RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 PTMSP20962 102 aa12.1□□□□□ -0.47
TNC-210ENST00000535648 DRC7Q8IY82 874 aa12.1□□□□□ -0.47
TNC-210ENST00000535648 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
TNC-210ENST00000535648 SRPK2P78362 688 aaKnown RBP12.09□□□□□ -0.47
TNC-210ENST00000535648 MORC1Q86VD1 984 aa12.09□□□□□ -0.47
TNC-210ENST00000535648 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
TNC-210ENST00000535648 RTF1Q92541 710 aaKnown RBP12.09□□□□□ -0.47
TNC-210ENST00000535648 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
TNC-210ENST00000535648 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
TNC-210ENST00000535648 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
TNC-210ENST00000535648 FANCIQ9NVI1 1328 aa12.07□□□□□ -0.48
TNC-210ENST00000535648 GNL2Q13823 731 aaKnown RBP12.07□□□□□ -0.48
TNC-210ENST00000535648 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
TNC-210ENST00000535648 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
TNC-210ENST00000535648 KIAA1211Q6ZU35 1233 aa12.05□□□□□ -0.48
TNC-210ENST00000535648 CALD1Q05682 793 aaKnown RBP12.05□□□□□ -0.48
TNC-210ENST00000535648 CLSTN1O94985 981 aa12.05□□□□□ -0.48
TNC-210ENST00000535648 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
TNC-210ENST00000535648 HDGFL2Q7Z4V5 671 aaPredicted RBP12.04□□□□□ -0.48
TNC-210ENST00000535648 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
TNC-210ENST00000535648 KIAA2012Q0VF49 1180 aa12.03□□□□□ -0.48
TNC-210ENST00000535648 GBP4Q96PP9 640 aa12.03□□□□□ -0.48
TNC-210ENST00000535648 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
TNC-210ENST00000535648 SOX12O15370 315 aa12.02□□□□□ -0.49
TNC-210ENST00000535648 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
TNC-210ENST00000535648 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
TNC-210ENST00000535648 HTATSF1O43719 755 aaKnown RBP12.01□□□□□ -0.49
TNC-210ENST00000535648 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
TNC-210ENST00000535648 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
TNC-210ENST00000535648 CUX2O14529 1486 aa12□□□□□ -0.49
TNC-210ENST00000535648 ROCK2O75116 1388 aaKnown RBP11.99□□□□□ -0.49
TNC-210ENST00000535648 RWDD1Q9H446 243 aaPredicted RBP11.99□□□□□ -0.49
TNC-210ENST00000535648 SYAP1Q96A49 352 aaPredicted RBP11.99□□□□□ -0.49
TNC-210ENST00000535648 HSPA5P11021 654 aaKnown RBP11.99□□□□□ -0.49
TNC-210ENST00000535648 EIF3AQ14152 1382 aaKnown RBP11.99□□□□□ -0.49
TNC-210ENST00000535648 CHMP4AQ9BY43 222 aa11.99□□□□□ -0.49
TNC-210ENST00000535648 RALBP1Q15311 655 aa11.98□□□□□ -0.49
TNC-210ENST00000535648 SAFB2Q14151 953 aaKnown RBP eCLIP11.98□□□□□ -0.49
TNC-210ENST00000535648 IPO9Q96P70 1041 aaKnown RBP11.98□□□□□ -0.49
TNC-210ENST00000535648 TPM4P67936 248 aa11.97□□□□□ -0.49
TNC-210ENST00000535648 GPATCH3Q96I76 525 aa11.97□□□□□ -0.49
TNC-210ENST00000535648 MLECQ14165 292 aa11.97□□□□□ -0.49
TNC-210ENST00000535648 ITPRIPQ8IWB1 547 aa11.97□□□□□ -0.49
TNC-210ENST00000535648 RCAN3Q9UKA8 241 aa11.97□□□□□ -0.49
TNC-210ENST00000535648 PMFBP1Q8TBY8 1022 aa11.97□□□□□ -0.49
TNC-210ENST00000535648 APBB1O00213 710 aa11.96□□□□□ -0.5
TNC-210ENST00000535648 STK26Q9P289 416 aa11.96□□□□□ -0.5
TNC-210ENST00000535648 TCERG1O14776 1098 aaKnown RBP11.95□□□□□ -0.5
TNC-210ENST00000535648 SPAG9O60271 1321 aaKnown RBP11.95□□□□□ -0.5
TNC-210ENST00000535648 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
TNC-210ENST00000535648 PKD2Q13563 968 aa11.94□□□□□ -0.5
TNC-210ENST00000535648 NOC3LQ8WTT2 800 aaKnown RBP11.94□□□□□ -0.5
TNC-210ENST00000535648 U2AF1L5P0DN76 240 aaPredicted RBP11.94□□□□□ -0.5
TNC-210ENST00000535648 U2AF1Q01081 240 aaKnown RBP eCLIP11.94□□□□□ -0.5
TNC-210ENST00000535648 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
TNC-210ENST00000535648 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
TNC-210ENST00000535648 CCDC34Q96HJ3 373 aa11.93□□□□□ -0.5
TNC-210ENST00000535648 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
TNC-210ENST00000535648 HDAC5Q9UQL6 1122 aa11.93□□□□□ -0.5
TNC-210ENST00000535648 TMX4Q9H1E5 349 aaPredicted RBP11.92□□□□□ -0.5
TNC-210ENST00000535648 GGT6Q6P531 493 aa11.92□□□□□ -0.5
TNC-210ENST00000535648 STK31Q9BXU1 1019 aa11.92□□□□□ -0.5
TNC-210ENST00000535648 CSB-PGBD3P0DP91 1061 aa11.91□□□□□ -0.5
TNC-210ENST00000535648 HMMRO75330 724 aa11.9□□□□□ -0.5
TNC-210ENST00000535648 GORABQ5T7V8 394 aa11.9□□□□□ -0.5
TNC-210ENST00000535648 ANKRD30AQ9BXX3 1397 aa11.9□□□□□ -0.5
TNC-210ENST00000535648 FMN1Q68DA7 1419 aa11.9□□□□□ -0.5
TNC-210ENST00000535648 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.51
TNC-210ENST00000535648 GZF1Q9H116 711 aaPredicted RBP11.89□□□□□ -0.51
TNC-210ENST00000535648 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
TNC-210ENST00000535648 SMC4Q9NTJ3 1288 aa11.89□□□□□ -0.51
TNC-210ENST00000535648 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
TNC-210ENST00000535648 SOGA1O94964 1423 aa11.88□□□□□ -0.51
TNC-210ENST00000535648 MPHOSPH9Q99550 1183 aa11.88□□□□□ -0.51
TNC-210ENST00000535648 NUP155O75694 1391 aa11.88□□□□□ -0.51
TNC-210ENST00000535648 SLKQ9H2G2 1235 aaPredicted RBP11.88□□□□□ -0.51
TNC-210ENST00000535648 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
TNC-210ENST00000535648 CCDC9Q9Y3X0 531 aaKnown RBP11.88□□□□□ -0.51
TNC-210ENST00000535648 PHF14O94880 888 aa11.87□□□□□ -0.51
TNC-210ENST00000535648 TERF2IPQ9NYB0 399 aa11.87□□□□□ -0.51
TNC-210ENST00000535648 GOLGA6L3A6NEY3 463 aa11.87□□□□□ -0.51
TNC-210ENST00000535648 MFAP1P55081 439 aaKnown RBP11.87□□□□□ -0.51
TNC-210ENST00000535648 CHMP3Q9Y3E7 222 aa11.87□□□□□ -0.51
TNC-210ENST00000535648 FOXD1Q16676 465 aa11.87□□□□□ -0.51
TNC-210ENST00000535648 LMOD3Q0VAK6 560 aa11.87□□□□□ -0.51
TNC-210ENST00000535648 RAB3GAP2Q9H2M9 1393 aa11.87□□□□□ -0.51
TNC-210ENST00000535648 GOLGA6L1Q8N7Z2 621 aa11.86□□□□□ -0.51
TNC-210ENST00000535648 PHLDB1Q86UU1 1377 aa11.86□□□□□ -0.51
TNC-210ENST00000535648 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
TNC-210ENST00000535648 SMARCA2P51531 1590 aa11.85□□□□□ -0.51
TNC-210ENST00000535648 ABCC8Q09428 1581 aa11.85□□□□□ -0.51
TNC-210ENST00000535648 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
TNC-210ENST00000535648 PRM3Q9NNZ6 103 aa11.84□□□□□ -0.51
TNC-210ENST00000535648 HSP90AA2PQ14568 343 aaPredicted RBP11.84□□□□□ -0.51
TNC-210ENST00000535648 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
TNC-210ENST00000535648 ST18O60284 1047 aa11.83□□□□□ -0.52
TNC-210ENST00000535648 EFCAB2Q5VUJ9 269 aa11.83□□□□□ -0.52
TNC-210ENST00000535648 PDE3BQ13370 1112 aa11.83□□□□□ -0.52
TNC-210ENST00000535648 KIF3AQ9Y496 699 aa11.83□□□□□ -0.52
TNC-210ENST00000535648 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms