RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 EEA1Q15075 1411 aa14.39□□□□□ -0.11
LINC00346-201ENST00000538077 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
LINC00346-201ENST00000538077 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
LINC00346-201ENST00000538077 CARMIL1Q5VZK9 1371 aa14.37□□□□□ -0.11
LINC00346-201ENST00000538077 NUTM2FA1L443 756 aa14.37□□□□□ -0.11
LINC00346-201ENST00000538077 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
LINC00346-201ENST00000538077 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
LINC00346-201ENST00000538077 TNIKQ9UKE5 1360 aa14.35□□□□□ -0.11
LINC00346-201ENST00000538077 PKD2Q13563 968 aa14.35□□□□□ -0.11
LINC00346-201ENST00000538077 CHMP3Q9Y3E7 222 aa14.35□□□□□ -0.11
LINC00346-201ENST00000538077 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
LINC00346-201ENST00000538077 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
LINC00346-201ENST00000538077 SOGA1O94964 1423 aa14.33□□□□□ -0.11
LINC00346-201ENST00000538077 HSPA5P11021 654 aaKnown RBP14.32□□□□□ -0.12
LINC00346-201ENST00000538077 LTV1Q96GA3 475 aaPredicted RBP14.31□□□□□ -0.12
LINC00346-201ENST00000538077 GNL2Q13823 731 aaKnown RBP14.31□□□□□ -0.12
LINC00346-201ENST00000538077 ROCK2O75116 1388 aaKnown RBP14.31□□□□□ -0.12
LINC00346-201ENST00000538077 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINC00346-201ENST00000538077 ARHGAP35Q9NRY4 1499 aa14.3□□□□□ -0.12
LINC00346-201ENST00000538077 SMARCA4P51532 1647 aa14.29□□□□□ -0.12
LINC00346-201ENST00000538077 GOLGA6L4A6NEF3 574 aa14.29□□□□□ -0.12
LINC00346-201ENST00000538077 U2AF1L5P0DN76 240 aaPredicted RBP14.28□□□□□ -0.12
LINC00346-201ENST00000538077 U2AF1Q01081 240 aaKnown RBP eCLIP14.28□□□□□ -0.12
LINC00346-201ENST00000538077 ITPRIPQ8IWB1 547 aa14.28□□□□□ -0.12
LINC00346-201ENST00000538077 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
LINC00346-201ENST00000538077 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
LINC00346-201ENST00000538077 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
LINC00346-201ENST00000538077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.28□□□□□ -0.12
LINC00346-201ENST00000538077 PPP4R2Q9NY27 417 aa14.28□□□□□ -0.12
LINC00346-201ENST00000538077 HSCBQ8IWL3 235 aa14.27□□□□□ -0.12
LINC00346-201ENST00000538077 GOLGA6L6A8MZA4 724 aa14.27□□□□□ -0.13
LINC00346-201ENST00000538077 MS4A1P11836 297 aa14.27□□□□□ -0.13
LINC00346-201ENST00000538077 NAP1L5Q96NT1 182 aaPredicted RBP14.27□□□□□ -0.13
LINC00346-201ENST00000538077 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
LINC00346-201ENST00000538077 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
LINC00346-201ENST00000538077 CCDC146Q8IYE0 955 aa14.26□□□□□ -0.13
LINC00346-201ENST00000538077 KIF3BO15066 747 aa14.26□□□□□ -0.13
LINC00346-201ENST00000538077 ANP32EQ9BTT0 268 aa14.26□□□□□ -0.13
LINC00346-201ENST00000538077 G3V3G9 751 aa14.25□□□□□ -0.13
LINC00346-201ENST00000538077 MCCP23508 829 aa14.25□□□□□ -0.13
LINC00346-201ENST00000538077 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
LINC00346-201ENST00000538077 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
LINC00346-201ENST00000538077 DRC7Q8IY82 874 aa14.25□□□□□ -0.13
LINC00346-201ENST00000538077 CARMIL2Q6F5E8 1435 aa14.24□□□□□ -0.13
LINC00346-201ENST00000538077 KTN1Q86UP2 1357 aaKnown RBP14.24□□□□□ -0.13
LINC00346-201ENST00000538077 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
LINC00346-201ENST00000538077 ERICH6BQ5W0A0 696 aa14.23□□□□□ -0.13
LINC00346-201ENST00000538077 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
LINC00346-201ENST00000538077 NGDNQ8NEJ9 315 aaKnown RBP14.23□□□□□ -0.13
LINC00346-201ENST00000538077 ANO8Q9HCE9 1232 aaPredicted RBP14.23□□□□□ -0.13
LINC00346-201ENST00000538077 NUP155O75694 1391 aa14.23□□□□□ -0.13
LINC00346-201ENST00000538077 GORABQ5T7V8 394 aa14.22□□□□□ -0.13
LINC00346-201ENST00000538077 SLC4A10Q6U841 1118 aa14.22□□□□□ -0.13
LINC00346-201ENST00000538077 EID1Q9Y6B2 187 aa14.21□□□□□ -0.13
LINC00346-201ENST00000538077 SETD5Q9C0A6 1442 aa14.21□□□□□ -0.13
LINC00346-201ENST00000538077 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
LINC00346-201ENST00000538077 PDE4CQ08493 712 aa14.21□□□□□ -0.13
LINC00346-201ENST00000538077 NOP58Q9Y2X3 529 aaKnown RBP14.21□□□□□ -0.13
LINC00346-201ENST00000538077 HSP90B1P14625 803 aaKnown RBP14.2□□□□□ -0.14
LINC00346-201ENST00000538077 KIAA1211Q6ZU35 1233 aa14.2□□□□□ -0.14
LINC00346-201ENST00000538077 WASHC2CQ9Y4E1 1318 aa14.2□□□□□ -0.14
LINC00346-201ENST00000538077 MSH5O43196 834 aa14.19□□□□□ -0.14
LINC00346-201ENST00000538077 NOL8Q76FK4 1167 aaKnown RBP14.19□□□□□ -0.14
LINC00346-201ENST00000538077 MPHOSPH9Q99550 1183 aa14.19□□□□□ -0.14
LINC00346-201ENST00000538077 AMPHP49418 695 aa14.18□□□□□ -0.14
LINC00346-201ENST00000538077 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
LINC00346-201ENST00000538077 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
LINC00346-201ENST00000538077 EFCAB2Q5VUJ9 269 aa14.17□□□□□ -0.14
LINC00346-201ENST00000538077 SPAG9O60271 1321 aaKnown RBP14.16□□□□□ -0.14
LINC00346-201ENST00000538077 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
LINC00346-201ENST00000538077 TRAK1Q9UPV9 953 aa14.16□□□□□ -0.14
LINC00346-201ENST00000538077 STK31Q9BXU1 1019 aa14.14□□□□□ -0.15
LINC00346-201ENST00000538077 IPO8O15397 1037 aaKnown RBP14.14□□□□□ -0.15
LINC00346-201ENST00000538077 FRAT2O75474 233 aaPredicted RBP14.14□□□□□ -0.15
LINC00346-201ENST00000538077 MEX3CQ5U5Q3 659 aaKnown RBP14.14□□□□□ -0.15
LINC00346-201ENST00000538077 EVA1CP58658 441 aa14.13□□□□□ -0.15
LINC00346-201ENST00000538077 NGEFQ8N5V2 710 aa14.13□□□□□ -0.15
LINC00346-201ENST00000538077 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
LINC00346-201ENST00000538077 RRP7AQ9Y3A4 280 aaKnown RBP14.13□□□□□ -0.15
LINC00346-201ENST00000538077 CLUAP1Q96AJ1 413 aa14.13□□□□□ -0.15
LINC00346-201ENST00000538077 GTF2E1P29083 439 aaPredicted RBP14.13□□□□□ -0.15
LINC00346-201ENST00000538077 VPS53Q5VIR6 699 aa14.13□□□□□ -0.15
LINC00346-201ENST00000538077 AEBP2Q6ZN18 517 aaPredicted RBP14.13□□□□□ -0.15
LINC00346-201ENST00000538077 CREBRFQ8IUR6 639 aa14.13□□□□□ -0.15
LINC00346-201ENST00000538077 PRM3Q9NNZ6 103 aa14.13□□□□□ -0.15
LINC00346-201ENST00000538077 MFAP1P55081 439 aaKnown RBP14.12□□□□□ -0.15
LINC00346-201ENST00000538077 GZF1Q9H116 711 aaPredicted RBP14.12□□□□□ -0.15
LINC00346-201ENST00000538077 TOMM22Q9NS69 142 aa14.12□□□□□ -0.15
LINC00346-201ENST00000538077 ANKRD30AQ9BXX3 1397 aa14.12□□□□□ -0.15
LINC00346-201ENST00000538077 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
LINC00346-201ENST00000538077 EIF3AQ14152 1382 aaKnown RBP14.12□□□□□ -0.15
LINC00346-201ENST00000538077 FHOD3Q2V2M9 1422 aa14.11□□□□□ -0.15
LINC00346-201ENST00000538077 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
LINC00346-201ENST00000538077 ARID3AQ99856 593 aa14.1□□□□□ -0.15
LINC00346-201ENST00000538077 RAB3GAP2Q9H2M9 1393 aa14.1□□□□□ -0.15
LINC00346-201ENST00000538077 NRDCO43847 1150 aa14.09□□□□□ -0.15
LINC00346-201ENST00000538077 KLHL34Q8N239 644 aa14.09□□□□□ -0.15
LINC00346-201ENST00000538077 TERF2IPQ9NYB0 399 aa14.09□□□□□ -0.15
LINC00346-201ENST00000538077 RCAN3Q9UKA8 241 aa14.09□□□□□ -0.15
LINC00346-201ENST00000538077 FOXD4L5Q5VV16 416 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms