RNA–Protein interactions for RNA: ENST00000538503.5

KDM2B-209, Transcript of lysine demethylase 2B, humanhuman

TSL 5

Gene KDM2B, Length 6,676 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-209ENST00000538503 CASC1Q6TDU7 716 aa17.34■□□□□ 0.37
KDM2B-209ENST00000538503 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
KDM2B-209ENST00000538503 SOGA1O94964 1423 aa17.33■□□□□ 0.37
KDM2B-209ENST00000538503 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.37
KDM2B-209ENST00000538503 ZRSR1Q15695 479 aaKnown RBP17.32■□□□□ 0.36
KDM2B-209ENST00000538503 AMPHP49418 695 aa17.32■□□□□ 0.36
KDM2B-209ENST00000538503 CUX2O14529 1486 aa17.32■□□□□ 0.36
KDM2B-209ENST00000538503 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
KDM2B-209ENST00000538503 PSME1Q06323 249 aa17.31■□□□□ 0.36
KDM2B-209ENST00000538503 SPAG9O60271 1321 aaKnown RBP17.31■□□□□ 0.36
KDM2B-209ENST00000538503 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
KDM2B-209ENST00000538503 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
KDM2B-209ENST00000538503 KCNJ4P48050 445 aa17.29■□□□□ 0.36
KDM2B-209ENST00000538503 NBR1Q14596 966 aa17.29■□□□□ 0.36
KDM2B-209ENST00000538503 GORABQ5T7V8 394 aa17.29■□□□□ 0.36
KDM2B-209ENST00000538503 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
KDM2B-209ENST00000538503 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.36
KDM2B-209ENST00000538503 VPS53Q5VIR6 699 aa17.25■□□□□ 0.35
KDM2B-209ENST00000538503 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
KDM2B-209ENST00000538503 PROSER2Q86WR7 435 aaPredicted RBP17.22■□□□□ 0.35
KDM2B-209ENST00000538503 JPH4Q96JJ6 628 aa17.22■□□□□ 0.35
KDM2B-209ENST00000538503 RAD21O60216 631 aa17.2■□□□□ 0.34
KDM2B-209ENST00000538503 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
KDM2B-209ENST00000538503 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
KDM2B-209ENST00000538503 CARMIL1Q5VZK9 1371 aa17.2■□□□□ 0.34
KDM2B-209ENST00000538503 NOL10Q9BSC4 688 aaKnown RBP17.19■□□□□ 0.34
KDM2B-209ENST00000538503 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
KDM2B-209ENST00000538503 TPRNQ4KMQ1 711 aa17.19■□□□□ 0.34
KDM2B-209ENST00000538503 DCAF11Q8TEB1 546 aa17.18■□□□□ 0.34
KDM2B-209ENST00000538503 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
KDM2B-209ENST00000538503 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
KDM2B-209ENST00000538503 TCEAL9Q9UHQ7 104 aa17.16■□□□□ 0.34
KDM2B-209ENST00000538503 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
KDM2B-209ENST00000538503 GLIPR1L2Q4G1C9 344 aa17.15■□□□□ 0.34
KDM2B-209ENST00000538503 TMF1P82094 1093 aa17.15■□□□□ 0.34
KDM2B-209ENST00000538503 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
KDM2B-209ENST00000538503 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
KDM2B-209ENST00000538503 HNRNPMP52272 730 aaKnown RBP eCLIP17.14■□□□□ 0.33
KDM2B-209ENST00000538503 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
KDM2B-209ENST00000538503 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
KDM2B-209ENST00000538503 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
KDM2B-209ENST00000538503 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
KDM2B-209ENST00000538503 PTPRGP23470 1445 aa17.12■□□□□ 0.33
KDM2B-209ENST00000538503 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
KDM2B-209ENST00000538503 STRN4Q9NRL3 753 aa17.11■□□□□ 0.33
KDM2B-209ENST00000538503 PDE3BQ13370 1112 aa17.11■□□□□ 0.33
KDM2B-209ENST00000538503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.11■□□□□ 0.334e-6■■□□□ 11.7
KDM2B-209ENST00000538503 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
KDM2B-209ENST00000538503 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
KDM2B-209ENST00000538503 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
KDM2B-209ENST00000538503 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
KDM2B-209ENST00000538503 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.33
KDM2B-209ENST00000538503 AMOTL1Q8IY63 956 aa17.07■□□□□ 0.32
KDM2B-209ENST00000538503 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
KDM2B-209ENST00000538503 POGZQ7Z3K3 1410 aa17.07■□□□□ 0.32
KDM2B-209ENST00000538503 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
KDM2B-209ENST00000538503 VPS37DQ86XT2 251 aa17.06■□□□□ 0.32
KDM2B-209ENST00000538503 MARCH6O60337 910 aa17.05■□□□□ 0.32
KDM2B-209ENST00000538503 NGEFQ8N5V2 710 aa17.04■□□□□ 0.32
KDM2B-209ENST00000538503 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
KDM2B-209ENST00000538503 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
KDM2B-209ENST00000538503 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
KDM2B-209ENST00000538503 WDHD1O75717 1129 aaPredicted RBP17.03■□□□□ 0.32
KDM2B-209ENST00000538503 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.32
KDM2B-209ENST00000538503 STK31Q9BXU1 1019 aa17.02■□□□□ 0.32
KDM2B-209ENST00000538503 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.31
KDM2B-209ENST00000538503 TOMM22Q9NS69 142 aa17.02■□□□□ 0.31
KDM2B-209ENST00000538503 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
KDM2B-209ENST00000538503 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
KDM2B-209ENST00000538503 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
KDM2B-209ENST00000538503 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
KDM2B-209ENST00000538503 HMGB2P26583 209 aaKnown RBP16.99■□□□□ 0.31
KDM2B-209ENST00000538503 EIF3AQ14152 1382 aaKnown RBP16.99■□□□□ 0.31
KDM2B-209ENST00000538503 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
KDM2B-209ENST00000538503 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
KDM2B-209ENST00000538503 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
KDM2B-209ENST00000538503 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
KDM2B-209ENST00000538503 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
KDM2B-209ENST00000538503 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
KDM2B-209ENST00000538503 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
KDM2B-209ENST00000538503 NGLY1Q96IV0 654 aa16.95■□□□□ 0.3
KDM2B-209ENST00000538503 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
KDM2B-209ENST00000538503 ANKRD30AQ9BXX3 1397 aa16.94■□□□□ 0.3
KDM2B-209ENST00000538503 GRM1Q13255 1194 aa16.94■□□□□ 0.3
KDM2B-209ENST00000538503 COG3Q96JB2 828 aa16.94■□□□□ 0.3
KDM2B-209ENST00000538503 GPRASP1Q5JY77 1395 aa16.93■□□□□ 0.3
KDM2B-209ENST00000538503 EEA1Q15075 1411 aa16.93■□□□□ 0.3
KDM2B-209ENST00000538503 PKD2Q13563 968 aa16.93■□□□□ 0.3
KDM2B-209ENST00000538503 HDAC5Q9UQL6 1122 aa16.93■□□□□ 0.3
KDM2B-209ENST00000538503 TEFQ10587 303 aa16.92■□□□□ 0.3
KDM2B-209ENST00000538503 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
KDM2B-209ENST00000538503 MS4A1P11836 297 aa16.92■□□□□ 0.3
KDM2B-209ENST00000538503 VGFO15240 615 aaPredicted RBP16.92■□□□□ 0.3
KDM2B-209ENST00000538503 APBB1O00213 710 aa16.91■□□□□ 0.3
KDM2B-209ENST00000538503 GPATCH3Q96I76 525 aa16.91■□□□□ 0.3
KDM2B-209ENST00000538503 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
KDM2B-209ENST00000538503 RSPH4AQ5TD94 716 aa16.91■□□□□ 0.3
KDM2B-209ENST00000538503 TOM1O60784 492 aa16.9■□□□□ 0.3
KDM2B-209ENST00000538503 NUP155O75694 1391 aa16.9■□□□□ 0.3
KDM2B-209ENST00000538503 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms