RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 ABCC5O15440 1437 aa19.91■□□□□ 0.78
LMO1-204ENST00000534484 ZCCHC11Q5TAX3 1644 aaKnown RBP19.91■□□□□ 0.78
LMO1-204ENST00000534484 PREX2Q70Z35 1606 aa19.9■□□□□ 0.78
LMO1-204ENST00000534484 ADGBQ8N7X0 1667 aa19.88■□□□□ 0.77
LMO1-204ENST00000534484 ACIN1Q9UKV3 1341 aaKnown RBP19.88■□□□□ 0.77
LMO1-204ENST00000534484 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
LMO1-204ENST00000534484 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
LMO1-204ENST00000534484 CFDP1Q9UEE9 299 aaPredicted RBP19.86■□□□□ 0.77
LMO1-204ENST00000534484 ARHGEF5Q12774 1597 aa19.84■□□□□ 0.77
LMO1-204ENST00000534484 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
LMO1-204ENST00000534484 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.77
LMO1-204ENST00000534484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.83■□□□□ 0.77
LMO1-204ENST00000534484 SHANK2Q9UPX8 1470 aa19.83■□□□□ 0.76
LMO1-204ENST00000534484 TTC37Q6PGP7 1564 aa19.81■□□□□ 0.76
LMO1-204ENST00000534484 MYO5CQ9NQX4 1742 aa19.81■□□□□ 0.76
LMO1-204ENST00000534484 KDM6BO15054 1643 aa19.8■□□□□ 0.76
LMO1-204ENST00000534484 SAMD9LQ8IVG5 1584 aa19.78■□□□□ 0.76
LMO1-204ENST00000534484 TIMELESSQ9UNS1 1208 aa19.77■□□□□ 0.76
LMO1-204ENST00000534484 NCOA1Q15788 1441 aa19.76■□□□□ 0.75
LMO1-204ENST00000534484 MBD5Q9P267 1494 aa19.76■□□□□ 0.75
LMO1-204ENST00000534484 ARAP3Q8WWN8 1544 aa19.76■□□□□ 0.75
LMO1-204ENST00000534484 RRP7BPQ9NSQ0 103 aa19.75■□□□□ 0.75
LMO1-204ENST00000534484 CHIC2Q9UKJ5 165 aa19.74■□□□□ 0.75
LMO1-204ENST00000534484 MAST1Q9Y2H9 1570 aa19.73■□□□□ 0.75
LMO1-204ENST00000534484 PLEKHH2Q8IVE3 1493 aa19.73■□□□□ 0.75
LMO1-204ENST00000534484 PLCH2O75038 1416 aa19.71■□□□□ 0.75
LMO1-204ENST00000534484 KIAA1107Q9UPP5 1409 aa19.71■□□□□ 0.75
LMO1-204ENST00000534484 RSPH4AQ5TD94 716 aa19.71■□□□□ 0.75
LMO1-204ENST00000534484 DENND4BO75064 1496 aaPredicted RBP19.71■□□□□ 0.75
LMO1-204ENST00000534484 CCDC141Q6ZP82 1450 aa19.7■□□□□ 0.74
LMO1-204ENST00000534484 ANKRD30AQ9BXX3 1397 aa19.7■□□□□ 0.74
LMO1-204ENST00000534484 WDR7Q9Y4E6 1490 aa19.69■□□□□ 0.74
LMO1-204ENST00000534484 C9orf84Q5VXU9 1444 aa19.68■□□□□ 0.74
LMO1-204ENST00000534484 ARHGAP5Q13017 1502 aa19.68■□□□□ 0.74
LMO1-204ENST00000534484 ABCA9Q8IUA7 1624 aa19.67■□□□□ 0.74
LMO1-204ENST00000534484 ZNF316A6NFI3 1004 aaPredicted RBP19.67■□□□□ 0.74
LMO1-204ENST00000534484 ZNF777Q9ULD5 760 aaPredicted RBP19.67■□□□□ 0.74
LMO1-204ENST00000534484 SYCP2Q9BX26 1530 aa19.64■□□□□ 0.73
LMO1-204ENST00000534484 PLXNC1O60486 1568 aa19.62■□□□□ 0.73
LMO1-204ENST00000534484 ABCC1P33527 1531 aa19.62■□□□□ 0.73
LMO1-204ENST00000534484 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
LMO1-204ENST00000534484 TSPY4P0CV99 314 aa19.6■□□□□ 0.73
LMO1-204ENST00000534484 TSPY10P0CW01 314 aa19.6■□□□□ 0.73
LMO1-204ENST00000534484 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
LMO1-204ENST00000534484 ANKRD50Q9ULJ7 1429 aa19.59■□□□□ 0.73
LMO1-204ENST00000534484 PZPP20742 1482 aa19.59■□□□□ 0.73
LMO1-204ENST00000534484 ASXL2Q76L83 1435 aa19.59■□□□□ 0.73
LMO1-204ENST00000534484 HNRNPMP52272 730 aaKnown RBP eCLIP19.58■□□□□ 0.72
LMO1-204ENST00000534484 MPHOSPH9Q99550 1183 aa19.58■□□□□ 0.72
LMO1-204ENST00000534484 ARHGEF12Q9NZN5 1544 aa19.57■□□□□ 0.72
LMO1-204ENST00000534484 EFCAB2Q5VUJ9 269 aa19.57■□□□□ 0.72
LMO1-204ENST00000534484 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
LMO1-204ENST00000534484 TRIM52Q96A61 297 aa19.55■□□□□ 0.72
LMO1-204ENST00000534484 KIF15Q9NS87 1388 aa19.54■□□□□ 0.72
LMO1-204ENST00000534484 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
LMO1-204ENST00000534484 PPP1R15AO75807 674 aaPredicted RBP19.52■□□□□ 0.72
LMO1-204ENST00000534484 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
LMO1-204ENST00000534484 UNC13BO14795 1591 aa19.51■□□□□ 0.71
LMO1-204ENST00000534484 RTEL1-TNFRSF6BF6WH68 1400 aa19.5■□□□□ 0.71
LMO1-204ENST00000534484 TONSLQ96HA7 1378 aa19.49■□□□□ 0.71
LMO1-204ENST00000534484 DUOX2Q9NRD8 1548 aa19.49■□□□□ 0.71
LMO1-204ENST00000534484 RPRD2Q5VT52 1461 aaKnown RBP19.48■□□□□ 0.71
LMO1-204ENST00000534484 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
LMO1-204ENST00000534484 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
LMO1-204ENST00000534484 FANCAO15360 1455 aa19.48■□□□□ 0.71
LMO1-204ENST00000534484 CFAP74Q9C0B2 1584 aa19.47■□□□□ 0.71
LMO1-204ENST00000534484 TRAPPC8Q9Y2L5 1435 aa19.46■□□□□ 0.71
LMO1-204ENST00000534484 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
LMO1-204ENST00000534484 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
LMO1-204ENST00000534484 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
LMO1-204ENST00000534484 ERBINQ96RT1 1412 aa19.45■□□□□ 0.7
LMO1-204ENST00000534484 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
LMO1-204ENST00000534484 MAGI2Q86UL8 1455 aa19.45■□□□□ 0.7
LMO1-204ENST00000534484 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
LMO1-204ENST00000534484 ZFYVE16Q7Z3T8 1539 aa19.44■□□□□ 0.7
LMO1-204ENST00000534484 IQGAP3Q86VI3 1631 aa19.42■□□□□ 0.7
LMO1-204ENST00000534484 NUP155O75694 1391 aa19.4■□□□□ 0.7
LMO1-204ENST00000534484 TEX14Q8IWB6 1497 aa19.4■□□□□ 0.7
LMO1-204ENST00000534484 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
LMO1-204ENST00000534484 ADGRL1O94910 1474 aa19.39■□□□□ 0.69
LMO1-204ENST00000534484 FAM135AQ9P2D6 1515 aa19.39■□□□□ 0.69
LMO1-204ENST00000534484 GLI2P10070 1586 aa19.38■□□□□ 0.69
LMO1-204ENST00000534484 ATP7AQ04656 1500 aa19.37■□□□□ 0.69
LMO1-204ENST00000534484 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
LMO1-204ENST00000534484 CD109Q6YHK3 1445 aa19.35■□□□□ 0.69
LMO1-204ENST00000534484 SCAPERQ9BY12 1400 aa19.35■□□□□ 0.69
LMO1-204ENST00000534484 PKD2Q13563 968 aa19.35■□□□□ 0.69
LMO1-204ENST00000534484 EIF2AK4Q9P2K8 1649 aaKnown RBP19.35■□□□□ 0.69
LMO1-204ENST00000534484 MAP3K4Q9Y6R4 1608 aa19.35■□□□□ 0.69
LMO1-204ENST00000534484 SPAG9O60271 1321 aaKnown RBP19.34■□□□□ 0.69
LMO1-204ENST00000534484 FOXD1Q16676 465 aa19.34■□□□□ 0.69
LMO1-204ENST00000534484 NEO1Q92859 1461 aa19.34■□□□□ 0.69
LMO1-204ENST00000534484 KDM5CP41229 1560 aa19.33■□□□□ 0.69
LMO1-204ENST00000534484 KIDINS220Q9ULH0 1771 aa19.32■□□□□ 0.68
LMO1-204ENST00000534484 ZNF518AQ6AHZ1 1483 aa19.32■□□□□ 0.68
LMO1-204ENST00000534484 AFAP1Q8N556 730 aa19.3■□□□□ 0.68
LMO1-204ENST00000534484 ATP10AO60312 1499 aa19.29■□□□□ 0.68
LMO1-204ENST00000534484 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
LMO1-204ENST00000534484 L3MBTL2Q969R5 705 aa19.29■□□□□ 0.68
LMO1-204ENST00000534484 VWDEQ8N2E2 1590 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms