RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 ABCC5O15440 1437 aa25.98■■□□□ 1.75
CHPF-203ENST00000535926 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
CHPF-203ENST00000535926 ROCK1Q13464 1354 aa25.97■■□□□ 1.75
CHPF-203ENST00000535926 DISP1Q96F81 1524 aa25.95■■□□□ 1.75
CHPF-203ENST00000535926 RBM19Q9Y4C8 960 aaKnown RBP25.94■■□□□ 1.74
CHPF-203ENST00000535926 CNTLNQ9NXG0 1405 aa25.94■■□□□ 1.74
CHPF-203ENST00000535926 NUP153P49790 1475 aaKnown RBP25.93■■□□□ 1.74
CHPF-203ENST00000535926 RPRD2Q5VT52 1461 aaKnown RBP25.93■■□□□ 1.74
CHPF-203ENST00000535926 CCDC7Q96M83 1385 aa25.92■■□□□ 1.74
CHPF-203ENST00000535926 NCOA1Q15788 1441 aa25.92■■□□□ 1.74
CHPF-203ENST00000535926 ANP32EQ9BTT0 268 aa25.92■■□□□ 1.74
CHPF-203ENST00000535926 KIAA0586Q9BVV6 1533 aa25.92■■□□□ 1.74
CHPF-203ENST00000535926 SLC4A1APQ9BWU0 796 aaKnown RBP25.91■■□□□ 1.74
CHPF-203ENST00000535926 IRX6P78412 446 aaPredicted RBP25.9■■□□□ 1.74
CHPF-203ENST00000535926 PRKRIP1Q9H875 184 aaPredicted RBP25.9■■□□□ 1.74
CHPF-203ENST00000535926 KIAA0556O60303 1618 aa25.88■■□□□ 1.73
CHPF-203ENST00000535926 TEX14Q8IWB6 1497 aa25.88■■□□□ 1.73
CHPF-203ENST00000535926 DNMT1P26358 1616 aaKnown RBP25.87■■□□□ 1.73
CHPF-203ENST00000535926 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
CHPF-203ENST00000535926 CDK11AQ9UQ88 783 aaPredicted RBP25.85■■□□□ 1.73
CHPF-203ENST00000535926 SPATA31E1Q6ZUB1 1445 aa25.84■■□□□ 1.73
CHPF-203ENST00000535926 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
CHPF-203ENST00000535926 KIF7Q2M1P5 1343 aa25.82■■□□□ 1.72
CHPF-203ENST00000535926 FAM9BQ8IZU0 186 aa25.82■■□□□ 1.72
CHPF-203ENST00000535926 RAPGEF6Q8TEU7 1601 aa25.8■■□□□ 1.72
CHPF-203ENST00000535926 CFDP1Q9UEE9 299 aaPredicted RBP25.79■■□□□ 1.72
CHPF-203ENST00000535926 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
CHPF-203ENST00000535926 MRS2Q9HD23 443 aa25.78■■□□□ 1.72
CHPF-203ENST00000535926 PZPP20742 1482 aa25.77■■□□□ 1.72
CHPF-203ENST00000535926 TROQ12816 1431 aaPredicted RBP25.75■■□□□ 1.71
CHPF-203ENST00000535926 ZNF777Q9ULD5 760 aaPredicted RBP25.74■■□□□ 1.71
CHPF-203ENST00000535926 CAMSAP2Q08AD1 1489 aa25.73■■□□□ 1.71
CHPF-203ENST00000535926 PLB1Q6P1J6 1458 aa25.73■■□□□ 1.71
CHPF-203ENST00000535926 GPATCH8Q9UKJ3 1502 aaKnown RBP25.72■■□□□ 1.71
CHPF-203ENST00000535926 ZBED9Q6R2W3 1325 aa25.68■■□□□ 1.7
CHPF-203ENST00000535926 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
CHPF-203ENST00000535926 EIF4G3O43432 1585 aaKnown RBP25.67■■□□□ 1.7
CHPF-203ENST00000535926 PKD2Q13563 968 aa25.67■■□□□ 1.7
CHPF-203ENST00000535926 KIAA1107Q9UPP5 1409 aa25.65■■□□□ 1.7
CHPF-203ENST00000535926 ZNF326Q5BKZ1 582 aaKnown RBP25.65■■□□□ 1.7
CHPF-203ENST00000535926 ERICH6BQ5W0A0 696 aa25.64■■□□□ 1.7
CHPF-203ENST00000535926 KIF14Q15058 1648 aa25.64■■□□□ 1.69
CHPF-203ENST00000535926 MBD5Q9P267 1494 aa25.64■■□□□ 1.69
CHPF-203ENST00000535926 FBLN2P98095 1184 aa25.63■■□□□ 1.69
CHPF-203ENST00000535926 PPP4R2Q9NY27 417 aa25.62■■□□□ 1.69
CHPF-203ENST00000535926 ADGRL2O95490 1459 aa25.62■■□□□ 1.69
CHPF-203ENST00000535926 DHX29Q7Z478 1369 aaKnown RBP25.61■■□□□ 1.69
CHPF-203ENST00000535926 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
CHPF-203ENST00000535926 MSH5O43196 834 aa25.61■■□□□ 1.69
CHPF-203ENST00000535926 CNGB1Q14028 1251 aaPredicted RBP25.61■■□□□ 1.69
CHPF-203ENST00000535926 JPH4Q96JJ6 628 aa25.6■■□□□ 1.69
CHPF-203ENST00000535926 USP47Q96K76 1375 aa25.6■■□□□ 1.69
CHPF-203ENST00000535926 ANKRD30AQ9BXX3 1397 aa25.59■■□□□ 1.69
CHPF-203ENST00000535926 POLR3GLQ9BT43 218 aa25.58■■□□□ 1.69
CHPF-203ENST00000535926 ANKRD50Q9ULJ7 1429 aa25.57■■□□□ 1.68
CHPF-203ENST00000535926 MAGI1Q96QZ7 1491 aaPredicted RBP25.57■■□□□ 1.68
CHPF-203ENST00000535926 POLR1AO95602 1720 aaPredicted RBP25.56■■□□□ 1.68
CHPF-203ENST00000535926 ITSN2Q9NZM3 1697 aa25.56■■□□□ 1.68
CHPF-203ENST00000535926 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
CHPF-203ENST00000535926 ADGBQ8N7X0 1667 aa25.55■■□□□ 1.68
CHPF-203ENST00000535926 BCORL1Q5H9F3 1711 aa25.55■■□□□ 1.68
CHPF-203ENST00000535926 ADCY10Q96PN6 1610 aa25.53■■□□□ 1.68
CHPF-203ENST00000535926 B4GALNT3Q6L9W6 998 aa25.53■■□□□ 1.68
CHPF-203ENST00000535926 PLEKHD1A6NEE1 506 aa25.52■■□□□ 1.68
CHPF-203ENST00000535926 CARMIL2Q6F5E8 1435 aa25.52■■□□□ 1.68
CHPF-203ENST00000535926 NUP155O75694 1391 aa25.51■■□□□ 1.68
CHPF-203ENST00000535926 CROCC2H7BZ55 1655 aa25.5■■□□□ 1.67
CHPF-203ENST00000535926 FANCIQ9NVI1 1328 aa25.49■■□□□ 1.67
CHPF-203ENST00000535926 NUP160Q12769 1436 aa25.48■■□□□ 1.67
CHPF-203ENST00000535926 KDM5CP41229 1560 aa25.47■■□□□ 1.67
CHPF-203ENST00000535926 ATP10BO94823 1461 aa25.46■■□□□ 1.67
CHPF-203ENST00000535926 ABCC10Q5T3U5 1492 aa25.46■■□□□ 1.67
CHPF-203ENST00000535926 ARID4BQ4LE39 1312 aaPredicted RBP25.46■■□□□ 1.67
CHPF-203ENST00000535926 C9orf84Q5VXU9 1444 aa25.46■■□□□ 1.67
CHPF-203ENST00000535926 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
CHPF-203ENST00000535926 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
CHPF-203ENST00000535926 CARD11Q9BXL7 1154 aa25.45■■□□□ 1.66
CHPF-203ENST00000535926 SENP3-EIF4A1A0A087X0R7 540 aa25.44■■□□□ 1.66
CHPF-203ENST00000535926 KDM2AQ9Y2K7 1162 aa25.44■■□□□ 1.66
CHPF-203ENST00000535926 HNRNPMP52272 730 aaKnown RBP eCLIP25.43■■□□□ 1.66
CHPF-203ENST00000535926 TSPY4P0CV99 314 aa25.42■■□□□ 1.66
CHPF-203ENST00000535926 TSPY10P0CW01 314 aa25.42■■□□□ 1.66
CHPF-203ENST00000535926 SMG6Q86US8 1419 aaKnown RBP25.42■■□□□ 1.66
CHPF-203ENST00000535926 PNISRQ8TF01 805 aaKnown RBP25.41■■□□□ 1.66
CHPF-203ENST00000535926 RALGAPBQ86X10 1494 aa25.41■■□□□ 1.66
CHPF-203ENST00000535926 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
CHPF-203ENST00000535926 ABCA8O94911 1581 aa25.4■■□□□ 1.66
CHPF-203ENST00000535926 ST20-MTHFSA0A0A6YYL1 179 aa25.39■■□□□ 1.66
CHPF-203ENST00000535926 SHANK2Q9UPX8 1470 aa25.39■■□□□ 1.66
CHPF-203ENST00000535926 NUDCQ9Y266 331 aa25.38■■□□□ 1.65
CHPF-203ENST00000535926 DCAF11Q8TEB1 546 aa25.38■■□□□ 1.65
CHPF-203ENST00000535926 KIF15Q9NS87 1388 aa25.36■■□□□ 1.65
CHPF-203ENST00000535926 ROCK2O75116 1388 aaKnown RBP25.35■■□□□ 1.65
CHPF-203ENST00000535926 TMC1Q8TDI8 760 aa25.34■■□□□ 1.65
CHPF-203ENST00000535926 RNF123Q5XPI4 1314 aa25.33■■□□□ 1.65
CHPF-203ENST00000535926 KDM5DQ9BY66 1539 aa25.33■■□□□ 1.65
CHPF-203ENST00000535926 ARHGEF12Q9NZN5 1544 aa25.33■■□□□ 1.65
CHPF-203ENST00000535926 PTPRGP23470 1445 aa25.33■■□□□ 1.65
CHPF-203ENST00000535926 LRPPRCP42704 1394 aaKnown RBP25.24■■□□□ 1.63
CHPF-203ENST00000535926 ARHGEF5Q12774 1597 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms