RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 TEX14Q8IWB6 1497 aa18.26■□□□□ 0.51
CTSC-209ENST00000534131 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
CTSC-209ENST00000534131 NCOA2Q15596 1464 aa18.24■□□□□ 0.51
CTSC-209ENST00000534131 KDM6BO15054 1643 aa18.23■□□□□ 0.51
CTSC-209ENST00000534131 CDC42BPBQ9Y5S2 1711 aa18.23■□□□□ 0.51
CTSC-209ENST00000534131 PREX2Q70Z35 1606 aa18.23■□□□□ 0.51
CTSC-209ENST00000534131 PLCH2O75038 1416 aa18.21■□□□□ 0.51
CTSC-209ENST00000534131 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.51
CTSC-209ENST00000534131 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
CTSC-209ENST00000534131 ARAP3Q8WWN8 1544 aa18.2■□□□□ 0.5
CTSC-209ENST00000534131 EFCAB2Q5VUJ9 269 aa18.19■□□□□ 0.5
CTSC-209ENST00000534131 PPARGC1BQ86YN6 1023 aaKnown RBP18.19■□□□□ 0.5
CTSC-209ENST00000534131 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
CTSC-209ENST00000534131 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
CTSC-209ENST00000534131 GPATCH8Q9UKJ3 1502 aaKnown RBP18.17■□□□□ 0.5
CTSC-209ENST00000534131 FANCAO15360 1455 aa18.16■□□□□ 0.5
CTSC-209ENST00000534131 NEO1Q92859 1461 aa18.16■□□□□ 0.5
CTSC-209ENST00000534131 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
CTSC-209ENST00000534131 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
CTSC-209ENST00000534131 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
CTSC-209ENST00000534131 MIA2Q96PC5 1412 aa18.11■□□□□ 0.49
CTSC-209ENST00000534131 PLEKHH2Q8IVE3 1493 aa18.1■□□□□ 0.49
CTSC-209ENST00000534131 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
CTSC-209ENST00000534131 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
CTSC-209ENST00000534131 PTPN23Q9H3S7 1636 aa18.07■□□□□ 0.48
CTSC-209ENST00000534131 SAMD9LQ8IVG5 1584 aa18.07■□□□□ 0.48
CTSC-209ENST00000534131 COL17A1Q9UMD9 1497 aaPredicted RBP18.06■□□□□ 0.48
CTSC-209ENST00000534131 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
CTSC-209ENST00000534131 CAMSAP2Q08AD1 1489 aa18.05■□□□□ 0.48
CTSC-209ENST00000534131 SCAPERQ9BY12 1400 aa18.05■□□□□ 0.48
CTSC-209ENST00000534131 ABCC1P33527 1531 aa18.04■□□□□ 0.48
CTSC-209ENST00000534131 DENND4BO75064 1496 aaPredicted RBP18.04■□□□□ 0.48
CTSC-209ENST00000534131 RSPH4AQ5TD94 716 aa18.04■□□□□ 0.48
CTSC-209ENST00000534131 KIAA1107Q9UPP5 1409 aa18.02■□□□□ 0.48
CTSC-209ENST00000534131 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
CTSC-209ENST00000534131 SYCP2Q9BX26 1530 aa18.01■□□□□ 0.47
CTSC-209ENST00000534131 RICTORQ6R327 1708 aa18.01■□□□□ 0.47
CTSC-209ENST00000534131 HNRNPMP52272 730 aaKnown RBP eCLIP18■□□□□ 0.47
CTSC-209ENST00000534131 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
CTSC-209ENST00000534131 TCOF1Q13428 1488 aaKnown RBP18■□□□□ 0.47
CTSC-209ENST00000534131 ZNF644Q9H582 1327 aaPredicted RBP17.99■□□□□ 0.47
CTSC-209ENST00000534131 ZNF518AQ6AHZ1 1483 aa17.99■□□□□ 0.47
CTSC-209ENST00000534131 KDM4FA0A1W2PPD8 638 aa17.98■□□□□ 0.47
CTSC-209ENST00000534131 ARHGEF5Q12774 1597 aa17.97■□□□□ 0.47
CTSC-209ENST00000534131 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
CTSC-209ENST00000534131 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
CTSC-209ENST00000534131 POGZQ7Z3K3 1410 aa17.97■□□□□ 0.47
CTSC-209ENST00000534131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.468e-9■□□□□ 8.6
CTSC-209ENST00000534131 RAPGEF3O95398 923 aa17.95■□□□□ 0.46
CTSC-209ENST00000534131 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
CTSC-209ENST00000534131 CCDC141Q6ZP82 1450 aa17.95■□□□□ 0.46
CTSC-209ENST00000534131 ARHGEF12Q9NZN5 1544 aa17.94■□□□□ 0.46
CTSC-209ENST00000534131 DNMT1P26358 1616 aaKnown RBP17.94■□□□□ 0.46
CTSC-209ENST00000534131 TRAPPC8Q9Y2L5 1435 aa17.93■□□□□ 0.46
CTSC-209ENST00000534131 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
CTSC-209ENST00000534131 CROCC2H7BZ55 1655 aa17.93■□□□□ 0.46
CTSC-209ENST00000534131 MBD5Q9P267 1494 aa17.92■□□□□ 0.46
CTSC-209ENST00000534131 SPAG9O60271 1321 aaKnown RBP17.92■□□□□ 0.46
CTSC-209ENST00000534131 KDM5CP41229 1560 aa17.91■□□□□ 0.46
CTSC-209ENST00000534131 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
CTSC-209ENST00000534131 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
CTSC-209ENST00000534131 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
CTSC-209ENST00000534131 ZMYM4Q5VZL5 1548 aa17.91■□□□□ 0.46
CTSC-209ENST00000534131 DAPK1P53355 1430 aa17.89■□□□□ 0.46
CTSC-209ENST00000534131 ADGBQ8N7X0 1667 aa17.88■□□□□ 0.45
CTSC-209ENST00000534131 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
CTSC-209ENST00000534131 KCNA4P22459 653 aa17.87■□□□□ 0.45
CTSC-209ENST00000534131 ITGAEP38570 1179 aa17.87■□□□□ 0.45
CTSC-209ENST00000534131 RTEL1-TNFRSF6BF6WH68 1400 aa17.87■□□□□ 0.45
CTSC-209ENST00000534131 ATP7AQ04656 1500 aa17.87■□□□□ 0.45
CTSC-209ENST00000534131 ZFYVE16Q7Z3T8 1539 aa17.87■□□□□ 0.45
CTSC-209ENST00000534131 MAST1Q9Y2H9 1570 aa17.87■□□□□ 0.45
CTSC-209ENST00000534131 KIDINS220Q9ULH0 1771 aa17.86■□□□□ 0.45
CTSC-209ENST00000534131 SHANK2Q9UPX8 1470 aa17.86■□□□□ 0.45
CTSC-209ENST00000534131 ABCC5O15440 1437 aa17.85■□□□□ 0.45
CTSC-209ENST00000534131 INO80Q9ULG1 1556 aaPredicted RBP17.85■□□□□ 0.45
CTSC-209ENST00000534131 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
CTSC-209ENST00000534131 ANKRD30AQ9BXX3 1397 aa17.82■□□□□ 0.44
CTSC-209ENST00000534131 CHIC2Q9UKJ5 165 aa17.82■□□□□ 0.44
CTSC-209ENST00000534131 ARHGEF40Q8TER5 1519 aa17.82■□□□□ 0.44
CTSC-209ENST00000534131 PLXNC1O60486 1568 aa17.8■□□□□ 0.44
CTSC-209ENST00000534131 ATP10AO60312 1499 aa17.8■□□□□ 0.44
CTSC-209ENST00000534131 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
CTSC-209ENST00000534131 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
CTSC-209ENST00000534131 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
CTSC-209ENST00000534131 TRIM26Q12899 539 aaPredicted RBP17.77■□□□□ 0.44
CTSC-209ENST00000534131 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.44
CTSC-209ENST00000534131 ADGRL2O95490 1459 aa17.76■□□□□ 0.43
CTSC-209ENST00000534131 ROCK1Q13464 1354 aa17.76■□□□□ 0.43
CTSC-209ENST00000534131 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
CTSC-209ENST00000534131 A2MP01023 1474 aa17.75■□□□□ 0.43
CTSC-209ENST00000534131 REREQ9P2R6 1566 aa17.74■□□□□ 0.43
CTSC-209ENST00000534131 ARID4BQ4LE39 1312 aaPredicted RBP17.74■□□□□ 0.43
CTSC-209ENST00000534131 DUOX2Q9NRD8 1548 aa17.74■□□□□ 0.43
CTSC-209ENST00000534131 NCOA1Q15788 1441 aa17.73■□□□□ 0.43
CTSC-209ENST00000534131 KIF15Q9NS87 1388 aa17.73■□□□□ 0.43
CTSC-209ENST00000534131 PTPRKQ15262 1439 aa17.72■□□□□ 0.43
CTSC-209ENST00000534131 DHX29Q7Z478 1369 aaKnown RBP17.72■□□□□ 0.43
CTSC-209ENST00000534131 GCC2Q8IWJ2 1684 aa17.71■□□□□ 0.42
CTSC-209ENST00000534131 EIF2AK4Q9P2K8 1649 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms