RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 PTPRGP23470 1445 aa20.66■□□□□ 0.9
CAPN1-224ENST00000533129 HIRIP3Q9BW71 556 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-224ENST00000533129 TROQ12816 1431 aaPredicted RBP20.62■□□□□ 0.89
CAPN1-224ENST00000533129 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
CAPN1-224ENST00000533129 FANCIQ9NVI1 1328 aa20.62■□□□□ 0.89
CAPN1-224ENST00000533129 MIA2Q96PC5 1412 aa20.62■□□□□ 0.89
CAPN1-224ENST00000533129 TONSLQ96HA7 1378 aa20.62■□□□□ 0.89
CAPN1-224ENST00000533129 TCOF1Q13428 1488 aaKnown RBP20.61■□□□□ 0.89
CAPN1-224ENST00000533129 MSH5O43196 834 aa20.59■□□□□ 0.89
CAPN1-224ENST00000533129 ADCY10Q96PN6 1610 aa20.59■□□□□ 0.89
CAPN1-224ENST00000533129 ATP10BO94823 1461 aa20.57■□□□□ 0.88
CAPN1-224ENST00000533129 ERCC6L2Q5T890 1561 aa20.57■□□□□ 0.88
CAPN1-224ENST00000533129 UACAQ9BZF9 1416 aa20.56■□□□□ 0.88
CAPN1-224ENST00000533129 HFM1A2PYH4 1435 aa20.54■□□□□ 0.88
CAPN1-224ENST00000533129 ERICH6BQ5W0A0 696 aa20.52■□□□□ 0.88
CAPN1-224ENST00000533129 PLEKHD1A6NEE1 506 aa20.51■□□□□ 0.87
CAPN1-224ENST00000533129 ABCC2Q92887 1545 aa20.51■□□□□ 0.87
CAPN1-224ENST00000533129 KDM5BQ9UGL1 1544 aa20.51■□□□□ 0.87
CAPN1-224ENST00000533129 ITSN2Q9NZM3 1697 aa20.51■□□□□ 0.87
CAPN1-224ENST00000533129 KIF14Q15058 1648 aa20.5■□□□□ 0.87
CAPN1-224ENST00000533129 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
CAPN1-224ENST00000533129 PTPRKQ15262 1439 aa20.48■□□□□ 0.87
CAPN1-224ENST00000533129 UHRF1BP1LA0JNW5 1464 aa20.45■□□□□ 0.86
CAPN1-224ENST00000533129 GPATCH8Q9UKJ3 1502 aaKnown RBP20.44■□□□□ 0.86
CAPN1-224ENST00000533129 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
CAPN1-224ENST00000533129 NAIPQ13075 1403 aa20.42■□□□□ 0.86
CAPN1-224ENST00000533129 AKNAQ7Z591 1439 aa20.42■□□□□ 0.86
CAPN1-224ENST00000533129 ERICH6Q7L0X2 663 aa20.42■□□□□ 0.86
CAPN1-224ENST00000533129 DNMT1P26358 1616 aaKnown RBP20.4■□□□□ 0.86
CAPN1-224ENST00000533129 MYT1LQ9UL68 1186 aa20.4■□□□□ 0.86
CAPN1-224ENST00000533129 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
CAPN1-224ENST00000533129 PPP4R2Q9NY27 417 aa20.39■□□□□ 0.85
CAPN1-224ENST00000533129 CFDP1Q9UEE9 299 aaPredicted RBP20.39■□□□□ 0.85
CAPN1-224ENST00000533129 CAMSAP2Q08AD1 1489 aa20.38■□□□□ 0.85
CAPN1-224ENST00000533129 DAPK1P53355 1430 aa20.38■□□□□ 0.85
CAPN1-224ENST00000533129 CDC42BPAQ5VT25 1732 aa20.37■□□□□ 0.85
CAPN1-224ENST00000533129 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-224ENST00000533129 GCC2Q8IWJ2 1684 aa20.37■□□□□ 0.85
CAPN1-224ENST00000533129 WASHC2AQ641Q2 1341 aa20.36■□□□□ 0.85
CAPN1-224ENST00000533129 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
CAPN1-224ENST00000533129 ZCCHC11Q5TAX3 1644 aaKnown RBP20.35■□□□□ 0.85
CAPN1-224ENST00000533129 ABCC5O15440 1437 aa20.35■□□□□ 0.85
CAPN1-224ENST00000533129 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
CAPN1-224ENST00000533129 ZNF644Q9H582 1327 aaPredicted RBP20.33■□□□□ 0.85
CAPN1-224ENST00000533129 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
CAPN1-224ENST00000533129 CHIC2Q9UKJ5 165 aa20.3■□□□□ 0.84
CAPN1-224ENST00000533129 PREX2Q70Z35 1606 aa20.3■□□□□ 0.84
CAPN1-224ENST00000533129 CROCC2H7BZ55 1655 aa20.28■□□□□ 0.84
CAPN1-224ENST00000533129 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
CAPN1-224ENST00000533129 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.84
CAPN1-224ENST00000533129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.27■□□□□ 0.842e-8■■■■□ 22.3
CAPN1-224ENST00000533129 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.83
CAPN1-224ENST00000533129 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
CAPN1-224ENST00000533129 ZBED9Q6R2W3 1325 aa20.26■□□□□ 0.83
CAPN1-224ENST00000533129 DENND4BO75064 1496 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-224ENST00000533129 ADGBQ8N7X0 1667 aa20.25■□□□□ 0.83
CAPN1-224ENST00000533129 NCOA1Q15788 1441 aa20.25■□□□□ 0.83
CAPN1-224ENST00000533129 CDC42BPBQ9Y5S2 1711 aa20.24■□□□□ 0.83
CAPN1-224ENST00000533129 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
CAPN1-224ENST00000533129 SHANK2Q9UPX8 1470 aa20.23■□□□□ 0.83
CAPN1-224ENST00000533129 POLR1AO95602 1720 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-224ENST00000533129 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-224ENST00000533129 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
CAPN1-224ENST00000533129 MYO5CQ9NQX4 1742 aa20.22■□□□□ 0.83
CAPN1-224ENST00000533129 CCDC184Q52MB2 194 aa20.21■□□□□ 0.83
CAPN1-224ENST00000533129 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
CAPN1-224ENST00000533129 SAMD9LQ8IVG5 1584 aa20.2■□□□□ 0.82
CAPN1-224ENST00000533129 KDM6BO15054 1643 aa20.2■□□□□ 0.82
CAPN1-224ENST00000533129 ARHGAP5Q13017 1502 aa20.19■□□□□ 0.82
CAPN1-224ENST00000533129 B4GALNT3Q6L9W6 998 aa20.17■□□□□ 0.82
CAPN1-224ENST00000533129 ANKRD30AQ9BXX3 1397 aa20.17■□□□□ 0.82
CAPN1-224ENST00000533129 MBD5Q9P267 1494 aa20.17■□□□□ 0.82
CAPN1-224ENST00000533129 WDR7Q9Y4E6 1490 aa20.17■□□□□ 0.82
CAPN1-224ENST00000533129 MRS2Q9HD23 443 aa20.16■□□□□ 0.82
CAPN1-224ENST00000533129 PLEKHH2Q8IVE3 1493 aa20.16■□□□□ 0.82
CAPN1-224ENST00000533129 C9orf84Q5VXU9 1444 aa20.15■□□□□ 0.82
CAPN1-224ENST00000533129 CCDC141Q6ZP82 1450 aa20.15■□□□□ 0.82
CAPN1-224ENST00000533129 PLCH2O75038 1416 aa20.15■□□□□ 0.82
CAPN1-224ENST00000533129 RSPH4AQ5TD94 716 aa20.15■□□□□ 0.82
CAPN1-224ENST00000533129 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.82
CAPN1-224ENST00000533129 DEKP35659 375 aaKnown RBP20.14■□□□□ 0.81
CAPN1-224ENST00000533129 NOP58Q9Y2X3 529 aaKnown RBP20.12■□□□□ 0.81
CAPN1-224ENST00000533129 KIAA1107Q9UPP5 1409 aa20.12■□□□□ 0.81
CAPN1-224ENST00000533129 ARAP3Q8WWN8 1544 aa20.12■□□□□ 0.81
CAPN1-224ENST00000533129 C11orf95C9JLR9 678 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-224ENST00000533129 TSPY4P0CV99 314 aa20.12■□□□□ 0.81
CAPN1-224ENST00000533129 TSPY10P0CW01 314 aa20.12■□□□□ 0.81
CAPN1-224ENST00000533129 SYCP2Q9BX26 1530 aa20.11■□□□□ 0.81
CAPN1-224ENST00000533129 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
CAPN1-224ENST00000533129 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
CAPN1-224ENST00000533129 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.81
CAPN1-224ENST00000533129 MPHOSPH9Q99550 1183 aa20.09■□□□□ 0.81
CAPN1-224ENST00000533129 MAST1Q9Y2H9 1570 aa20.08■□□□□ 0.81
CAPN1-224ENST00000533129 RPRD2Q5VT52 1461 aaKnown RBP20.08■□□□□ 0.81
CAPN1-224ENST00000533129 SPATA31E1Q6ZUB1 1445 aa20.08■□□□□ 0.8
CAPN1-224ENST00000533129 ASXL2Q76L83 1435 aa20.08■□□□□ 0.8
CAPN1-224ENST00000533129 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.8
CAPN1-224ENST00000533129 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
CAPN1-224ENST00000533129 EFCAB2Q5VUJ9 269 aa20.07■□□□□ 0.8
CAPN1-224ENST00000533129 ANKRD50Q9ULJ7 1429 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms