RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 ROCK1Q13464 1354 aa29.83■■■□□ 2.37
DDX55-205ENST00000538744 RRP7BPQ9NSQ0 103 aa29.82■■■□□ 2.36
DDX55-205ENST00000538744 UHRF1BP1LA0JNW5 1464 aa29.81■■■□□ 2.36
DDX55-205ENST00000538744 CROCC2H7BZ55 1655 aa29.8■■■□□ 2.36
DDX55-205ENST00000538744 ZNF316A6NFI3 1004 aaPredicted RBP29.8■■■□□ 2.36
DDX55-205ENST00000538744 ADGBQ8N7X0 1667 aa29.79■■■□□ 2.36
DDX55-205ENST00000538744 KDM6BO15054 1643 aa29.74■■■□□ 2.35
DDX55-205ENST00000538744 ZCCHC11Q5TAX3 1644 aaKnown RBP29.74■■■□□ 2.35
DDX55-205ENST00000538744 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
DDX55-205ENST00000538744 ZNF777Q9ULD5 760 aaPredicted RBP29.71■■■□□ 2.35
DDX55-205ENST00000538744 ACIN1Q9UKV3 1341 aaKnown RBP29.7■■■□□ 2.35
DDX55-205ENST00000538744 KDM5BQ9UGL1 1544 aa29.7■■■□□ 2.34
DDX55-205ENST00000538744 CDC42BPBQ9Y5S2 1711 aa29.69■■■□□ 2.34
DDX55-205ENST00000538744 ADGRL2O95490 1459 aa29.68■■■□□ 2.34
DDX55-205ENST00000538744 TTC37Q6PGP7 1564 aa29.66■■■□□ 2.34
DDX55-205ENST00000538744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.65■■■□□ 2.34
DDX55-205ENST00000538744 TIMELESSQ9UNS1 1208 aa29.65■■■□□ 2.34
DDX55-205ENST00000538744 SIN3AQ96ST3 1273 aa29.64■■■□□ 2.34
DDX55-205ENST00000538744 SHANK2Q9UPX8 1470 aa29.64■■■□□ 2.34
DDX55-205ENST00000538744 MYO5CQ9NQX4 1742 aa29.63■■■□□ 2.33
DDX55-205ENST00000538744 ARHGEF5Q12774 1597 aa29.63■■■□□ 2.33
DDX55-205ENST00000538744 DIEXFQ68CQ4 756 aaKnown RBP29.62■■■□□ 2.33
DDX55-205ENST00000538744 NCOA1Q15788 1441 aa29.61■■■□□ 2.33
DDX55-205ENST00000538744 SAMD9LQ8IVG5 1584 aa29.61■■■□□ 2.33
DDX55-205ENST00000538744 NEUROD1Q13562 356 aa29.6■■■□□ 2.33
DDX55-205ENST00000538744 OSCARQ8IYS5 282 aa29.59■■■□□ 2.33
DDX55-205ENST00000538744 TRIM52Q96A61 297 aa29.59■■■□□ 2.33
DDX55-205ENST00000538744 ANKRD30AQ9BXX3 1397 aa29.57■■■□□ 2.32
DDX55-205ENST00000538744 ARHGAP5Q13017 1502 aa29.55■■■□□ 2.32
DDX55-205ENST00000538744 C9orf84Q5VXU9 1444 aa29.54■■■□□ 2.32
DDX55-205ENST00000538744 DENND4BO75064 1496 aaPredicted RBP29.53■■■□□ 2.32
DDX55-205ENST00000538744 MBD5Q9P267 1494 aa29.52■■■□□ 2.32
DDX55-205ENST00000538744 CCDC141Q6ZP82 1450 aa29.5■■■□□ 2.31
DDX55-205ENST00000538744 MPHOSPH9Q99550 1183 aa29.48■■■□□ 2.31
DDX55-205ENST00000538744 TSPY4P0CV99 314 aa29.47■■■□□ 2.31
DDX55-205ENST00000538744 TSPY10P0CW01 314 aa29.47■■■□□ 2.31
DDX55-205ENST00000538744 KCNH8Q96L42 1107 aa29.47■■■□□ 2.31
DDX55-205ENST00000538744 PLEKHH2Q8IVE3 1493 aa29.47■■■□□ 2.31
DDX55-205ENST00000538744 TONSLQ96HA7 1378 aa29.46■■■□□ 2.31
DDX55-205ENST00000538744 HNRNPMP52272 730 aaKnown RBP eCLIP29.46■■■□□ 2.31
DDX55-205ENST00000538744 RSPH4AQ5TD94 716 aa29.46■■■□□ 2.31
DDX55-205ENST00000538744 SYCP2Q9BX26 1530 aa29.45■■■□□ 2.31
DDX55-205ENST00000538744 PLCH2O75038 1416 aa29.43■■■□□ 2.3
DDX55-205ENST00000538744 ANKRD50Q9ULJ7 1429 aa29.42■■■□□ 2.3
DDX55-205ENST00000538744 WDR7Q9Y4E6 1490 aa29.42■■■□□ 2.3
DDX55-205ENST00000538744 MAST1Q9Y2H9 1570 aa29.42■■■□□ 2.3
DDX55-205ENST00000538744 KIAA1107Q9UPP5 1409 aa29.42■■■□□ 2.3
DDX55-205ENST00000538744 PPP1R15AO75807 674 aaPredicted RBP29.39■■■□□ 2.3
DDX55-205ENST00000538744 ARAP3Q8WWN8 1544 aa29.38■■■□□ 2.29
DDX55-205ENST00000538744 PZPP20742 1482 aa29.38■■■□□ 2.29
DDX55-205ENST00000538744 KIF15Q9NS87 1388 aa29.35■■■□□ 2.29
DDX55-205ENST00000538744 SLC4A1APQ9BWU0 796 aaKnown RBP29.34■■■□□ 2.29
DDX55-205ENST00000538744 EFCAB2Q5VUJ9 269 aa29.33■■■□□ 2.29
DDX55-205ENST00000538744 ABCC1P33527 1531 aa29.32■■■□□ 2.28
DDX55-205ENST00000538744 ABCA9Q8IUA7 1624 aa29.32■■■□□ 2.28
DDX55-205ENST00000538744 PLXNC1O60486 1568 aa29.31■■■□□ 2.28
DDX55-205ENST00000538744 ANKRD30BQ9BXX2 1392 aa29.31■■■□□ 2.28
DDX55-205ENST00000538744 KDM5DQ9BY66 1539 aa29.29■■■□□ 2.28
DDX55-205ENST00000538744 ARHGEF12Q9NZN5 1544 aa29.29■■■□□ 2.28
DDX55-205ENST00000538744 ASXL2Q76L83 1435 aa29.28■■■□□ 2.28
DDX55-205ENST00000538744 FOXD1Q16676 465 aa29.26■■■□□ 2.27
DDX55-205ENST00000538744 RPRD2Q5VT52 1461 aaKnown RBP29.24■■■□□ 2.27
DDX55-205ENST00000538744 NPM1P06748 294 aaKnown RBP eCLIP29.21■■■□□ 2.27
DDX55-205ENST00000538744 NUP155O75694 1391 aa29.2■■■□□ 2.26
DDX55-205ENST00000538744 UNC13BO14795 1591 aa29.17■■■□□ 2.26
DDX55-205ENST00000538744 DUOX2Q9NRD8 1548 aa29.17■■■□□ 2.26
DDX55-205ENST00000538744 FANCAO15360 1455 aa29.15■■■□□ 2.26
DDX55-205ENST00000538744 TRAPPC8Q9Y2L5 1435 aa29.14■■■□□ 2.26
DDX55-205ENST00000538744 PKD2Q13563 968 aa29.14■■■□□ 2.26
DDX55-205ENST00000538744 TEX14Q8IWB6 1497 aa29.12■■■□□ 2.25
DDX55-205ENST00000538744 ERBINQ96RT1 1412 aa29.1■■■□□ 2.25
DDX55-205ENST00000538744 FAM135AQ9P2D6 1515 aa29.09■■■□□ 2.25
DDX55-205ENST00000538744 RTEL1-TNFRSF6BF6WH68 1400 aa29.09■■■□□ 2.25
DDX55-205ENST00000538744 L3MBTL2Q969R5 705 aa29.08■■■□□ 2.25
DDX55-205ENST00000538744 MIER1Q8N108 512 aa29.08■■■□□ 2.25
DDX55-205ENST00000538744 ZFYVE16Q7Z3T8 1539 aa29.07■■■□□ 2.24
DDX55-205ENST00000538744 ADGRL1O94910 1474 aa29.04■■■□□ 2.24
DDX55-205ENST00000538744 IQGAP3Q86VI3 1631 aa29.04■■■□□ 2.24
DDX55-205ENST00000538744 SPAG9O60271 1321 aaKnown RBP29.04■■■□□ 2.24
DDX55-205ENST00000538744 CFAP74Q9C0B2 1584 aa29.04■■■□□ 2.24
DDX55-205ENST00000538744 INO80Q9ULG1 1556 aaPredicted RBP29.03■■■□□ 2.24
DDX55-205ENST00000538744 MAGI2Q86UL8 1455 aa29.01■■■□□ 2.24
DDX55-205ENST00000538744 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
DDX55-205ENST00000538744 SCAPERQ9BY12 1400 aa28.99■■■□□ 2.23
DDX55-205ENST00000538744 AFAP1Q8N556 730 aa28.98■■■□□ 2.23
DDX55-205ENST00000538744 RIMBP3CA6NJZ7 1639 aa28.96■■■□□ 2.23
DDX55-205ENST00000538744 RIMBP3BA6NNM3 1639 aa28.96■■■□□ 2.23
DDX55-205ENST00000538744 RIMBP3Q9UFD9 1639 aa28.96■■■□□ 2.23
DDX55-205ENST00000538744 CD109Q6YHK3 1445 aa28.95■■■□□ 2.23
DDX55-205ENST00000538744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.91■■■□□ 2.226e-7■■■□□ 19.2
DDX55-205ENST00000538744 HIRIP3Q9BW71 556 aaPredicted RBP28.91■■■□□ 2.22
DDX55-205ENST00000538744 DEPDC5O75140 1603 aa28.88■■■□□ 2.21
DDX55-205ENST00000538744 ZNF518AQ6AHZ1 1483 aa28.88■■■□□ 2.21
DDX55-205ENST00000538744 NBPF8Q3BBV2 869 aa28.87■■■□□ 2.21
DDX55-205ENST00000538744 EIF2AK4Q9P2K8 1649 aaKnown RBP28.86■■■□□ 2.21
DDX55-205ENST00000538744 KIDINS220Q9ULH0 1771 aa28.85■■■□□ 2.21
DDX55-205ENST00000538744 EIF4G2P78344 907 aaKnown RBP eCLIP28.83■■■□□ 2.21
DDX55-205ENST00000538744 CYB5RLQ6IPT4 315 aa28.83■■■□□ 2.21
DDX55-205ENST00000538744 DDX10Q13206 875 aaKnown RBP28.82■■■□□ 2.2
DDX55-205ENST00000538744 CCDC144AA2RUR9 1427 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms