RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PTPRGP23470 1445 aa17.26■□□□□ 0.35
CCDC90B-218ENST00000533761 CLIP1P30622 1438 aa17.26■□□□□ 0.35
CCDC90B-218ENST00000533761 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
CCDC90B-218ENST00000533761 TTBK1Q5TCY1 1321 aaPredicted RBP17.24■□□□□ 0.35
CCDC90B-218ENST00000533761 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
CCDC90B-218ENST00000533761 ARHGAP35Q9NRY4 1499 aa17.23■□□□□ 0.35
CCDC90B-218ENST00000533761 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
CCDC90B-218ENST00000533761 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
CCDC90B-218ENST00000533761 ZNF579Q8NAF0 562 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-218ENST00000533761 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
CCDC90B-218ENST00000533761 POTEMA6NI47 508 aa17.15■□□□□ 0.34
CCDC90B-218ENST00000533761 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
CCDC90B-218ENST00000533761 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
CCDC90B-218ENST00000533761 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
CCDC90B-218ENST00000533761 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
CCDC90B-218ENST00000533761 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
CCDC90B-218ENST00000533761 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC90B-218ENST00000533761 ABCA8O94911 1581 aa17.08■□□□□ 0.33
CCDC90B-218ENST00000533761 ABCC2Q92887 1545 aa17.08■□□□□ 0.32
CCDC90B-218ENST00000533761 POTEGQ6S5H5 508 aa17.07■□□□□ 0.32
CCDC90B-218ENST00000533761 RAPGEF6Q8TEU7 1601 aa17.06■□□□□ 0.32
CCDC90B-218ENST00000533761 ADCY10Q96PN6 1610 aa17.06■□□□□ 0.32
CCDC90B-218ENST00000533761 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-218ENST00000533761 POTEB2H3BUK9 544 aa17.03■□□□□ 0.32
CCDC90B-218ENST00000533761 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
CCDC90B-218ENST00000533761 GALR2O43603 387 aaPredicted RBP17.02■□□□□ 0.31
CCDC90B-218ENST00000533761 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
CCDC90B-218ENST00000533761 NUP153P49790 1475 aaKnown RBP17■□□□□ 0.31
CCDC90B-218ENST00000533761 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
CCDC90B-218ENST00000533761 HECW1Q76N89 1606 aa17■□□□□ 0.31
CCDC90B-218ENST00000533761 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
CCDC90B-218ENST00000533761 PCDH10Q9P2E7 1040 aa16.98■□□□□ 0.31
CCDC90B-218ENST00000533761 PCF11O94913 1555 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-218ENST00000533761 ATP10BO94823 1461 aa16.97■□□□□ 0.31
CCDC90B-218ENST00000533761 EPRSP07814 1512 aaKnown RBP16.95■□□□□ 0.3
CCDC90B-218ENST00000533761 ZCCHC11Q5TAX3 1644 aaKnown RBP16.95■□□□□ 0.3
CCDC90B-218ENST00000533761 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
CCDC90B-218ENST00000533761 CCDC18Q5T9S5 1454 aa16.94■□□□□ 0.3
CCDC90B-218ENST00000533761 MAPKBP1O60336 1514 aa16.92■□□□□ 0.3
CCDC90B-218ENST00000533761 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
CCDC90B-218ENST00000533761 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
CCDC90B-218ENST00000533761 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
CCDC90B-218ENST00000533761 LRRIQ1Q96JM4 1722 aa16.88■□□□□ 0.29
CCDC90B-218ENST00000533761 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
CCDC90B-218ENST00000533761 WDR7Q9Y4E6 1490 aa16.86■□□□□ 0.29
CCDC90B-218ENST00000533761 CREBZFQ9NS37 354 aa16.85■□□□□ 0.29
CCDC90B-218ENST00000533761 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
CCDC90B-218ENST00000533761 TIAM1Q13009 1591 aa16.82■□□□□ 0.28
CCDC90B-218ENST00000533761 MTUS2Q5JR59 1369 aa16.81■□□□□ 0.28
CCDC90B-218ENST00000533761 ABCC10Q5T3U5 1492 aa16.81■□□□□ 0.28
CCDC90B-218ENST00000533761 TROQ12816 1431 aaPredicted RBP16.8■□□□□ 0.28
CCDC90B-218ENST00000533761 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
CCDC90B-218ENST00000533761 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
CCDC90B-218ENST00000533761 CFAP43Q8NDM7 1665 aa16.79■□□□□ 0.28
CCDC90B-218ENST00000533761 PAK3O75914 559 aaPredicted RBP16.78■□□□□ 0.28
CCDC90B-218ENST00000533761 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-218ENST00000533761 DIP2BQ9P265 1576 aa16.76■□□□□ 0.27
CCDC90B-218ENST00000533761 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
CCDC90B-218ENST00000533761 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
CCDC90B-218ENST00000533761 PHF12Q96QT6 1004 aa16.76■□□□□ 0.27
CCDC90B-218ENST00000533761 GLI2P10070 1586 aa16.75■□□□□ 0.27
CCDC90B-218ENST00000533761 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-218ENST00000533761 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
CCDC90B-218ENST00000533761 KIF14Q15058 1648 aa16.74■□□□□ 0.27
CCDC90B-218ENST00000533761 KIF13AQ9H1H9 1805 aa16.72■□□□□ 0.27
CCDC90B-218ENST00000533761 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-218ENST00000533761 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
CCDC90B-218ENST00000533761 STAG3Q9UJ98 1225 aa16.7■□□□□ 0.26
CCDC90B-218ENST00000533761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC90B-218ENST00000533761 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
CCDC90B-218ENST00000533761 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-218ENST00000533761 METRNQ9UJH8 293 aa16.68■□□□□ 0.26
CCDC90B-218ENST00000533761 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
CCDC90B-218ENST00000533761 MAMSTRQ6ZN01 415 aa16.67■□□□□ 0.26
CCDC90B-218ENST00000533761 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
CCDC90B-218ENST00000533761 TTC37Q6PGP7 1564 aa16.66■□□□□ 0.26
CCDC90B-218ENST00000533761 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
CCDC90B-218ENST00000533761 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
CCDC90B-218ENST00000533761 PLCH2O75038 1416 aa16.64■□□□□ 0.25
CCDC90B-218ENST00000533761 POTEJP0CG39 1038 aa16.64■□□□□ 0.25
CCDC90B-218ENST00000533761 C7P10643 843 aa16.63■□□□□ 0.25
CCDC90B-218ENST00000533761 SLC39A7Q92504 469 aa16.63■□□□□ 0.25
CCDC90B-218ENST00000533761 MYO5CQ9NQX4 1742 aa16.62■□□□□ 0.25
CCDC90B-218ENST00000533761 ASTLQ6HA08 431 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-218ENST00000533761 TEX14Q8IWB6 1497 aa16.62■□□□□ 0.25
CCDC90B-218ENST00000533761 TSPOAP1O95153 1857 aa16.62■□□□□ 0.25
CCDC90B-218ENST00000533761 GPATCH8Q9UKJ3 1502 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-218ENST00000533761 LCE2DQ5TA82 110 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-218ENST00000533761 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
CCDC90B-218ENST00000533761 CFDP1Q9UEE9 299 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-218ENST00000533761 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
CCDC90B-218ENST00000533761 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
CCDC90B-218ENST00000533761 FANCAO15360 1455 aa16.58■□□□□ 0.25
CCDC90B-218ENST00000533761 ARHGAP5Q13017 1502 aa16.58■□□□□ 0.25
CCDC90B-218ENST00000533761 PREX2Q70Z35 1606 aa16.58■□□□□ 0.24
CCDC90B-218ENST00000533761 ITSN2Q9NZM3 1697 aa16.58■□□□□ 0.24
CCDC90B-218ENST00000533761 PHLDB1Q86UU1 1377 aa16.57■□□□□ 0.24
CCDC90B-218ENST00000533761 MYOM3Q5VTT5 1437 aa16.57■□□□□ 0.24
CCDC90B-218ENST00000533761 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-218ENST00000533761 NEO1Q92859 1461 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms