RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 ZCCHC11Q5TAX3 1644 aaKnown RBP32.06■■■□□ 2.72
AP004608.1-202ENST00000533390 MAPKBP1O60336 1514 aa32.04■■■□□ 2.72
AP004608.1-202ENST00000533390 ABCC5O15440 1437 aa32.04■■■□□ 2.72
AP004608.1-202ENST00000533390 RRP7BPQ9NSQ0 103 aa32.02■■■□□ 2.72
AP004608.1-202ENST00000533390 ZNF777Q9ULD5 760 aaPredicted RBP32.02■■■□□ 2.72
AP004608.1-202ENST00000533390 KDM5BQ9UGL1 1544 aa32.02■■■□□ 2.72
AP004608.1-202ENST00000533390 ROCK1Q13464 1354 aa31.99■■■□□ 2.71
AP004608.1-202ENST00000533390 PREX2Q70Z35 1606 aa31.97■■■□□ 2.71
AP004608.1-202ENST00000533390 CROCC2H7BZ55 1655 aa31.96■■■□□ 2.71
AP004608.1-202ENST00000533390 ADGBQ8N7X0 1667 aa31.95■■■□□ 2.7
AP004608.1-202ENST00000533390 CDC42BPBQ9Y5S2 1711 aa31.94■■■□□ 2.7
AP004608.1-202ENST00000533390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.92■■■□□ 2.7
AP004608.1-202ENST00000533390 TTC37Q6PGP7 1564 aa31.91■■■□□ 2.7
AP004608.1-202ENST00000533390 MYO5CQ9NQX4 1742 aa31.89■■■□□ 2.7
AP004608.1-202ENST00000533390 ACIN1Q9UKV3 1341 aaKnown RBP31.87■■■□□ 2.69
AP004608.1-202ENST00000533390 KDM6BO15054 1643 aa31.85■■■□□ 2.69
AP004608.1-202ENST00000533390 KCNH8Q96L42 1107 aa31.84■■■□□ 2.69
AP004608.1-202ENST00000533390 ADGRL2O95490 1459 aa31.84■■■□□ 2.69
AP004608.1-202ENST00000533390 ARHGEF5Q12774 1597 aa31.82■■■□□ 2.68
AP004608.1-202ENST00000533390 SAMD9LQ8IVG5 1584 aa31.82■■■□□ 2.68
AP004608.1-202ENST00000533390 ARHGAP5Q13017 1502 aa31.82■■■□□ 2.68
AP004608.1-202ENST00000533390 SHANK2Q9UPX8 1470 aa31.82■■■□□ 2.68
AP004608.1-202ENST00000533390 NCOA1Q15788 1441 aa31.79■■■□□ 2.68
AP004608.1-202ENST00000533390 TRIM52Q96A61 297 aa31.78■■■□□ 2.68
AP004608.1-202ENST00000533390 ANKRD30AQ9BXX3 1397 aa31.78■■■□□ 2.68
AP004608.1-202ENST00000533390 ZNF316A6NFI3 1004 aaPredicted RBP31.74■■■□□ 2.67
AP004608.1-202ENST00000533390 TSPY4P0CV99 314 aa31.74■■■□□ 2.67
AP004608.1-202ENST00000533390 TSPY10P0CW01 314 aa31.74■■■□□ 2.67
AP004608.1-202ENST00000533390 SIN3AQ96ST3 1273 aa31.74■■■□□ 2.67
AP004608.1-202ENST00000533390 C9orf84Q5VXU9 1444 aa31.74■■■□□ 2.67
AP004608.1-202ENST00000533390 WDR7Q9Y4E6 1490 aa31.74■■■□□ 2.67
AP004608.1-202ENST00000533390 MBD5Q9P267 1494 aa31.73■■■□□ 2.67
AP004608.1-202ENST00000533390 HNRNPMP52272 730 aaKnown RBP eCLIP31.73■■■□□ 2.67
AP004608.1-202ENST00000533390 RSPH4AQ5TD94 716 aa31.73■■■□□ 2.67
AP004608.1-202ENST00000533390 CCDC141Q6ZP82 1450 aa31.72■■■□□ 2.67
AP004608.1-202ENST00000533390 NEUROD1Q13562 356 aa31.72■■■□□ 2.67
AP004608.1-202ENST00000533390 PLEKHH2Q8IVE3 1493 aa31.71■■■□□ 2.67
AP004608.1-202ENST00000533390 PLCH2O75038 1416 aa31.71■■■□□ 2.67
AP004608.1-202ENST00000533390 TIMELESSQ9UNS1 1208 aa31.69■■■□□ 2.66
AP004608.1-202ENST00000533390 SYCP2Q9BX26 1530 aa31.68■■■□□ 2.66
AP004608.1-202ENST00000533390 NPM1P06748 294 aaKnown RBP eCLIP31.65■■■□□ 2.66
AP004608.1-202ENST00000533390 KIAA1107Q9UPP5 1409 aa31.64■■■□□ 2.66
AP004608.1-202ENST00000533390 EFCAB2Q5VUJ9 269 aa31.63■■■□□ 2.65
AP004608.1-202ENST00000533390 MPHOSPH9Q99550 1183 aa31.63■■■□□ 2.65
AP004608.1-202ENST00000533390 ARAP3Q8WWN8 1544 aa31.62■■■□□ 2.65
AP004608.1-202ENST00000533390 ASXL2Q76L83 1435 aa31.61■■■□□ 2.65
AP004608.1-202ENST00000533390 ANKRD50Q9ULJ7 1429 aa31.61■■■□□ 2.65
AP004608.1-202ENST00000533390 MAST1Q9Y2H9 1570 aa31.6■■■□□ 2.65
AP004608.1-202ENST00000533390 DENND4BO75064 1496 aaPredicted RBP31.59■■■□□ 2.65
AP004608.1-202ENST00000533390 ABCA9Q8IUA7 1624 aa31.59■■■□□ 2.65
AP004608.1-202ENST00000533390 KIF15Q9NS87 1388 aa31.55■■■□□ 2.64
AP004608.1-202ENST00000533390 TONSLQ96HA7 1378 aa31.55■■■□□ 2.64
AP004608.1-202ENST00000533390 ABCC1P33527 1531 aa31.54■■■□□ 2.64
AP004608.1-202ENST00000533390 DIEXFQ68CQ4 756 aaKnown RBP31.51■■■□□ 2.63
AP004608.1-202ENST00000533390 SLC4A1APQ9BWU0 796 aaKnown RBP31.51■■■□□ 2.63
AP004608.1-202ENST00000533390 ARHGEF12Q9NZN5 1544 aa31.5■■■□□ 2.63
AP004608.1-202ENST00000533390 PLXNC1O60486 1568 aa31.47■■■□□ 2.63
AP004608.1-202ENST00000533390 PZPP20742 1482 aa31.47■■■□□ 2.63
AP004608.1-202ENST00000533390 PPP1R15AO75807 674 aaPredicted RBP31.44■■■□□ 2.62
AP004608.1-202ENST00000533390 FANCAO15360 1455 aa31.43■■■□□ 2.62
AP004608.1-202ENST00000533390 KDM5DQ9BY66 1539 aa31.4■■■□□ 2.62
AP004608.1-202ENST00000533390 FOXD1Q16676 465 aa31.4■■■□□ 2.62
AP004608.1-202ENST00000533390 ANKRD30BQ9BXX2 1392 aa31.39■■■□□ 2.62
AP004608.1-202ENST00000533390 RIMBP3CA6NJZ7 1639 aa31.39■■■□□ 2.62
AP004608.1-202ENST00000533390 RIMBP3BA6NNM3 1639 aa31.39■■■□□ 2.62
AP004608.1-202ENST00000533390 RIMBP3Q9UFD9 1639 aa31.39■■■□□ 2.62
AP004608.1-202ENST00000533390 TRAPPC8Q9Y2L5 1435 aa31.38■■■□□ 2.61
AP004608.1-202ENST00000533390 NUP155O75694 1391 aa31.38■■■□□ 2.61
AP004608.1-202ENST00000533390 DUOX2Q9NRD8 1548 aa31.35■■■□□ 2.61
AP004608.1-202ENST00000533390 ADGRL1O94910 1474 aa31.31■■■□□ 2.6
AP004608.1-202ENST00000533390 RPRD2Q5VT52 1461 aaKnown RBP31.31■■■□□ 2.6
AP004608.1-202ENST00000533390 RTEL1-TNFRSF6BF6WH68 1400 aa31.3■■■□□ 2.6
AP004608.1-202ENST00000533390 PKD2Q13563 968 aa31.3■■■□□ 2.6
AP004608.1-202ENST00000533390 CFAP74Q9C0B2 1584 aa31.3■■■□□ 2.6
AP004608.1-202ENST00000533390 SPAG9O60271 1321 aaKnown RBP31.3■■■□□ 2.6
AP004608.1-202ENST00000533390 CYB5RLQ6IPT4 315 aa31.29■■■□□ 2.6
AP004608.1-202ENST00000533390 UNC13BO14795 1591 aa31.29■■■□□ 2.6
AP004608.1-202ENST00000533390 ERBINQ96RT1 1412 aa31.28■■■□□ 2.6
AP004608.1-202ENST00000533390 CD109Q6YHK3 1445 aa31.27■■■□□ 2.6
AP004608.1-202ENST00000533390 ZFYVE16Q7Z3T8 1539 aa31.26■■■□□ 2.6
AP004608.1-202ENST00000533390 SCAPERQ9BY12 1400 aa31.26■■■□□ 2.59
AP004608.1-202ENST00000533390 AFAP1Q8N556 730 aa31.25■■■□□ 2.59
AP004608.1-202ENST00000533390 FAM135AQ9P2D6 1515 aa31.23■■■□□ 2.59
AP004608.1-202ENST00000533390 INO80Q9ULG1 1556 aaPredicted RBP31.21■■■□□ 2.59
AP004608.1-202ENST00000533390 ATP7AQ04656 1500 aa31.21■■■□□ 2.59
AP004608.1-202ENST00000533390 IQGAP3Q86VI3 1631 aa31.17■■■□□ 2.58
AP004608.1-202ENST00000533390 L3MBTL2Q969R5 705 aa31.16■■■□□ 2.58
AP004608.1-202ENST00000533390 TEX14Q8IWB6 1497 aa31.14■■■□□ 2.58
AP004608.1-202ENST00000533390 MAGI2Q86UL8 1455 aa31.14■■■□□ 2.57
AP004608.1-202ENST00000533390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.13■■■□□ 2.57
AP004608.1-202ENST00000533390 MYT1LQ9UL68 1186 aa31.13■■■□□ 2.57
AP004608.1-202ENST00000533390 ZNF518AQ6AHZ1 1483 aa31.13■■■□□ 2.57
AP004608.1-202ENST00000533390 NEO1Q92859 1461 aa31.08■■■□□ 2.57
AP004608.1-202ENST00000533390 MAP3K4Q9Y6R4 1608 aa31.08■■■□□ 2.57
AP004608.1-202ENST00000533390 GLI2P10070 1586 aa31.07■■■□□ 2.56
AP004608.1-202ENST00000533390 KIDINS220Q9ULH0 1771 aa31.06■■■□□ 2.56
AP004608.1-202ENST00000533390 POGZQ7Z3K3 1410 aa31.04■■■□□ 2.56
AP004608.1-202ENST00000533390 EIF2AK4Q9P2K8 1649 aaKnown RBP31.03■■■□□ 2.56
AP004608.1-202ENST00000533390 KDM5CP41229 1560 aa31.03■■■□□ 2.56
AP004608.1-202ENST00000533390 DEPDC5O75140 1603 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms