RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
LGR5-202ENST00000536515 TSHZ2Q9NRE2 1034 aa18.41■□□□□ 0.54
LGR5-202ENST00000536515 CDK13Q14004 1512 aaKnown RBP18.41■□□□□ 0.54
LGR5-202ENST00000536515 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
LGR5-202ENST00000536515 DENND4BO75064 1496 aaPredicted RBP18.37■□□□□ 0.53
LGR5-202ENST00000536515 KDM6BO15054 1643 aa18.37■□□□□ 0.53
LGR5-202ENST00000536515 AKNAQ7Z591 1439 aa18.34■□□□□ 0.53
LGR5-202ENST00000536515 MIA2Q96PC5 1412 aa18.34■□□□□ 0.53
LGR5-202ENST00000536515 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
LGR5-202ENST00000536515 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
LGR5-202ENST00000536515 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
LGR5-202ENST00000536515 HSPA5P11021 654 aaKnown RBP18.33■□□□□ 0.52
LGR5-202ENST00000536515 MPHOSPH9Q99550 1183 aa18.33■□□□□ 0.52
LGR5-202ENST00000536515 PTPRGP23470 1445 aa18.33■□□□□ 0.52
LGR5-202ENST00000536515 NEFLP07196 543 aa18.32■□□□□ 0.52
LGR5-202ENST00000536515 ABCA8O94911 1581 aa18.31■□□□□ 0.52
LGR5-202ENST00000536515 FOXD1Q16676 465 aa18.31■□□□□ 0.52
LGR5-202ENST00000536515 RAPGEF6Q8TEU7 1601 aa18.3■□□□□ 0.52
LGR5-202ENST00000536515 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
LGR5-202ENST00000536515 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
LGR5-202ENST00000536515 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
LGR5-202ENST00000536515 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
LGR5-202ENST00000536515 UHRF1BP1LA0JNW5 1464 aa18.25■□□□□ 0.51
LGR5-202ENST00000536515 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
LGR5-202ENST00000536515 DAPK1P53355 1430 aa18.24■□□□□ 0.51
LGR5-202ENST00000536515 ABCC2Q92887 1545 aa18.24■□□□□ 0.51
LGR5-202ENST00000536515 HNRNPUQ00839 825 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■□ 21.8
LGR5-202ENST00000536515 NUP153P49790 1475 aaKnown RBP18.22■□□□□ 0.51
LGR5-202ENST00000536515 ABCC5O15440 1437 aa18.21■□□□□ 0.51
LGR5-202ENST00000536515 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
LGR5-202ENST00000536515 ADCY10Q96PN6 1610 aa18.2■□□□□ 0.5
LGR5-202ENST00000536515 ANKRD30BQ9BXX2 1392 aa18.19■□□□□ 0.5
LGR5-202ENST00000536515 DNMT1P26358 1616 aaKnown RBP18.19■□□□□ 0.5
LGR5-202ENST00000536515 C11orf95C9JLR9 678 aaPredicted RBP18.18■□□□□ 0.5
LGR5-202ENST00000536515 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
LGR5-202ENST00000536515 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
LGR5-202ENST00000536515 CDK11AQ9UQ88 783 aaPredicted RBP18.17■□□□□ 0.5
LGR5-202ENST00000536515 CNTLNQ9NXG0 1405 aa18.17■□□□□ 0.5
LGR5-202ENST00000536515 RPRD2Q5VT52 1461 aaKnown RBP18.17■□□□□ 0.5
LGR5-202ENST00000536515 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
LGR5-202ENST00000536515 CCDC7Q96M83 1385 aa18.15■□□□□ 0.5
LGR5-202ENST00000536515 CCDC184Q52MB2 194 aa18.14■□□□□ 0.49
LGR5-202ENST00000536515 NCOA1Q15788 1441 aa18.14■□□□□ 0.49
LGR5-202ENST00000536515 TEX14Q8IWB6 1497 aa18.13■□□□□ 0.49
LGR5-202ENST00000536515 ZCCHC11Q5TAX3 1644 aaKnown RBP18.12■□□□□ 0.49
LGR5-202ENST00000536515 ATP10BO94823 1461 aa18.12■□□□□ 0.49
LGR5-202ENST00000536515 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
LGR5-202ENST00000536515 PRKRIP1Q9H875 184 aaPredicted RBP18.1■□□□□ 0.49
LGR5-202ENST00000536515 TROQ12816 1431 aaPredicted RBP18.09■□□□□ 0.49
LGR5-202ENST00000536515 IRX6P78412 446 aaPredicted RBP18.09■□□□□ 0.49
LGR5-202ENST00000536515 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
LGR5-202ENST00000536515 CAMSAP2Q08AD1 1489 aa18.08■□□□□ 0.49
LGR5-202ENST00000536515 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
LGR5-202ENST00000536515 PZPP20742 1482 aa18.07■□□□□ 0.48
LGR5-202ENST00000536515 KIF7Q2M1P5 1343 aa18.06■□□□□ 0.48
LGR5-202ENST00000536515 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
LGR5-202ENST00000536515 RBM19Q9Y4C8 960 aaKnown RBP18.06■□□□□ 0.48
LGR5-202ENST00000536515 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
LGR5-202ENST00000536515 MRS2Q9HD23 443 aa18.05■□□□□ 0.48
LGR5-202ENST00000536515 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
LGR5-202ENST00000536515 KIF14Q15058 1648 aa18.03■□□□□ 0.48
LGR5-202ENST00000536515 ANP32EQ9BTT0 268 aa18.03■□□□□ 0.48
LGR5-202ENST00000536515 ITSN2Q9NZM3 1697 aa18.02■□□□□ 0.48
LGR5-202ENST00000536515 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
LGR5-202ENST00000536515 ADGBQ8N7X0 1667 aa18■□□□□ 0.47
LGR5-202ENST00000536515 PKD2Q13563 968 aa17.99■□□□□ 0.47
LGR5-202ENST00000536515 KIAA1107Q9UPP5 1409 aa17.99■□□□□ 0.47
LGR5-202ENST00000536515 ADGRL2O95490 1459 aa17.98■□□□□ 0.47
LGR5-202ENST00000536515 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
LGR5-202ENST00000536515 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
LGR5-202ENST00000536515 WDR7Q9Y4E6 1490 aa17.97■□□□□ 0.47
LGR5-202ENST00000536515 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
LGR5-202ENST00000536515 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
LGR5-202ENST00000536515 CROCC2H7BZ55 1655 aa17.96■□□□□ 0.46
LGR5-202ENST00000536515 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
LGR5-202ENST00000536515 POLR3GLQ9BT43 218 aa17.95■□□□□ 0.46
LGR5-202ENST00000536515 ASXL2Q76L83 1435 aa17.95■□□□□ 0.46
LGR5-202ENST00000536515 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
LGR5-202ENST00000536515 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
LGR5-202ENST00000536515 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
LGR5-202ENST00000536515 USP47Q96K76 1375 aa17.94■□□□□ 0.46
LGR5-202ENST00000536515 DHX29Q7Z478 1369 aaKnown RBP17.9■□□□□ 0.46
LGR5-202ENST00000536515 BCORL1Q5H9F3 1711 aa17.9■□□□□ 0.46
LGR5-202ENST00000536515 NUP155O75694 1391 aa17.9■□□□□ 0.46
LGR5-202ENST00000536515 ERICH6BQ5W0A0 696 aa17.9■□□□□ 0.46
LGR5-202ENST00000536515 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
LGR5-202ENST00000536515 C9orf84Q5VXU9 1444 aa17.89■□□□□ 0.45
LGR5-202ENST00000536515 CDC42BPAQ5VT25 1732 aa17.88■□□□□ 0.45
LGR5-202ENST00000536515 ABCC10Q5T3U5 1492 aa17.88■□□□□ 0.45
LGR5-202ENST00000536515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.87■□□□□ 0.45
LGR5-202ENST00000536515 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
LGR5-202ENST00000536515 KDM5CP41229 1560 aa17.86■□□□□ 0.45
LGR5-202ENST00000536515 TTC37Q6PGP7 1564 aa17.86■□□□□ 0.45
LGR5-202ENST00000536515 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
LGR5-202ENST00000536515 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
LGR5-202ENST00000536515 GLI2P10070 1586 aa17.85■□□□□ 0.45
LGR5-202ENST00000536515 SHANK2Q9UPX8 1470 aa17.84■□□□□ 0.45
LGR5-202ENST00000536515 DIP2BQ9P265 1576 aa17.84■□□□□ 0.45
LGR5-202ENST00000536515 HNRNPMP52272 730 aaKnown RBP eCLIP17.84■□□□□ 0.45
LGR5-202ENST00000536515 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms