RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 KCNH8Q96L42 1107 aa27.6■■■□□ 2.01
CLPB-205ENST00000535477 DNMT1P26358 1616 aaKnown RBP27.6■■■□□ 2.01
CLPB-205ENST00000535477 ZCCHC11Q5TAX3 1644 aaKnown RBP27.59■■■□□ 2.01
CLPB-205ENST00000535477 MAPKBP1O60336 1514 aa27.57■■■□□ 2
CLPB-205ENST00000535477 KDM5BQ9UGL1 1544 aa27.57■■■□□ 2
CLPB-205ENST00000535477 AKNAQ7Z591 1439 aa27.52■■■□□ 2
CLPB-205ENST00000535477 GCC2Q8IWJ2 1684 aa27.51■■□□□ 1.99
CLPB-205ENST00000535477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.5■■□□□ 1.99
CLPB-205ENST00000535477 ROCK1Q13464 1354 aa27.49■■□□□ 1.99
CLPB-205ENST00000535477 TTC37Q6PGP7 1564 aa27.49■■□□□ 1.99
CLPB-205ENST00000535477 KDM6BO15054 1643 aa27.47■■□□□ 1.99
CLPB-205ENST00000535477 HNRNPMP52272 730 aaKnown RBP eCLIP27.46■■□□□ 1.99
CLPB-205ENST00000535477 TRIM52Q96A61 297 aa27.46■■□□□ 1.99
CLPB-205ENST00000535477 CDC42BPBQ9Y5S2 1711 aa27.45■■□□□ 1.99
CLPB-205ENST00000535477 PREX2Q70Z35 1606 aa27.45■■□□□ 1.98
CLPB-205ENST00000535477 SIN3AQ96ST3 1273 aa27.45■■□□□ 1.98
CLPB-205ENST00000535477 NEUROD1Q13562 356 aa27.43■■□□□ 1.98
CLPB-205ENST00000535477 ARHGAP5Q13017 1502 aa27.42■■□□□ 1.98
CLPB-205ENST00000535477 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.98
CLPB-205ENST00000535477 CROCC2H7BZ55 1655 aa27.39■■□□□ 1.98
CLPB-205ENST00000535477 NCOA1Q15788 1441 aa27.39■■□□□ 1.98
CLPB-205ENST00000535477 TSPY4P0CV99 314 aa27.38■■□□□ 1.97
CLPB-205ENST00000535477 TSPY10P0CW01 314 aa27.38■■□□□ 1.97
CLPB-205ENST00000535477 MYO5CQ9NQX4 1742 aa27.37■■□□□ 1.97
CLPB-205ENST00000535477 ANKRD30AQ9BXX3 1397 aa27.35■■□□□ 1.97
CLPB-205ENST00000535477 ADGBQ8N7X0 1667 aa27.35■■□□□ 1.97
CLPB-205ENST00000535477 MBD5Q9P267 1494 aa27.34■■□□□ 1.97
CLPB-205ENST00000535477 WDR7Q9Y4E6 1490 aa27.34■■□□□ 1.97
CLPB-205ENST00000535477 NPM1P06748 294 aaKnown RBP eCLIP27.34■■□□□ 1.97
CLPB-205ENST00000535477 C9orf84Q5VXU9 1444 aa27.33■■□□□ 1.97
CLPB-205ENST00000535477 ADGRL2O95490 1459 aa27.33■■□□□ 1.97
CLPB-205ENST00000535477 PLCH2O75038 1416 aa27.32■■□□□ 1.96
CLPB-205ENST00000535477 ARHGEF5Q12774 1597 aa27.3■■□□□ 1.96
CLPB-205ENST00000535477 ZNF316A6NFI3 1004 aaPredicted RBP27.3■■□□□ 1.96
CLPB-205ENST00000535477 SHANK2Q9UPX8 1470 aa27.3■■□□□ 1.96
CLPB-205ENST00000535477 MPHOSPH9Q99550 1183 aa27.29■■□□□ 1.96
CLPB-205ENST00000535477 SYCP2Q9BX26 1530 aa27.29■■□□□ 1.96
CLPB-205ENST00000535477 ASXL2Q76L83 1435 aa27.29■■□□□ 1.96
CLPB-205ENST00000535477 CCDC141Q6ZP82 1450 aa27.28■■□□□ 1.96
CLPB-205ENST00000535477 EFCAB2Q5VUJ9 269 aa27.28■■□□□ 1.96
CLPB-205ENST00000535477 RSPH4AQ5TD94 716 aa27.28■■□□□ 1.96
CLPB-205ENST00000535477 DENND4BO75064 1496 aaPredicted RBP27.23■■□□□ 1.95
CLPB-205ENST00000535477 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
CLPB-205ENST00000535477 ANKRD50Q9ULJ7 1429 aa27.23■■□□□ 1.95
CLPB-205ENST00000535477 PLEKHH2Q8IVE3 1493 aa27.22■■□□□ 1.95
CLPB-205ENST00000535477 FOXD1Q16676 465 aa27.21■■□□□ 1.95
CLPB-205ENST00000535477 KIAA1107Q9UPP5 1409 aa27.21■■□□□ 1.95
CLPB-205ENST00000535477 KIF15Q9NS87 1388 aa27.2■■□□□ 1.94
CLPB-205ENST00000535477 ARHGEF12Q9NZN5 1544 aa27.19■■□□□ 1.94
CLPB-205ENST00000535477 SLC4A1APQ9BWU0 796 aaKnown RBP27.19■■□□□ 1.94
CLPB-205ENST00000535477 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
CLPB-205ENST00000535477 TIMELESSQ9UNS1 1208 aa27.17■■□□□ 1.94
CLPB-205ENST00000535477 ABCA9Q8IUA7 1624 aa27.15■■□□□ 1.94
CLPB-205ENST00000535477 TONSLQ96HA7 1378 aa27.15■■□□□ 1.94
CLPB-205ENST00000535477 ABCC1P33527 1531 aa27.13■■□□□ 1.93
CLPB-205ENST00000535477 DIEXFQ68CQ4 756 aaKnown RBP27.12■■□□□ 1.93
CLPB-205ENST00000535477 ARAP3Q8WWN8 1544 aa27.12■■□□□ 1.93
CLPB-205ENST00000535477 FANCAO15360 1455 aa27.1■■□□□ 1.93
CLPB-205ENST00000535477 PZPP20742 1482 aa27.1■■□□□ 1.93
CLPB-205ENST00000535477 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
CLPB-205ENST00000535477 MAST1Q9Y2H9 1570 aa27.09■■□□□ 1.93
CLPB-205ENST00000535477 PPP1R15AO75807 674 aaPredicted RBP27.08■■□□□ 1.93
CLPB-205ENST00000535477 RIMBP3CA6NJZ7 1639 aa27.08■■□□□ 1.93
CLPB-205ENST00000535477 RIMBP3BA6NNM3 1639 aa27.08■■□□□ 1.93
CLPB-205ENST00000535477 RIMBP3Q9UFD9 1639 aa27.08■■□□□ 1.93
CLPB-205ENST00000535477 NUP155O75694 1391 aa27.07■■□□□ 1.92
CLPB-205ENST00000535477 AFAP1Q8N556 730 aa27.07■■□□□ 1.92
CLPB-205ENST00000535477 ANKRD30BQ9BXX2 1392 aa27.04■■□□□ 1.92
CLPB-205ENST00000535477 PKD2Q13563 968 aa27.02■■□□□ 1.92
CLPB-205ENST00000535477 SPAG9O60271 1321 aaKnown RBP27.01■■□□□ 1.91
CLPB-205ENST00000535477 CD109Q6YHK3 1445 aa27■■□□□ 1.91
CLPB-205ENST00000535477 PLXNC1O60486 1568 aa26.99■■□□□ 1.91
CLPB-205ENST00000535477 ADGRL1O94910 1474 aa26.99■■□□□ 1.91
CLPB-205ENST00000535477 SCAPERQ9BY12 1400 aa26.98■■□□□ 1.91
CLPB-205ENST00000535477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.96■■□□□ 1.91
CLPB-205ENST00000535477 MYT1LQ9UL68 1186 aa26.95■■□□□ 1.91
CLPB-205ENST00000535477 DUOX2Q9NRD8 1548 aa26.94■■□□□ 1.9
CLPB-205ENST00000535477 KDM5DQ9BY66 1539 aa26.93■■□□□ 1.9
CLPB-205ENST00000535477 RPRD2Q5VT52 1461 aaKnown RBP26.91■■□□□ 1.9
CLPB-205ENST00000535477 RTEL1-TNFRSF6BF6WH68 1400 aa26.91■■□□□ 1.9
CLPB-205ENST00000535477 L3MBTL2Q969R5 705 aa26.9■■□□□ 1.9
CLPB-205ENST00000535477 ZFYVE16Q7Z3T8 1539 aa26.89■■□□□ 1.9
CLPB-205ENST00000535477 ERBINQ96RT1 1412 aa26.88■■□□□ 1.89
CLPB-205ENST00000535477 FAM135AQ9P2D6 1515 aa26.87■■□□□ 1.89
CLPB-205ENST00000535477 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
CLPB-205ENST00000535477 UNC13BO14795 1591 aa26.84■■□□□ 1.89
CLPB-205ENST00000535477 CFAP74Q9C0B2 1584 aa26.82■■□□□ 1.88
CLPB-205ENST00000535477 INO80Q9ULG1 1556 aaPredicted RBP26.82■■□□□ 1.88
CLPB-205ENST00000535477 HIRIP3Q9BW71 556 aaPredicted RBP26.81■■□□□ 1.88
CLPB-205ENST00000535477 ZNF518AQ6AHZ1 1483 aa26.79■■□□□ 1.88
CLPB-205ENST00000535477 TEX14Q8IWB6 1497 aa26.77■■□□□ 1.88
CLPB-205ENST00000535477 FAM69CQ0P6D2 419 aa26.77■■□□□ 1.88
CLPB-205ENST00000535477 IQGAP3Q86VI3 1631 aa26.75■■□□□ 1.87
CLPB-205ENST00000535477 POGZQ7Z3K3 1410 aa26.74■■□□□ 1.87
CLPB-205ENST00000535477 MAGI2Q86UL8 1455 aa26.73■■□□□ 1.87
CLPB-205ENST00000535477 NEO1Q92859 1461 aa26.73■■□□□ 1.87
CLPB-205ENST00000535477 MAP3K4Q9Y6R4 1608 aa26.73■■□□□ 1.87
CLPB-205ENST00000535477 KIF3BO15066 747 aa26.72■■□□□ 1.87
CLPB-205ENST00000535477 RAPGEF3O95398 923 aa26.72■■□□□ 1.87
CLPB-205ENST00000535477 KIDINS220Q9ULH0 1771 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms