	1400 aa		13.78	□□□□□ -0.2
NPIPB4-210	ENST00000539191	FBXO41	Q8TF61	875 aa		13.77	□□□□□ -0.21
NPIPB4-210	ENST00000539191	POGZ	Q7Z3K3	1410 aa		13.76	□□□□□ -0.21
NPIPB4-210	ENST00000539191	CEBPA	P49715	358 aa	Predicted RBP	13.76	□□□□□ -0.21
NPIPB4-210	ENST00000539191	PLCH2	O75038	1416 aa		13.74	□□□□□ -0.21
NPIPB4-210	ENST00000539191	CDC42BPB	Q9Y5S2	1711 aa		13.74	□□□□□ -0.21
NPIPB4-210	ENST00000539191	ARHGAP5	Q13017	1502 aa		13.72	□□□□□ -0.21
NPIPB4-210	ENST00000539191	AFAP1	Q8N556	730 aa		13.71	□□□□□ -0.21
NPIPB4-210	ENST00000539191	ABCA6	Q8N139	1617 aa		13.71	□□□□□ -0.22
NPIPB4-210	ENST00000539191	CHIC1	Q5VXU3	224 aa		13.7	□□□□□ -0.22
NPIPB4-210	ENST00000539191	ARHGEF12	Q9NZN5	1544 aa		13.69	□□□□□ -0.22
NPIPB4-210	ENST00000539191	PREX1	Q8TCU6	1659 aa		13.69	□□□□□ -0.22
NPIPB4-210	ENST00000539191	ATP10A	O60312	1499 aa		13.69	□□□□□ -0.22
NPIPB4-210	ENST00000539191	STRC	Q7RTU9	1775 aa		13.69	□□□□□ -0.22
NPIPB4-210	ENST00000539191	MYT1L	Q9UL68	1186 aa		13.69	□□□□□ -0.22
NPIPB4-210	ENST00000539191	DIP2C	Q9Y2E4	1556 aa		13.69	□□□□□ -0.22
NPIPB4-210	ENST00000539191	C9orf84	Q5VXU9	1444 aa		13.68	□□□□□ -0.22
NPIPB4-210	ENST00000539191	MAGI2	Q86UL8	1455 aa		13.67	□□□□□ -0.22
NPIPB4-210	ENST00000539191	FMN1	Q68DA7	1419 aa		13.67	□□□□□ -0.22
NPIPB4-210	ENST00000539191	CDC42BPA	Q5VT25	1732 aa		13.67	□□□□□ -0.22
NPIPB4-210	ENST00000539191	C3	P01024	1663 aa		13.66	□□□□□ -0.22
NPIPB4-210	ENST00000539191	ITSN2	Q9NZM3	1697 aa		13.66	□□□□□ -0.22
NPIPB4-210	ENST00000539191	TRO	Q12816	1431 aa	Predicted RBP	13.66	□□□□□ -0.22
NPIPB4-210	ENST00000539191	PREX2	Q70Z35	1606 aa		13.66	□□□□□ -0.22
NPIPB4-210	ENST00000539191	EFCAB2	Q5VUJ9	269 aa		13.66	□□□□□ -0.22
NPIPB4-210	ENST00000539191	KDM5C	P41229	1560 aa		13.66	□□□□□ -0.22
NPIPB4-210	ENST00000539191	TRAPPC8	Q9Y2L5	1435 aa		13.65	□□□□□ -0.22
NPIPB4-210	ENST00000539191	ZNF518A	Q6AHZ1	1483 aa		13.63	□□□□□ -0.23
NPIPB4-210	ENST00000539191	ABCC1	P33527	1531 aa		13.63	□□□□□ -0.23
NPIPB4-210	ENST00000539191	KIDINS220	Q9ULH0	1771 aa		13.63	□□□□□ -0.23
NPIPB4-210	ENST00000539191	CERK	Q8TCT0	537 aa		13.62	□□□□□ -0.23
NPIPB4-210	ENST00000539191	CLIP1	P30622	1438 aa		13.6	□□□□□ -0.23
NPIPB4-210	ENST00000539191	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.6	□□□□□ -0.23
NPIPB4-210	ENST00000539191	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.6	□□□□□ -0.23
NPIPB4-210	ENST00000539191	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.59	□□□□□ -0.23
NPIPB4-210	ENST00000539191	SAMD9L	Q8IVG5	1584 aa		13.58	□□□□□ -0.23
NPIPB4-210	ENST00000539191	SYCP2	Q9BX26	1530 aa		13.57	□□□□□ -0.24
NPIPB4-210	ENST00000539191	CASKIN1	Q8WXD9	1431 aa		13.56	□□□□□ -0.24
NPIPB4-210	ENST00000539191	SETD1B	Q9UPS6	1966 aa	Known RBP	13.56	□□□□□ -0.24
NPIPB4-210	ENST00000539191	UHRF1BP1	Q6BDS2	1440 aa		13.56	□□□□□ -0.24
NPIPB4-210	ENST00000539191	CLTC	Q00610	1675 aa	Known RBP	13.55	□□□□□ -0.24
NPIPB4-210	ENST00000539191	MLH3	Q9UHC1	1453 aa		13.55	□□□□□ -0.24
NPIPB4-210	ENST00000539191	RERE	Q9P2R6	1566 aa		13.54	□□□□□ -0.24
NPIPB4-210	ENST00000539191	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
NPIPB4-210	ENST00000539191	CCDC18	Q5T9S5	1454 aa		13.53	□□□□□ -0.24
NPIPB4-210	ENST00000539191	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.51	□□□□□ -0.25
NPIPB4-210	ENST00000539191	FYCO1	Q9BQS8	1478 aa		13.5	□□□□□ -0.25
NPIPB4-210	ENST00000539191	ILDR2	Q71H61	639 aa		13.5	□□□□□ -0.25
NPIPB4-210	ENST00000539191	AGL	P35573	1532 aa		13.49	□□□□□ -0.25
NPIPB4-210	ENST00000539191	CAMSAP1	Q5T5Y3	1602 aa		13.49	□□□□□ -0.25
NPIPB4-210	ENST00000539191	ZNF644	Q9H582	1327 aa	Predicted RBP	13.48	□□□□□ -0.25
NPIPB4-210	ENST00000539191	ESF1	Q9H501	851 aa	Known RBP	13.48	□□□□□ -0.25
NPIPB4-210	ENST00000539191	LTBP4	Q8N2S1	1624 aa		13.48	□□□□□ -0.25
NPIPB4-210	ENST00000539191	INO80	Q9ULG1	1556 aa	Predicted RBP	13.48	□□□□□ -0.25
NPIPB4-210	ENST00000539191	ATP7A	Q04656	1500 aa		13.48	□□□□□ -0.25
NPIPB4-210	ENST00000539191	MYO3A	Q8NEV4	1616 aa		13.46	□□□□□ -0.25
NPIPB4-210	ENST00000539191	DISP3	Q9P2K9	1392 aa		13.46	□□□□□ -0.25
NPIPB4-210	ENST00000539191	NCKAP5L	Q9HCH0	1330 aa		13.46	□□□□□ -0.25
NPIPB4-210	ENST00000539191	SPAG9	O60271	1321 aa	Known RBP	13.45	□□□□□ -0.26
NPIPB4-210	ENST00000539191	MROH2A	A6NES4	1674 aa		13.45	□□□□□ -0.26
NPIPB4-210	ENST00000539191	NCOA1	Q15788	1441 aa		13.45	□□□□□ -0.26
NPIPB4-210	ENST00000539191	PLXNC1	O60486	1568 aa		13.45	□□□□□ -0.26
NPIPB4-210	ENST00000539191	TIAM1	Q13009	1591 aa		13.45	□□□□□ -0.26
NPIPB4-210	ENST00000539191	ADGB	Q8N7X0	1667 aa		13.44	□□□□□ -0.26
NPIPB4-210	ENST00000539191	GGT6	Q6P531	493 aa		13.43	□□□□□ -0.26
NPIPB4-210	ENST00000539191	ZMYM3	Q14202	1370 aa		13.43	□□□□□ -0.26
NPIPB4-210	ENST00000539191	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.42	□□□□□ -0.26
NPIPB4-210	ENST00000539191	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.42	□□□□□ -0.26
NPIPB4-210	ENST00000539191	CCNB3	Q8WWL7	1395 aa		13.42	□□□□□ -0.26
NPIPB4-210	ENST00000539191	A2M	P01023	1474 aa		13.42	□□□□□ -0.26
NPIPB4-210	ENST00000539191	SPATA31D1	Q6ZQQ2	1576 aa		13.41	□□□□□ -0.26
NPIPB4-210	ENST00000539191	PTPRT	O14522	1441 aa		13.41	□□□□□ -0.26
NPIPB4-210	ENST00000539191	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.41	□□□□□ -0.26
NPIPB4-210	ENST00000539191	ZNF142	P52746	1687 aa	Predicted RBP	13.4	□□□□□ -0.26
NPIPB4-210	ENST00000539191	DMRT2	Q9Y5R5	561 aa		13.4	□□□□□ -0.26
NPIPB4-210	ENST00000539191	CNTLN	Q9NXG0	1405 aa		13.39	□□□□□ -0.27
NPIPB4-210	ENST00000539191	MTUS2	Q5JR59	1369 aa		13.39	□□□□□ -0.27
NPIPB4-210	ENST00000539191	PTPRK	Q15262	1439 aa		13.39	□□□□□ -0.27
NPIPB4-210	ENST00000539191	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.36	□□□□□ -0.27
NPIPB4-210	ENST00000539191	NPAT	Q14207	1427 aa		13.36	□□□□□ -0.27
NPIPB4-210	ENST00000539191	MBD5	Q9P267	1494 aa		13.36	□□□□□ -0.27
NPIPB4-210	ENST00000539191	CFAP65	Q6ZU64	1925 aa	Known RBP	13.35	□□□□□ -0.27
NPIPB4-210	ENST00000539191	EHBP1L1	Q8N3D4	1523 aa		13.35	□□□□□ -0.27
NPIPB4-210	ENST00000539191	KIAA1107	Q9UPP5	1409 aa		13.35	□□□□□ -0.27
NPIPB4-210	ENST00000539191	DNMT1	P26358	1616 aa	Known RBP	13.35	□□□□□ -0.27
NPIPB4-210	ENST00000539191	POLR1A	O95602	1720 aa	Predicted RBP	13.34	□□□□□ -0.27
NPIPB4-210	ENST00000539191	PLEKHH2	Q8IVE3	1493 aa		13.33	□□□□□ -0.28
NPIPB4-210	ENST00000539191	CEP162	Q5TB80	1403 aa		13.32	□□□□□ -0.28
NPIPB4-210	ENST00000539191	CAMSAP2	Q08AD1	1489 aa		13.32	□□□□□ -0.28
NPIPB4-210	ENST00000539191	UBAP1L	F5GYI3	381 aa		13.32	□□□□□ -0.28
NPIPB4-210	ENST00000539191	SENP3	Q9H4L4	574 aa	Predicted RBP	13.32	□□□□□ -0.28
NPIPB4-210	ENST00000539191	NEURL4	Q96JN8	1562 aa		13.32	□□□□□ -0.28
NPIPB4-210	ENST00000539191	TCOF1	Q13428	1488 aa	Known RBP	13.31	□□□□□ -0.28
NPIPB4-210	ENST00000539191	NCOA2	Q15596	1464 aa		13.31	□□□□□ -0.28
NPIPB4-210	ENST00000539191	KIF3B	O15066	747 aa		13.3	□□□□□ -0.28
NPIPB4-210	ENST00000539191	SCAF1	Q9H7N4	1312 aa	Known RBP	13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms