RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 LMTK3Q96Q04 1460 aa10.38□□□□□ -0.75
USP30-210ENST00000539121 CDK11AQ9UQ88 783 aaPredicted RBP10.38□□□□□ -0.75
USP30-210ENST00000539121 FMN1Q68DA7 1419 aa10.38□□□□□ -0.75
USP30-210ENST00000539121 TTC37Q6PGP7 1564 aa10.38□□□□□ -0.75
USP30-210ENST00000539121 ZFYVE16Q7Z3T8 1539 aa10.37□□□□□ -0.75
USP30-210ENST00000539121 SCAPERQ9BY12 1400 aa10.36□□□□□ -0.75
USP30-210ENST00000539121 EFCAB2Q5VUJ9 269 aa10.36□□□□□ -0.75
USP30-210ENST00000539121 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
USP30-210ENST00000539121 YEATS2Q9ULM3 1422 aa10.35□□□□□ -0.75
USP30-210ENST00000539121 CDK13Q14004 1512 aaKnown RBP10.35□□□□□ -0.75
USP30-210ENST00000539121 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
USP30-210ENST00000539121 HECW1Q76N89 1606 aa10.34□□□□□ -0.75
USP30-210ENST00000539121 MAPK8IP2Q13387 824 aaPredicted RBP10.34□□□□□ -0.75
USP30-210ENST00000539121 POTEDQ86YR6 584 aa10.34□□□□□ -0.75
USP30-210ENST00000539121 ATP10AO60312 1499 aa10.33□□□□□ -0.76
USP30-210ENST00000539121 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
USP30-210ENST00000539121 SIGLEC1Q9BZZ2 1709 aa10.31□□□□□ -0.76
USP30-210ENST00000539121 MYO5CQ9NQX4 1742 aa10.31□□□□□ -0.76
USP30-210ENST00000539121 ATP1B4Q9UN42 357 aaPredicted RBP10.31□□□□□ -0.76
USP30-210ENST00000539121 SETD1BQ9UPS6 1966 aaKnown RBP10.31□□□□□ -0.76
USP30-210ENST00000539121 TROQ12816 1431 aaPredicted RBP10.31□□□□□ -0.76
USP30-210ENST00000539121 C9orf84Q5VXU9 1444 aa10.31□□□□□ -0.76
USP30-210ENST00000539121 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
USP30-210ENST00000539121 FER1L4A9Z1Z3 1794 aa10.3□□□□□ -0.76
USP30-210ENST00000539121 ARHGEF12Q9NZN5 1544 aa10.3□□□□□ -0.76
USP30-210ENST00000539121 MLECQ14165 292 aa10.3□□□□□ -0.76
USP30-210ENST00000539121 CLIP1P30622 1438 aa10.3□□□□□ -0.76
USP30-210ENST00000539121 KIF14Q15058 1648 aa10.29□□□□□ -0.76
USP30-210ENST00000539121 HSPA2P54652 639 aa10.29□□□□□ -0.76
USP30-210ENST00000539121 AFAP1Q8N556 730 aa10.28□□□□□ -0.76
USP30-210ENST00000539121 KDM5CP41229 1560 aa10.27□□□□□ -0.76
USP30-210ENST00000539121 ARHGAP5Q13017 1502 aa10.27□□□□□ -0.77
USP30-210ENST00000539121 MLH3Q9UHC1 1453 aa10.26□□□□□ -0.77
USP30-210ENST00000539121 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
USP30-210ENST00000539121 DMRT2Q9Y5R5 561 aa10.26□□□□□ -0.77
USP30-210ENST00000539121 REREQ9P2R6 1566 aa10.26□□□□□ -0.77
USP30-210ENST00000539121 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
USP30-210ENST00000539121 CCDC18Q5T9S5 1454 aa10.24□□□□□ -0.77
USP30-210ENST00000539121 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
USP30-210ENST00000539121 CDC42BPBQ9Y5S2 1711 aa10.24□□□□□ -0.77
USP30-210ENST00000539121 CASKIN1Q8WXD9 1431 aa10.24□□□□□ -0.77
USP30-210ENST00000539121 CEBPAP49715 358 aaPredicted RBP10.23□□□□□ -0.77
USP30-210ENST00000539121 MYT1LQ9UL68 1186 aa10.23□□□□□ -0.77
USP30-210ENST00000539121 UHRF1BP1Q6BDS2 1440 aa10.23□□□□□ -0.77
USP30-210ENST00000539121 AGLP35573 1532 aa10.23□□□□□ -0.77
USP30-210ENST00000539121 DIP2CQ9Y2E4 1556 aa10.22□□□□□ -0.77
USP30-210ENST00000539121 LRRIQ1Q96JM4 1722 aa10.22□□□□□ -0.77
USP30-210ENST00000539121 NCBP3Q53F19 620 aaKnown RBP10.21□□□□□ -0.77
USP30-210ENST00000539121 ESF1Q9H501 851 aaKnown RBP10.21□□□□□ -0.77
USP30-210ENST00000539121 PREX2Q70Z35 1606 aa10.21□□□□□ -0.78
USP30-210ENST00000539121 ABCC1P33527 1531 aa10.2□□□□□ -0.78
USP30-210ENST00000539121 CNTLNQ9NXG0 1405 aa10.2□□□□□ -0.78
USP30-210ENST00000539121 TRAPPC8Q9Y2L5 1435 aa10.2□□□□□ -0.78
USP30-210ENST00000539121 STRCQ7RTU9 1775 aa10.19□□□□□ -0.78
USP30-210ENST00000539121 ABCA6Q8N139 1617 aa10.19□□□□□ -0.78
USP30-210ENST00000539121 FYCO1Q9BQS8 1478 aa10.18□□□□□ -0.78
USP30-210ENST00000539121 PTPRTO14522 1441 aa10.18□□□□□ -0.78
USP30-210ENST00000539121 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
USP30-210ENST00000539121 KIDINS220Q9ULH0 1771 aa10.18□□□□□ -0.78
USP30-210ENST00000539121 C3P01024 1663 aa10.18□□□□□ -0.78
USP30-210ENST00000539121 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
USP30-210ENST00000539121 CDC42BPAQ5VT25 1732 aa10.17□□□□□ -0.78
USP30-210ENST00000539121 KIAA1107Q9UPP5 1409 aa10.16□□□□□ -0.78
USP30-210ENST00000539121 NPATQ14207 1427 aa10.16□□□□□ -0.78
USP30-210ENST00000539121 SPAG9O60271 1321 aaKnown RBP10.15□□□□□ -0.78
USP30-210ENST00000539121 GPATCH8Q9UKJ3 1502 aaKnown RBP10.15□□□□□ -0.78
USP30-210ENST00000539121 PLEKHH2Q8IVE3 1493 aa10.15□□□□□ -0.78
USP30-210ENST00000539121 SAMD9LQ8IVG5 1584 aa10.14□□□□□ -0.79
USP30-210ENST00000539121 ZMYM3Q14202 1370 aa10.14□□□□□ -0.79
USP30-210ENST00000539121 MROH2AA6NES4 1674 aa10.13□□□□□ -0.79
USP30-210ENST00000539121 HNRNPMP52272 730 aaKnown RBP eCLIP10.13□□□□□ -0.79
USP30-210ENST00000539121 CFDP1Q9UEE9 299 aaPredicted RBP10.13□□□□□ -0.79
USP30-210ENST00000539121 ZNF777Q9ULD5 760 aaPredicted RBP10.13□□□□□ -0.79
USP30-210ENST00000539121 IQSEC2Q5JU85 1478 aa10.12□□□□□ -0.79
USP30-210ENST00000539121 NCOA1Q15788 1441 aa10.12□□□□□ -0.79
USP30-210ENST00000539121 SYCP2Q9BX26 1530 aa10.12□□□□□ -0.79
USP30-210ENST00000539121 CCNB3Q8WWL7 1395 aa10.11□□□□□ -0.79
USP30-210ENST00000539121 ATP7AQ04656 1500 aa10.1□□□□□ -0.79
USP30-210ENST00000539121 MTUS2Q5JR59 1369 aa10.1□□□□□ -0.79
USP30-210ENST00000539121 A2MP01023 1474 aa10.1□□□□□ -0.79
USP30-210ENST00000539121 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
USP30-210ENST00000539121 LTBP4Q8N2S1 1624 aa10.09□□□□□ -0.79
USP30-210ENST00000539121 PKD2Q13563 968 aa10.09□□□□□ -0.79
USP30-210ENST00000539121 SUPT6HQ7KZ85 1726 aaKnown RBP10.08□□□□□ -0.8
USP30-210ENST00000539121 INO80Q9ULG1 1556 aaPredicted RBP10.08□□□□□ -0.8
USP30-210ENST00000539121 CAMSAP1Q5T5Y3 1602 aa10.07□□□□□ -0.8
USP30-210ENST00000539121 PLA2R1Q13018 1463 aa10.07□□□□□ -0.8
USP30-210ENST00000539121 GGT6Q6P531 493 aa10.07□□□□□ -0.8
USP30-210ENST00000539121 RTEL1-TNFRSF6BF6WH68 1400 aa10.07□□□□□ -0.8
USP30-210ENST00000539121 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
USP30-210ENST00000539121 DISP3Q9P2K9 1392 aa10.06□□□□□ -0.8
USP30-210ENST00000539121 RSPH4AQ5TD94 716 aa10.06□□□□□ -0.8
USP30-210ENST00000539121 ADGBQ8N7X0 1667 aa10.06□□□□□ -0.8
USP30-210ENST00000539121 MBD5Q9P267 1494 aa10.05□□□□□ -0.8
USP30-210ENST00000539121 CEP162Q5TB80 1403 aa10.05□□□□□ -0.8
USP30-210ENST00000539121 ZNF142P52746 1687 aaPredicted RBP10.05□□□□□ -0.8
USP30-210ENST00000539121 CLTCQ00610 1675 aaKnown RBP10.05□□□□□ -0.8
USP30-210ENST00000539121 DHX29Q7Z478 1369 aaKnown RBP10.04□□□□□ -0.8
USP30-210ENST00000539121 ZNF644Q9H582 1327 aaPredicted RBP10.04□□□□□ -0.8
USP30-210ENST00000539121 NCKAP5LQ9HCH0 1330 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms