RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 RCAN3Q9UKA8 241 aa5.21□□□□□ -1.58
SOX6-217ENST00000533870 SMG6Q86US8 1419 aaKnown RBP5.21□□□□□ -1.58
SOX6-217ENST00000533870 SIN3AQ96ST3 1273 aa5.21□□□□□ -1.58
SOX6-217ENST00000533870 ANKRD30AQ9BXX3 1397 aa5.21□□□□□ -1.58
SOX6-217ENST00000533870 MYOM3Q5VTT5 1437 aa5.2□□□□□ -1.58
SOX6-217ENST00000533870 FGD6Q6ZV73 1430 aa5.2□□□□□ -1.58
SOX6-217ENST00000533870 CASKIN1Q8WXD9 1431 aa5.2□□□□□ -1.58
SOX6-217ENST00000533870 CARD11Q9BXL7 1154 aa5.2□□□□□ -1.58
SOX6-217ENST00000533870 PABPN1Q86U42 306 aaKnown RBP eCLIP5.2□□□□□ -1.58
SOX6-217ENST00000533870 CCDC7Q96M83 1385 aa5.2□□□□□ -1.58
SOX6-217ENST00000533870 PLEKHD1A6NEE1 506 aa5.2□□□□□ -1.58
SOX6-217ENST00000533870 CHMP4AQ9BY43 222 aa5.2□□□□□ -1.58
SOX6-217ENST00000533870 GBP4Q96PP9 640 aa5.2□□□□□ -1.58
SOX6-217ENST00000533870 NPM2Q86SE8 214 aaKnown RBP5.19□□□□□ -1.58
SOX6-217ENST00000533870 IGF1RP08069 1367 aa5.19□□□□□ -1.58
SOX6-217ENST00000533870 TMF1P82094 1093 aa5.19□□□□□ -1.58
SOX6-217ENST00000533870 FAM43AQ8N2R8 423 aa5.19□□□□□ -1.58
SOX6-217ENST00000533870 KNSTRNQ9Y448 316 aa5.19□□□□□ -1.58
SOX6-217ENST00000533870 FAM161AQ3B820 660 aa5.19□□□□□ -1.58
SOX6-217ENST00000533870 CFDP1Q9UEE9 299 aaPredicted RBP5.19□□□□□ -1.58
SOX6-217ENST00000533870 PDE4AP27815 886 aa5.19□□□□□ -1.58
SOX6-217ENST00000533870 DDX11L8A8MPP1 907 aa5.18□□□□□ -1.58
SOX6-217ENST00000533870 RWDD1Q9H446 243 aaPredicted RBP5.18□□□□□ -1.58
SOX6-217ENST00000533870 HSP90AA1P07900 732 aaKnown RBP5.18□□□□□ -1.58
SOX6-217ENST00000533870 ZNF326Q5BKZ1 582 aaKnown RBP5.18□□□□□ -1.58
SOX6-217ENST00000533870 NBR1Q14596 966 aa5.18□□□□□ -1.58
SOX6-217ENST00000533870 PMFBP1Q8TBY8 1022 aa5.18□□□□□ -1.58
SOX6-217ENST00000533870 EFCAB5A4FU69 1503 aa5.18□□□□□ -1.58
SOX6-217ENST00000533870 CUX1P39880 1505 aa5.18□□□□□ -1.58
SOX6-217ENST00000533870 L3MBTL2Q969R5 705 aa5.18□□□□□ -1.58
SOX6-217ENST00000533870 MPHOSPH9Q99550 1183 aa5.18□□□□□ -1.58
SOX6-217ENST00000533870 B4GALNT3Q6L9W6 998 aa5.17□□□□□ -1.58
SOX6-217ENST00000533870 ROCK1Q13464 1354 aa5.17□□□□□ -1.58
SOX6-217ENST00000533870 CIZ1Q9ULV3 898 aaPredicted RBP5.17□□□□□ -1.58
SOX6-217ENST00000533870 RRP1P56182 461 aaKnown RBP5.17□□□□□ -1.58
SOX6-217ENST00000533870 MYH16Q9H6N6 1097 aa5.17□□□□□ -1.58
SOX6-217ENST00000533870 LRRC9Q6ZRR7 1453 aa5.17□□□□□ -1.58
SOX6-217ENST00000533870 FYCO1Q9BQS8 1478 aa5.17□□□□□ -1.58
SOX6-217ENST00000533870 GOLGA6L3A6NEY3 463 aa5.16□□□□□ -1.58
SOX6-217ENST00000533870 MAPK8IP2Q13387 824 aaPredicted RBP5.16□□□□□ -1.58
SOX6-217ENST00000533870 CCDC144AA2RUR9 1427 aa5.16□□□□□ -1.58
SOX6-217ENST00000533870 IPO8O15397 1037 aaKnown RBP5.16□□□□□ -1.58
SOX6-217ENST00000533870 CT47B1P0C2W7 299 aaPredicted RBP5.16□□□□□ -1.58
SOX6-217ENST00000533870 GOLGA2Q08379 1002 aa5.16□□□□□ -1.58
SOX6-217ENST00000533870 MRE11P49959 708 aa5.15□□□□□ -1.58
SOX6-217ENST00000533870 KLHL34Q8N239 644 aa5.15□□□□□ -1.58
SOX6-217ENST00000533870 CALD1Q05682 793 aaKnown RBP5.15□□□□□ -1.58
SOX6-217ENST00000533870 DHX29Q7Z478 1369 aaKnown RBP5.15□□□□□ -1.59
SOX6-217ENST00000533870 HSCBQ8IWL3 235 aa5.15□□□□□ -1.59
SOX6-217ENST00000533870 PIAS4Q8N2W9 510 aaPredicted RBP5.15□□□□□ -1.59
SOX6-217ENST00000533870 ZMYM3Q14202 1370 aa5.15□□□□□ -1.59
SOX6-217ENST00000533870 NRDCO43847 1150 aa5.15□□□□□ -1.59
SOX6-217ENST00000533870 NCBP3Q53F19 620 aaKnown RBP5.15□□□□□ -1.59
SOX6-217ENST00000533870 PLEKHH2Q8IVE3 1493 aa5.15□□□□□ -1.59
SOX6-217ENST00000533870 SCAPERQ9BY12 1400 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 PDE3AQ14432 1141 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 CSPP1Q1MSJ5 1256 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 CHMP5Q9NZZ3 219 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 TPM2P07951 284 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 SMARCA4P51532 1647 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 E9PSI1 815 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 SYAP1Q96A49 352 aaPredicted RBP5.14□□□□□ -1.59
SOX6-217ENST00000533870 BACH2Q9BYV9 841 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 RRP7BPQ9NSQ0 103 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 ZNF428Q96B54 188 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 P3H3Q8IVL6 736 aa5.14□□□□□ -1.59
SOX6-217ENST00000533870 CARMIL2Q6F5E8 1435 aa5.13□□□□□ -1.59
SOX6-217ENST00000533870 ARAP1Q96P48 1450 aa5.13□□□□□ -1.59
SOX6-217ENST00000533870 RRP9O43818 475 aaKnown RBP5.13□□□□□ -1.59
SOX6-217ENST00000533870 PDIA4P13667 645 aaKnown RBP5.13□□□□□ -1.59
SOX6-217ENST00000533870 CFTRP13569 1480 aa5.13□□□□□ -1.59
SOX6-217ENST00000533870 PDS5BQ9NTI5 1447 aa5.13□□□□□ -1.59
SOX6-217ENST00000533870 CASC1Q6TDU7 716 aa5.13□□□□□ -1.59
SOX6-217ENST00000533870 KIF16BQ96L93 1317 aa5.13□□□□□ -1.59
SOX6-217ENST00000533870 CHMP4CQ96CF2 233 aa5.12□□□□□ -1.59
SOX6-217ENST00000533870 KIF7Q2M1P5 1343 aa5.12□□□□□ -1.59
SOX6-217ENST00000533870 RNF123Q5XPI4 1314 aa5.12□□□□□ -1.59
SOX6-217ENST00000533870 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.12□□□□□ -1.59
SOX6-217ENST00000533870 CHIC2Q9UKJ5 165 aa5.12□□□□□ -1.59
SOX6-217ENST00000533870 TPM3P06753 285 aa5.12□□□□□ -1.59
SOX6-217ENST00000533870 HDAC5Q9UQL6 1122 aa5.12□□□□□ -1.59
SOX6-217ENST00000533870 HMGN5P82970 282 aaKnown RBP5.12□□□□□ -1.59
SOX6-217ENST00000533870 DHX8Q14562 1220 aaKnown RBP5.12□□□□□ -1.59
SOX6-217ENST00000533870 CHAF1AQ13111 956 aaPredicted RBP5.11□□□□□ -1.59
SOX6-217ENST00000533870 USP47Q96K76 1375 aa5.11□□□□□ -1.59
SOX6-217ENST00000533870 MSNP26038 577 aaKnown RBP5.11□□□□□ -1.59
SOX6-217ENST00000533870 PEG3Q9GZU2 1588 aa5.11□□□□□ -1.59
SOX6-217ENST00000533870 IRX6P78412 446 aaPredicted RBP5.11□□□□□ -1.59
SOX6-217ENST00000533870 PNISRQ8TF01 805 aaKnown RBP5.11□□□□□ -1.59
SOX6-217ENST00000533870 FGD5Q6ZNL6 1462 aa5.11□□□□□ -1.59
SOX6-217ENST00000533870 TERF1P54274 439 aa5.11□□□□□ -1.59
SOX6-217ENST00000533870 NAP1L5Q96NT1 182 aaPredicted RBP5.11□□□□□ -1.59
SOX6-217ENST00000533870 PKD2Q13563 968 aa5.11□□□□□ -1.59
SOX6-217ENST00000533870 HSP90AA2PQ14568 343 aaPredicted RBP5.11□□□□□ -1.59
SOX6-217ENST00000533870 LAS1LQ9Y4W2 734 aaKnown RBP5.11□□□□□ -1.59
SOX6-217ENST00000533870 KIAA2012Q0VF49 1180 aa5.1□□□□□ -1.59
SOX6-217ENST00000533870 HMGXB3Q12766 1538 aa5.1□□□□□ -1.59
SOX6-217ENST00000533870 MCM5P33992 734 aa5.1□□□□□ -1.59
SOX6-217ENST00000533870 NCOA1Q15788 1441 aa5.1□□□□□ -1.59
SOX6-217ENST00000533870 ZMYM4Q5VZL5 1548 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms