RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 RPRD2Q5VT52 1461 aaKnown RBP9.42□□□□□ -0.9
CPSF7-215ENST00000536145 MTUS2Q5JR59 1369 aa9.42□□□□□ -0.9
CPSF7-215ENST00000536145 WASHC2CQ9Y4E1 1318 aa9.42□□□□□ -0.9
CPSF7-215ENST00000536145 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-215ENST00000536145 ANKRD30BQ9BXX2 1392 aa9.41□□□□□ -0.9
CPSF7-215ENST00000536145 KIF7Q2M1P5 1343 aa9.41□□□□□ -0.9
CPSF7-215ENST00000536145 NBPF8Q3BBV2 869 aa9.41□□□□□ -0.9
CPSF7-215ENST00000536145 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
CPSF7-215ENST00000536145 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
CPSF7-215ENST00000536145 MBD5Q9P267 1494 aa9.4□□□□□ -0.9
CPSF7-215ENST00000536145 NBR1Q14596 966 aa9.4□□□□□ -0.9
CPSF7-215ENST00000536145 FAM9BQ8IZU0 186 aa9.4□□□□□ -0.9
CPSF7-215ENST00000536145 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
CPSF7-215ENST00000536145 ANP32AP39687 249 aaKnown RBP9.38□□□□□ -0.91
CPSF7-215ENST00000536145 MPHOSPH9Q99550 1183 aa9.38□□□□□ -0.91
CPSF7-215ENST00000536145 ZBTB47Q9UFB7 747 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-215ENST00000536145 RAD54L2Q9Y4B4 1467 aa9.38□□□□□ -0.91
CPSF7-215ENST00000536145 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
CPSF7-215ENST00000536145 TOPBP1Q92547 1522 aa9.37□□□□□ -0.91
CPSF7-215ENST00000536145 BCORL1Q5H9F3 1711 aa9.37□□□□□ -0.91
CPSF7-215ENST00000536145 POLA1P09884 1462 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-215ENST00000536145 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-215ENST00000536145 ROCK1Q13464 1354 aa9.37□□□□□ -0.91
CPSF7-215ENST00000536145 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
CPSF7-215ENST00000536145 FANCD2Q9BXW9 1451 aa9.35□□□□□ -0.91
CPSF7-215ENST00000536145 TCERG1O14776 1098 aaKnown RBP9.35□□□□□ -0.91
CPSF7-215ENST00000536145 IL27Q8NEV9 243 aa9.35□□□□□ -0.91
CPSF7-215ENST00000536145 CCDC136Q96JN2 1154 aa9.35□□□□□ -0.91
CPSF7-215ENST00000536145 ATP1B4Q9UN42 357 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-215ENST00000536145 NESP48681 1621 aa9.34□□□□□ -0.91
CPSF7-215ENST00000536145 ARID4BQ4LE39 1312 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-215ENST00000536145 MS4A1P11836 297 aa9.34□□□□□ -0.91
CPSF7-215ENST00000536145 RTL5Q5HYW3 569 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-215ENST00000536145 PNISRQ8TF01 805 aaKnown RBP9.34□□□□□ -0.91
CPSF7-215ENST00000536145 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
CPSF7-215ENST00000536145 KDM5CP41229 1560 aa9.33□□□□□ -0.92
CPSF7-215ENST00000536145 PZPP20742 1482 aa9.32□□□□□ -0.92
CPSF7-215ENST00000536145 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
CPSF7-215ENST00000536145 DNMT1P26358 1616 aaKnown RBP9.31□□□□□ -0.92
CPSF7-215ENST00000536145 BACH2Q9BYV9 841 aa9.31□□□□□ -0.92
CPSF7-215ENST00000536145 SENP3Q9H4L4 574 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-215ENST00000536145 KIF14Q15058 1648 aa9.31□□□□□ -0.92
CPSF7-215ENST00000536145 DAPK1P53355 1430 aa9.31□□□□□ -0.92
CPSF7-215ENST00000536145 UHRF1BP1Q6BDS2 1440 aa9.31□□□□□ -0.92
CPSF7-215ENST00000536145 E9PCH4 1651 aa9.3□□□□□ -0.92
CPSF7-215ENST00000536145 PDE4AP27815 886 aa9.3□□□□□ -0.92
CPSF7-215ENST00000536145 RRP1P56182 461 aaKnown RBP9.3□□□□□ -0.92
CPSF7-215ENST00000536145 ABCC5O15440 1437 aa9.3□□□□□ -0.92
CPSF7-215ENST00000536145 INSRP06213 1382 aa9.29□□□□□ -0.92
CPSF7-215ENST00000536145 PPM1GO15355 546 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-215ENST00000536145 WDR62O43379 1518 aa9.29□□□□□ -0.92
CPSF7-215ENST00000536145 EPRSP07814 1512 aaKnown RBP9.29□□□□□ -0.92
CPSF7-215ENST00000536145 BRD4O60885 1362 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-215ENST00000536145 ROCK2O75116 1388 aaKnown RBP9.28□□□□□ -0.92
CPSF7-215ENST00000536145 KTN1Q86UP2 1357 aaKnown RBP9.28□□□□□ -0.92
CPSF7-215ENST00000536145 LAMC3Q9Y6N6 1575 aa9.28□□□□□ -0.92
CPSF7-215ENST00000536145 RALGAPBQ86X10 1494 aa9.28□□□□□ -0.92
CPSF7-215ENST00000536145 FOXD1Q16676 465 aa9.27□□□□□ -0.93
CPSF7-215ENST00000536145 EXOC6Q8TAG9 804 aa9.27□□□□□ -0.93
CPSF7-215ENST00000536145 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
CPSF7-215ENST00000536145 ZMYM4Q5VZL5 1548 aa9.26□□□□□ -0.93
CPSF7-215ENST00000536145 USP47Q96K76 1375 aa9.26□□□□□ -0.93
CPSF7-215ENST00000536145 GAPVD1Q14C86 1478 aa9.26□□□□□ -0.93
CPSF7-215ENST00000536145 KIF15Q9NS87 1388 aa9.25□□□□□ -0.93
CPSF7-215ENST00000536145 KIAA1107Q9UPP5 1409 aa9.25□□□□□ -0.93
CPSF7-215ENST00000536145 NEFMP07197 916 aa9.25□□□□□ -0.93
CPSF7-215ENST00000536145 UBE2Q2Q8WVN8 375 aa9.25□□□□□ -0.93
CPSF7-215ENST00000536145 ADGRL2O95490 1459 aa9.25□□□□□ -0.93
CPSF7-215ENST00000536145 URB2Q14146 1524 aaKnown RBP9.25□□□□□ -0.93
CPSF7-215ENST00000536145 PDE3BQ13370 1112 aa9.24□□□□□ -0.93
CPSF7-215ENST00000536145 CDK13Q14004 1512 aaKnown RBP9.24□□□□□ -0.93
CPSF7-215ENST00000536145 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
CPSF7-215ENST00000536145 RCAN3Q9UKA8 241 aa9.23□□□□□ -0.93
CPSF7-215ENST00000536145 LAS1LQ9Y4W2 734 aaKnown RBP9.23□□□□□ -0.93
CPSF7-215ENST00000536145 MYBBP1AQ9BQG0 1328 aaKnown RBP9.23□□□□□ -0.93
CPSF7-215ENST00000536145 ERCC6Q03468 1493 aa9.22□□□□□ -0.93
CPSF7-215ENST00000536145 RALBP1Q15311 655 aa9.22□□□□□ -0.93
CPSF7-215ENST00000536145 DDRGK1Q96HY6 314 aa9.22□□□□□ -0.93
CPSF7-215ENST00000536145 BLMP54132 1417 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-215ENST00000536145 ADGBQ8N7X0 1667 aa9.21□□□□□ -0.93
CPSF7-215ENST00000536145 PARD3Q8TEW0 1356 aa9.21□□□□□ -0.94
CPSF7-215ENST00000536145 GSE1Q14687 1217 aa9.2□□□□□ -0.94
CPSF7-215ENST00000536145 RTN4Q9NQC3 1192 aaKnown RBP9.2□□□□□ -0.94
CPSF7-215ENST00000536145 BRPF3Q9ULD4 1205 aa9.2□□□□□ -0.94
CPSF7-215ENST00000536145 KDM2BQ8NHM5 1336 aa9.2□□□□□ -0.94
CPSF7-215ENST00000536145 KDM5DQ9BY66 1539 aa9.2□□□□□ -0.94
CPSF7-215ENST00000536145 CROCC2H7BZ55 1655 aa9.2□□□□□ -0.94
CPSF7-215ENST00000536145 NFKBIBQ15653 356 aa9.19□□□□□ -0.94
CPSF7-215ENST00000536145 NPM2Q86SE8 214 aaKnown RBP9.19□□□□□ -0.94
CPSF7-215ENST00000536145 TMC1Q8TDI8 760 aa9.19□□□□□ -0.94
CPSF7-215ENST00000536145 SLC4A1APQ9BWU0 796 aaKnown RBP9.19□□□□□ -0.94
CPSF7-215ENST00000536145 ZNF608Q9ULD9 1512 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-215ENST00000536145 IQGAP2Q13576 1575 aa9.19□□□□□ -0.94
CPSF7-215ENST00000536145 TARBP1Q13395 1621 aaKnown RBP9.18□□□□□ -0.94
CPSF7-215ENST00000536145 CEP170Q5SW79 1584 aa9.18□□□□□ -0.94
CPSF7-215ENST00000536145 TDRD9Q8NDG6 1382 aaKnown RBP9.18□□□□□ -0.94
CPSF7-215ENST00000536145 PLEKHH2Q8IVE3 1493 aa9.17□□□□□ -0.94
CPSF7-215ENST00000536145 FRAT1Q92837 279 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-215ENST00000536145 CRBNQ96SW2 442 aa9.16□□□□□ -0.94
CPSF7-215ENST00000536145 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms