RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 HFM1A2PYH4 1435 aa30.7■■■□□ 2.5
TRIM3-214ENST00000536344 TCOF1Q13428 1488 aaKnown RBP30.69■■■□□ 2.5
TRIM3-214ENST00000536344 MIA2Q96PC5 1412 aa30.69■■■□□ 2.5
TRIM3-214ENST00000536344 TRIM52Q96A61 297 aa30.66■■■□□ 2.5
TRIM3-214ENST00000536344 SHROOM2Q13796 1616 aa30.64■■■□□ 2.49
TRIM3-214ENST00000536344 GPATCH8Q9UKJ3 1502 aaKnown RBP30.63■■■□□ 2.49
TRIM3-214ENST00000536344 UACAQ9BZF9 1416 aa30.62■■■□□ 2.49
TRIM3-214ENST00000536344 KCNH8Q96L42 1107 aa30.62■■■□□ 2.49
TRIM3-214ENST00000536344 KDM6BO15054 1643 aa30.6■■■□□ 2.49
TRIM3-214ENST00000536344 DAPK1P53355 1430 aa30.58■■■□□ 2.49
TRIM3-214ENST00000536344 ABCC5O15440 1437 aa30.58■■■□□ 2.49
TRIM3-214ENST00000536344 CLASP1Q7Z460 1538 aa30.56■■■□□ 2.48
TRIM3-214ENST00000536344 CAMSAP2Q08AD1 1489 aa30.55■■■□□ 2.48
TRIM3-214ENST00000536344 BCANQ96GW7 911 aa30.54■■■□□ 2.48
TRIM3-214ENST00000536344 FOXD1Q16676 465 aa30.53■■■□□ 2.48
TRIM3-214ENST00000536344 HNRNPMP52272 730 aaKnown RBP eCLIP30.49■■■□□ 2.47
TRIM3-214ENST00000536344 ADCY10Q96PN6 1610 aa30.48■■■□□ 2.47
TRIM3-214ENST00000536344 ABCC10Q5T3U5 1492 aa30.46■■■□□ 2.47
TRIM3-214ENST00000536344 CDC42BPAQ5VT25 1732 aa30.46■■■□□ 2.47
TRIM3-214ENST00000536344 DNMT1P26358 1616 aaKnown RBP30.46■■■□□ 2.47
TRIM3-214ENST00000536344 ITSN2Q9NZM3 1697 aa30.44■■■□□ 2.46
TRIM3-214ENST00000536344 ABCC2Q92887 1545 aa30.42■■■□□ 2.46
TRIM3-214ENST00000536344 GCC2Q8IWJ2 1684 aa30.39■■■□□ 2.46
TRIM3-214ENST00000536344 MPHOSPH9Q99550 1183 aa30.38■■■□□ 2.45
TRIM3-214ENST00000536344 AKNAQ7Z591 1439 aa30.36■■■□□ 2.45
TRIM3-214ENST00000536344 OSCARQ8IYS5 282 aa30.36■■■□□ 2.45
TRIM3-214ENST00000536344 HIRIP3Q9BW71 556 aaPredicted RBP30.36■■■□□ 2.45
TRIM3-214ENST00000536344 DENND4BO75064 1496 aaPredicted RBP30.33■■■□□ 2.45
TRIM3-214ENST00000536344 TTC37Q6PGP7 1564 aa30.32■■■□□ 2.44
TRIM3-214ENST00000536344 ROCK1Q13464 1354 aa30.31■■■□□ 2.44
TRIM3-214ENST00000536344 NCOA1Q15788 1441 aa30.31■■■□□ 2.44
TRIM3-214ENST00000536344 TONSLQ96HA7 1378 aa30.3■■■□□ 2.44
TRIM3-214ENST00000536344 TSPY4P0CV99 314 aa30.29■■■□□ 2.44
TRIM3-214ENST00000536344 TSPY10P0CW01 314 aa30.29■■■□□ 2.44
TRIM3-214ENST00000536344 SLC4A1APQ9BWU0 796 aaKnown RBP30.28■■■□□ 2.44
TRIM3-214ENST00000536344 ZCCHC11Q5TAX3 1644 aaKnown RBP30.28■■■□□ 2.44
TRIM3-214ENST00000536344 CDC42BPBQ9Y5S2 1711 aa30.27■■■□□ 2.44
TRIM3-214ENST00000536344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.27■■■□□ 2.44
TRIM3-214ENST00000536344 ARHGAP5Q13017 1502 aa30.25■■■□□ 2.43
TRIM3-214ENST00000536344 PPP1R15AO75807 674 aaPredicted RBP30.24■■■□□ 2.43
TRIM3-214ENST00000536344 C9orf84Q5VXU9 1444 aa30.23■■■□□ 2.43
TRIM3-214ENST00000536344 FKBP8Q14318 412 aa30.23■■■□□ 2.43
TRIM3-214ENST00000536344 ANKRD30AQ9BXX3 1397 aa30.22■■■□□ 2.43
TRIM3-214ENST00000536344 SAMD9LQ8IVG5 1584 aa30.21■■■□□ 2.43
TRIM3-214ENST00000536344 RBM19Q9Y4C8 960 aaKnown RBP30.2■■■□□ 2.43
TRIM3-214ENST00000536344 CROCC2H7BZ55 1655 aa30.18■■■□□ 2.42
TRIM3-214ENST00000536344 KDM5BQ9UGL1 1544 aa30.18■■■□□ 2.42
TRIM3-214ENST00000536344 PREX2Q70Z35 1606 aa30.17■■■□□ 2.42
TRIM3-214ENST00000536344 MBD5Q9P267 1494 aa30.16■■■□□ 2.42
TRIM3-214ENST00000536344 SYCP2Q9BX26 1530 aa30.16■■■□□ 2.42
TRIM3-214ENST00000536344 ANKRD50Q9ULJ7 1429 aa30.15■■■□□ 2.42
TRIM3-214ENST00000536344 ADGBQ8N7X0 1667 aa30.15■■■□□ 2.42
TRIM3-214ENST00000536344 UHRF1BP1LA0JNW5 1464 aa30.14■■■□□ 2.41
TRIM3-214ENST00000536344 KIF15Q9NS87 1388 aa30.11■■■□□ 2.41
TRIM3-214ENST00000536344 ADGRL2O95490 1459 aa30.1■■■□□ 2.41
TRIM3-214ENST00000536344 TIMELESSQ9UNS1 1208 aa30.09■■■□□ 2.41
TRIM3-214ENST00000536344 PKD2Q13563 968 aa30.09■■■□□ 2.41
TRIM3-214ENST00000536344 MYO5CQ9NQX4 1742 aa30.08■■■□□ 2.41
TRIM3-214ENST00000536344 CCDC141Q6ZP82 1450 aa30.07■■■□□ 2.4
TRIM3-214ENST00000536344 NUP155O75694 1391 aa30.06■■■□□ 2.4
TRIM3-214ENST00000536344 PZPP20742 1482 aa30.06■■■□□ 2.4
TRIM3-214ENST00000536344 L3MBTL2Q969R5 705 aa30.06■■■□□ 2.4
TRIM3-214ENST00000536344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.05■■■□□ 2.4
TRIM3-214ENST00000536344 MSH5O43196 834 aa30.04■■■□□ 2.4
TRIM3-214ENST00000536344 ARHGEF12Q9NZN5 1544 aa30.04■■■□□ 2.4
TRIM3-214ENST00000536344 EFCAB2Q5VUJ9 269 aa30.04■■■□□ 2.4
TRIM3-214ENST00000536344 ANKRD30BQ9BXX2 1392 aa30.03■■■□□ 2.4
TRIM3-214ENST00000536344 PLCH2O75038 1416 aa30.01■■■□□ 2.4
TRIM3-214ENST00000536344 AFAP1Q8N556 730 aa30.01■■■□□ 2.39
TRIM3-214ENST00000536344 SHANK2Q9UPX8 1470 aa30■■■□□ 2.39
TRIM3-214ENST00000536344 ARHGEF5Q12774 1597 aa29.99■■■□□ 2.39
TRIM3-214ENST00000536344 NPM1P06748 294 aaKnown RBP eCLIP29.98■■■□□ 2.39
TRIM3-214ENST00000536344 WDR7Q9Y4E6 1490 aa29.98■■■□□ 2.39
TRIM3-214ENST00000536344 ASXL2Q76L83 1435 aa29.97■■■□□ 2.39
TRIM3-214ENST00000536344 DDX10Q13206 875 aaKnown RBP29.97■■■□□ 2.39
TRIM3-214ENST00000536344 TRAPPC8Q9Y2L5 1435 aa29.95■■■□□ 2.38
TRIM3-214ENST00000536344 MYT1LQ9UL68 1186 aa29.95■■■□□ 2.38
TRIM3-214ENST00000536344 RSPH4AQ5TD94 716 aa29.93■■■□□ 2.38
TRIM3-214ENST00000536344 ZNF326Q5BKZ1 582 aaKnown RBP29.92■■■□□ 2.38
TRIM3-214ENST00000536344 CYB5RLQ6IPT4 315 aa29.91■■■□□ 2.38
TRIM3-214ENST00000536344 NBPF8Q3BBV2 869 aa29.87■■■□□ 2.37
TRIM3-214ENST00000536344 KIAA1107Q9UPP5 1409 aa29.87■■■□□ 2.37
TRIM3-214ENST00000536344 RPRD2Q5VT52 1461 aaKnown RBP29.86■■■□□ 2.37
TRIM3-214ENST00000536344 PLEKHH2Q8IVE3 1493 aa29.86■■■□□ 2.37
TRIM3-214ENST00000536344 PRKCSHP14314 528 aaPredicted RBP29.85■■■□□ 2.37
TRIM3-214ENST00000536344 FANCAO15360 1455 aa29.82■■■□□ 2.36
TRIM3-214ENST00000536344 SPAG9O60271 1321 aaKnown RBP29.82■■■□□ 2.36
TRIM3-214ENST00000536344 ABCC1P33527 1531 aa29.82■■■□□ 2.36
TRIM3-214ENST00000536344 HSPA5P11021 654 aaKnown RBP29.77■■■□□ 2.36
TRIM3-214ENST00000536344 KDM2AQ9Y2K7 1162 aa29.77■■■□□ 2.36
TRIM3-214ENST00000536344 NEFLP07196 543 aa29.76■■■□□ 2.36
TRIM3-214ENST00000536344 TEX14Q8IWB6 1497 aa29.76■■■□□ 2.35
TRIM3-214ENST00000536344 SCAPERQ9BY12 1400 aa29.74■■■□□ 2.35
TRIM3-214ENST00000536344 FAM135AQ9P2D6 1515 aa29.73■■■□□ 2.35
TRIM3-214ENST00000536344 ABCA9Q8IUA7 1624 aa29.71■■■□□ 2.35
TRIM3-214ENST00000536344 ADGRL1O94910 1474 aa29.71■■■□□ 2.35
TRIM3-214ENST00000536344 MAST1Q9Y2H9 1570 aa29.71■■■□□ 2.35
TRIM3-214ENST00000536344 RGL3Q3MIN7 710 aa29.7■■■□□ 2.35
TRIM3-214ENST00000536344 EIF4G2P78344 907 aaKnown RBP eCLIP29.66■■■□□ 2.34
TRIM3-214ENST00000536344 PLXNC1O60486 1568 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms