RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
LMO3-214ENST00000536509 HECW1Q76N89 1606 aa18.41■□□□□ 0.54
LMO3-214ENST00000536509 RIMS1Q86UR5 1692 aaKnown RBP18.41■□□□□ 0.54
LMO3-214ENST00000536509 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
LMO3-214ENST00000536509 PLCH2O75038 1416 aa18.4■□□□□ 0.54
LMO3-214ENST00000536509 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
LMO3-214ENST00000536509 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
LMO3-214ENST00000536509 MYO5CQ9NQX4 1742 aa18.39■□□□□ 0.53
LMO3-214ENST00000536509 UBTFP17480 764 aaKnown RBP18.38■□□□□ 0.53
LMO3-214ENST00000536509 LMTK3Q96Q04 1460 aa18.37■□□□□ 0.53
LMO3-214ENST00000536509 FBXO41Q8TF61 875 aa18.36■□□□□ 0.53
LMO3-214ENST00000536509 SCAPERQ9BY12 1400 aa18.36■□□□□ 0.53
LMO3-214ENST00000536509 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
LMO3-214ENST00000536509 YEATS2Q9ULM3 1422 aa18.34■□□□□ 0.53
LMO3-214ENST00000536509 EFCAB2Q5VUJ9 269 aa18.34■□□□□ 0.53
LMO3-214ENST00000536509 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.53
LMO3-214ENST00000536509 FER1L4A9Z1Z3 1794 aa18.33■□□□□ 0.53
LMO3-214ENST00000536509 KIF14Q15058 1648 aa18.33■□□□□ 0.52
LMO3-214ENST00000536509 ATP1B4Q9UN42 357 aaPredicted RBP18.32■□□□□ 0.52
LMO3-214ENST00000536509 SIGLEC1Q9BZZ2 1709 aa18.32■□□□□ 0.52
LMO3-214ENST00000536509 ATP10AO60312 1499 aa18.31■□□□□ 0.52
LMO3-214ENST00000536509 CLIP1P30622 1438 aa18.31■□□□□ 0.52
LMO3-214ENST00000536509 ZNF518AQ6AHZ1 1483 aa18.29■□□□□ 0.52
LMO3-214ENST00000536509 TROQ12816 1431 aaPredicted RBP18.29■□□□□ 0.52
LMO3-214ENST00000536509 C9orf84Q5VXU9 1444 aa18.29■□□□□ 0.52
LMO3-214ENST00000536509 ARHGAP5Q13017 1502 aa18.26■□□□□ 0.51
LMO3-214ENST00000536509 ARHGEF12Q9NZN5 1544 aa18.26■□□□□ 0.51
LMO3-214ENST00000536509 KDM5CP41229 1560 aa18.25■□□□□ 0.51
LMO3-214ENST00000536509 LRRIQ1Q96JM4 1722 aa18.24■□□□□ 0.51
LMO3-214ENST00000536509 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
LMO3-214ENST00000536509 MLECQ14165 292 aa18.23■□□□□ 0.51
LMO3-214ENST00000536509 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
LMO3-214ENST00000536509 PREX1Q8TCU6 1659 aa18.22■□□□□ 0.51
LMO3-214ENST00000536509 CCDC18Q5T9S5 1454 aa18.22■□□□□ 0.51
LMO3-214ENST00000536509 CDC42BPBQ9Y5S2 1711 aa18.22■□□□□ 0.51
LMO3-214ENST00000536509 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
LMO3-214ENST00000536509 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
LMO3-214ENST00000536509 SETD1BQ9UPS6 1966 aaKnown RBP18.21■□□□□ 0.5
LMO3-214ENST00000536509 HSPA2P54652 639 aa18.2■□□□□ 0.5
LMO3-214ENST00000536509 PREX2Q70Z35 1606 aa18.2■□□□□ 0.5
LMO3-214ENST00000536509 CASKIN1Q8WXD9 1431 aa18.19■□□□□ 0.5
LMO3-214ENST00000536509 MLH3Q9UHC1 1453 aa18.18■□□□□ 0.5
LMO3-214ENST00000536509 AFAP1Q8N556 730 aa18.17■□□□□ 0.5
LMO3-214ENST00000536509 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
LMO3-214ENST00000536509 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
LMO3-214ENST00000536509 ABCC1P33527 1531 aa18.14■□□□□ 0.49
LMO3-214ENST00000536509 ITSN2Q9NZM3 1697 aa18.14■□□□□ 0.49
LMO3-214ENST00000536509 AGLP35573 1532 aa18.13■□□□□ 0.49
LMO3-214ENST00000536509 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
LMO3-214ENST00000536509 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
LMO3-214ENST00000536509 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
LMO3-214ENST00000536509 FYCO1Q9BQS8 1478 aa18.13■□□□□ 0.49
LMO3-214ENST00000536509 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
LMO3-214ENST00000536509 CDC42BPAQ5VT25 1732 aa18.12■□□□□ 0.49
LMO3-214ENST00000536509 UHRF1BP1Q6BDS2 1440 aa18.11■□□□□ 0.49
LMO3-214ENST00000536509 CERKQ8TCT0 537 aa18.1■□□□□ 0.49
LMO3-214ENST00000536509 CEBPAP49715 358 aaPredicted RBP18.09■□□□□ 0.49
LMO3-214ENST00000536509 ESF1Q9H501 851 aaKnown RBP18.09■□□□□ 0.49
LMO3-214ENST00000536509 C3P01024 1663 aa18.09■□□□□ 0.49
LMO3-214ENST00000536509 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
LMO3-214ENST00000536509 KIDINS220Q9ULH0 1771 aa18.08■□□□□ 0.48
LMO3-214ENST00000536509 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
LMO3-214ENST00000536509 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
LMO3-214ENST00000536509 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
LMO3-214ENST00000536509 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
LMO3-214ENST00000536509 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
LMO3-214ENST00000536509 GPATCH8Q9UKJ3 1502 aaKnown RBP18.01■□□□□ 0.47
LMO3-214ENST00000536509 KIAA1107Q9UPP5 1409 aa18■□□□□ 0.47
LMO3-214ENST00000536509 PTPRTO14522 1441 aa17.99■□□□□ 0.47
LMO3-214ENST00000536509 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
LMO3-214ENST00000536509 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
LMO3-214ENST00000536509 ZNF777Q9ULD5 760 aaPredicted RBP17.98■□□□□ 0.47
LMO3-214ENST00000536509 NPATQ14207 1427 aa17.98■□□□□ 0.47
LMO3-214ENST00000536509 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
LMO3-214ENST00000536509 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
LMO3-214ENST00000536509 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
LMO3-214ENST00000536509 CFDP1Q9UEE9 299 aaPredicted RBP17.95■□□□□ 0.46
LMO3-214ENST00000536509 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
LMO3-214ENST00000536509 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
LMO3-214ENST00000536509 PLXNC1O60486 1568 aa17.93■□□□□ 0.46
LMO3-214ENST00000536509 HNRNPMP52272 730 aaKnown RBP eCLIP17.93■□□□□ 0.46
LMO3-214ENST00000536509 ADGBQ8N7X0 1667 aa17.93■□□□□ 0.46
LMO3-214ENST00000536509 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
LMO3-214ENST00000536509 NCOA1Q15788 1441 aa17.91■□□□□ 0.46
LMO3-214ENST00000536509 A2MP01023 1474 aa17.91■□□□□ 0.46
LMO3-214ENST00000536509 IQSEC2Q5JU85 1478 aa17.9■□□□□ 0.46
LMO3-214ENST00000536509 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
LMO3-214ENST00000536509 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
LMO3-214ENST00000536509 ZNF142P52746 1687 aaPredicted RBP17.88■□□□□ 0.45
LMO3-214ENST00000536509 CAMSAP1Q5T5Y3 1602 aa17.87■□□□□ 0.45
LMO3-214ENST00000536509 RTEL1-TNFRSF6BF6WH68 1400 aa17.86■□□□□ 0.45
LMO3-214ENST00000536509 TIAM1Q13009 1591 aa17.86■□□□□ 0.45
LMO3-214ENST00000536509 LTBP4Q8N2S1 1624 aa17.86■□□□□ 0.45
LMO3-214ENST00000536509 MYO3AQ8NEV4 1616 aa17.84■□□□□ 0.45
LMO3-214ENST00000536509 PLA2R1Q13018 1463 aa17.84■□□□□ 0.45
LMO3-214ENST00000536509 CEP162Q5TB80 1403 aa17.84■□□□□ 0.45
LMO3-214ENST00000536509 PKD2Q13563 968 aa17.83■□□□□ 0.44
LMO3-214ENST00000536509 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
LMO3-214ENST00000536509 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
LMO3-214ENST00000536509 GGT6Q6P531 493 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms