RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
SEMA4D-221ENST00000537934 FGD6Q6ZV73 1430 aa15.78■□□□□ 0.12
SEMA4D-221ENST00000537934 UACAQ9BZF9 1416 aa15.78■□□□□ 0.12
SEMA4D-221ENST00000537934 UBE2Q2Q8WVN8 375 aa15.77■□□□□ 0.12
SEMA4D-221ENST00000537934 TRIM52Q96A61 297 aa15.77■□□□□ 0.12
SEMA4D-221ENST00000537934 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.11
SEMA4D-221ENST00000537934 TROQ12816 1431 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-221ENST00000537934 DDX10Q13206 875 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-221ENST00000537934 ABCC2Q92887 1545 aa15.73■□□□□ 0.11
SEMA4D-221ENST00000537934 KIF14Q15058 1648 aa15.72■□□□□ 0.11
SEMA4D-221ENST00000537934 PPP1R15AO75807 674 aaPredicted RBP15.72■□□□□ 0.11
SEMA4D-221ENST00000537934 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
SEMA4D-221ENST00000537934 PLEKHD1A6NEE1 506 aa15.71■□□□□ 0.11
SEMA4D-221ENST00000537934 PTPN23Q9H3S7 1636 aa15.69■□□□□ 0.1
SEMA4D-221ENST00000537934 NBR1Q14596 966 aa15.68■□□□□ 0.1
SEMA4D-221ENST00000537934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.68■□□□□ 0.1
SEMA4D-221ENST00000537934 ADCY10Q96PN6 1610 aa15.67■□□□□ 0.1
SEMA4D-221ENST00000537934 ANP32CO43423 234 aa15.67■□□□□ 0.1
SEMA4D-221ENST00000537934 PTPRKQ15262 1439 aa15.65■□□□□ 0.1
SEMA4D-221ENST00000537934 PPP4R2Q9NY27 417 aa15.65■□□□□ 0.1
SEMA4D-221ENST00000537934 UHRF1BP1LA0JNW5 1464 aa15.64■□□□□ 0.09
SEMA4D-221ENST00000537934 ZNF644Q9H582 1327 aaPredicted RBP15.64■□□□□ 0.09
SEMA4D-221ENST00000537934 MIA2Q96PC5 1412 aa15.64■□□□□ 0.09
SEMA4D-221ENST00000537934 ZCCHC11Q5TAX3 1644 aaKnown RBP15.64■□□□□ 0.09
SEMA4D-221ENST00000537934 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
SEMA4D-221ENST00000537934 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
SEMA4D-221ENST00000537934 KDM5BQ9UGL1 1544 aa15.62■□□□□ 0.09
SEMA4D-221ENST00000537934 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
SEMA4D-221ENST00000537934 IL27Q8NEV9 243 aa15.62■□□□□ 0.09
SEMA4D-221ENST00000537934 ABCC10Q5T3U5 1492 aa15.62■□□□□ 0.09
SEMA4D-221ENST00000537934 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
SEMA4D-221ENST00000537934 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
SEMA4D-221ENST00000537934 CFDP1Q9UEE9 299 aaPredicted RBP15.6■□□□□ 0.09
SEMA4D-221ENST00000537934 RAB3GAP2Q9H2M9 1393 aa15.6■□□□□ 0.09
SEMA4D-221ENST00000537934 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
SEMA4D-221ENST00000537934 ITSN2Q9NZM3 1697 aa15.59■□□□□ 0.09
SEMA4D-221ENST00000537934 MAPKBP1O60336 1514 aa15.59■□□□□ 0.09
SEMA4D-221ENST00000537934 ZNF777Q9ULD5 760 aaPredicted RBP15.59■□□□□ 0.09
SEMA4D-221ENST00000537934 CHIC2Q9UKJ5 165 aa15.58■□□□□ 0.08
SEMA4D-221ENST00000537934 SETD5Q9C0A6 1442 aa15.57■□□□□ 0.08
SEMA4D-221ENST00000537934 CAMSAP2Q08AD1 1489 aa15.56■□□□□ 0.08
SEMA4D-221ENST00000537934 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.56■□□□□ 0.08
SEMA4D-221ENST00000537934 TTC37Q6PGP7 1564 aa15.56■□□□□ 0.08
SEMA4D-221ENST00000537934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
SEMA4D-221ENST00000537934 DAPK1P53355 1430 aa15.53■□□□□ 0.08
SEMA4D-221ENST00000537934 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.08
SEMA4D-221ENST00000537934 ABCC5O15440 1437 aa15.52■□□□□ 0.08
SEMA4D-221ENST00000537934 HNRNPUQ00839 825 aaKnown RBP eCLIP15.52■□□□□ 0.08
SEMA4D-221ENST00000537934 IPO9Q96P70 1041 aaKnown RBP15.52■□□□□ 0.08
SEMA4D-221ENST00000537934 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.08
SEMA4D-221ENST00000537934 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
SEMA4D-221ENST00000537934 DNMT1P26358 1616 aaKnown RBP15.51■□□□□ 0.07
SEMA4D-221ENST00000537934 TIMELESSQ9UNS1 1208 aa15.51■□□□□ 0.07
SEMA4D-221ENST00000537934 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
SEMA4D-221ENST00000537934 NAIPQ13075 1403 aa15.51■□□□□ 0.07
SEMA4D-221ENST00000537934 PREX2Q70Z35 1606 aa15.5■□□□□ 0.07
SEMA4D-221ENST00000537934 WASHC2AQ641Q2 1341 aa15.5■□□□□ 0.07
SEMA4D-221ENST00000537934 WDR7Q9Y4E6 1490 aa15.49■□□□□ 0.07
SEMA4D-221ENST00000537934 ANP32AP39687 249 aaKnown RBP15.48■□□□□ 0.07
SEMA4D-221ENST00000537934 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
SEMA4D-221ENST00000537934 RIMBP3CA6NJZ7 1639 aa15.48■□□□□ 0.07
SEMA4D-221ENST00000537934 RIMBP3BA6NNM3 1639 aa15.48■□□□□ 0.07
SEMA4D-221ENST00000537934 RIMBP3Q9UFD9 1639 aa15.48■□□□□ 0.07
SEMA4D-221ENST00000537934 ASXL2Q76L83 1435 aa15.47■□□□□ 0.07
SEMA4D-221ENST00000537934 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
SEMA4D-221ENST00000537934 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
SEMA4D-221ENST00000537934 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
SEMA4D-221ENST00000537934 ARHGAP5Q13017 1502 aa15.47■□□□□ 0.07
SEMA4D-221ENST00000537934 MYO5CQ9NQX4 1742 aa15.47■□□□□ 0.07
SEMA4D-221ENST00000537934 SAMD9LQ8IVG5 1584 aa15.47■□□□□ 0.07
SEMA4D-221ENST00000537934 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
SEMA4D-221ENST00000537934 HNRNPMP52272 730 aaKnown RBP eCLIP15.45■□□□□ 0.06
SEMA4D-221ENST00000537934 KDM6BO15054 1643 aa15.44■□□□□ 0.06
SEMA4D-221ENST00000537934 GCC2Q8IWJ2 1684 aa15.44■□□□□ 0.06
SEMA4D-221ENST00000537934 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
SEMA4D-221ENST00000537934 CROCC2H7BZ55 1655 aa15.43■□□□□ 0.06
SEMA4D-221ENST00000537934 HIRIP3Q9BW71 556 aaPredicted RBP15.42■□□□□ 0.06
SEMA4D-221ENST00000537934 MBD5Q9P267 1494 aa15.42■□□□□ 0.06
SEMA4D-221ENST00000537934 PLCH2O75038 1416 aa15.42■□□□□ 0.06
SEMA4D-221ENST00000537934 SIN3AQ96ST3 1273 aa15.42■□□□□ 0.06
SEMA4D-221ENST00000537934 USP35Q9P2H5 1018 aa15.42■□□□□ 0.06
SEMA4D-221ENST00000537934 ROCK1Q13464 1354 aa15.42■□□□□ 0.06
SEMA4D-221ENST00000537934 SYCP2Q9BX26 1530 aa15.41■□□□□ 0.06
SEMA4D-221ENST00000537934 WASHC2CQ9Y4E1 1318 aa15.41■□□□□ 0.06
SEMA4D-221ENST00000537934 NCOA1Q15788 1441 aa15.39■□□□□ 0.05
SEMA4D-221ENST00000537934 ABCA9Q8IUA7 1624 aa15.38■□□□□ 0.05
SEMA4D-221ENST00000537934 C9orf84Q5VXU9 1444 aa15.38■□□□□ 0.05
SEMA4D-221ENST00000537934 ADGBQ8N7X0 1667 aa15.38■□□□□ 0.05
SEMA4D-221ENST00000537934 ARHGEF5Q12774 1597 aa15.37■□□□□ 0.05
SEMA4D-221ENST00000537934 ARHGEF12Q9NZN5 1544 aa15.37■□□□□ 0.05
SEMA4D-221ENST00000537934 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
SEMA4D-221ENST00000537934 CCDC141Q6ZP82 1450 aa15.37■□□□□ 0.05
SEMA4D-221ENST00000537934 TSPY4P0CV99 314 aa15.37■□□□□ 0.05
SEMA4D-221ENST00000537934 TSPY10P0CW01 314 aa15.37■□□□□ 0.05
SEMA4D-221ENST00000537934 ADGRL2O95490 1459 aa15.36■□□□□ 0.05
SEMA4D-221ENST00000537934 SHANK2Q9UPX8 1470 aa15.36■□□□□ 0.05
SEMA4D-221ENST00000537934 ANKRD30AQ9BXX3 1397 aa15.35■□□□□ 0.05
SEMA4D-221ENST00000537934 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.05
SEMA4D-221ENST00000537934 ABCC1P33527 1531 aa15.33■□□□□ 0.04
SEMA4D-221ENST00000537934 FANCAO15360 1455 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms