RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 ABCA9Q8IUA7 1624 aa16.04■□□□□ 0.16
PPFIA1-223ENST00000532793 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
PPFIA1-223ENST00000532793 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
PPFIA1-223ENST00000532793 EVX2Q03828 476 aa16.01■□□□□ 0.15
PPFIA1-223ENST00000532793 FHOD3Q2V2M9 1422 aa16■□□□□ 0.15
PPFIA1-223ENST00000532793 KCNA4P22459 653 aa15.98■□□□□ 0.15
PPFIA1-223ENST00000532793 ARAP3Q8WWN8 1544 aa15.98■□□□□ 0.15
PPFIA1-223ENST00000532793 PHLDB1Q86UU1 1377 aa15.98■□□□□ 0.15
PPFIA1-223ENST00000532793 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
PPFIA1-223ENST00000532793 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
PPFIA1-223ENST00000532793 NEO1Q92859 1461 aa15.94■□□□□ 0.14
PPFIA1-223ENST00000532793 CFAP74Q9C0B2 1584 aa15.93■□□□□ 0.14
PPFIA1-223ENST00000532793 FXR2P51116 673 aaKnown RBP eCLIP15.93■□□□□ 0.142e-8■■■■□ 19.6
PPFIA1-223ENST00000532793 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
PPFIA1-223ENST00000532793 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
PPFIA1-223ENST00000532793 HECW2Q9P2P5 1572 aa15.88■□□□□ 0.13
PPFIA1-223ENST00000532793 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
PPFIA1-223ENST00000532793 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
PPFIA1-223ENST00000532793 RAPGEF3O95398 923 aa15.86■□□□□ 0.13
PPFIA1-223ENST00000532793 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
PPFIA1-223ENST00000532793 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
PPFIA1-223ENST00000532793 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.85■□□□□ 0.13
PPFIA1-223ENST00000532793 FANCAO15360 1455 aa15.84■□□□□ 0.13
PPFIA1-223ENST00000532793 FRMPD1Q5SYB0 1578 aa15.84■□□□□ 0.13
PPFIA1-223ENST00000532793 DENND4BO75064 1496 aaPredicted RBP15.84■□□□□ 0.13
PPFIA1-223ENST00000532793 CDK13Q14004 1512 aaKnown RBP15.84■□□□□ 0.13
PPFIA1-223ENST00000532793 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.13
PPFIA1-223ENST00000532793 RICTORQ6R327 1708 aa15.83■□□□□ 0.13
PPFIA1-223ENST00000532793 ARID4BQ4LE39 1312 aaPredicted RBP15.83■□□□□ 0.12
PPFIA1-223ENST00000532793 AKNAQ7Z591 1439 aa15.82■□□□□ 0.12
PPFIA1-223ENST00000532793 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
PPFIA1-223ENST00000532793 ADAMTSL3P82987 1691 aa15.81■□□□□ 0.12
PPFIA1-223ENST00000532793 BCORL1Q5H9F3 1711 aa15.81■□□□□ 0.12
PPFIA1-223ENST00000532793 ARHGEF40Q8TER5 1519 aa15.8■□□□□ 0.12
PPFIA1-223ENST00000532793 CDK11AQ9UQ88 783 aaPredicted RBP15.8■□□□□ 0.12
PPFIA1-223ENST00000532793 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
PPFIA1-223ENST00000532793 KIF14Q15058 1648 aa15.78■□□□□ 0.12
PPFIA1-223ENST00000532793 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
PPFIA1-223ENST00000532793 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
PPFIA1-223ENST00000532793 PTPRMP28827 1452 aa15.76■□□□□ 0.11
PPFIA1-223ENST00000532793 CLIP1P30622 1438 aa15.76■□□□□ 0.11
PPFIA1-223ENST00000532793 ZMYM4Q5VZL5 1548 aa15.75■□□□□ 0.11
PPFIA1-223ENST00000532793 ZFYVE16Q7Z3T8 1539 aa15.75■□□□□ 0.11
PPFIA1-223ENST00000532793 RIMS1Q86UR5 1692 aaKnown RBP15.75■□□□□ 0.11
PPFIA1-223ENST00000532793 POGZQ7Z3K3 1410 aa15.75■□□□□ 0.11
PPFIA1-223ENST00000532793 PLCH2O75038 1416 aa15.73■□□□□ 0.11
PPFIA1-223ENST00000532793 MAGI2Q86UL8 1455 aa15.72■□□□□ 0.11
PPFIA1-223ENST00000532793 LRRIQ1Q96JM4 1722 aa15.72■□□□□ 0.11
PPFIA1-223ENST00000532793 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
PPFIA1-223ENST00000532793 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
PPFIA1-223ENST00000532793 EFCAB2Q5VUJ9 269 aa15.7■□□□□ 0.1
PPFIA1-223ENST00000532793 TROQ12816 1431 aaPredicted RBP15.69■□□□□ 0.1
PPFIA1-223ENST00000532793 ATF5Q9Y2D1 282 aaPredicted RBP15.69■□□□□ 0.1
PPFIA1-223ENST00000532793 CCDC18Q5T9S5 1454 aa15.69■□□□□ 0.1
PPFIA1-223ENST00000532793 FER1L4A9Z1Z3 1794 aa15.69■□□□□ 0.1
PPFIA1-223ENST00000532793 PCF11O94913 1555 aaKnown RBP15.68■□□□□ 0.1
PPFIA1-223ENST00000532793 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
PPFIA1-223ENST00000532793 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
PPFIA1-223ENST00000532793 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
PPFIA1-223ENST00000532793 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
PPFIA1-223ENST00000532793 ZNF518AQ6AHZ1 1483 aa15.65■□□□□ 0.1
PPFIA1-223ENST00000532793 CASKIN1Q8WXD9 1431 aa15.64■□□□□ 0.09
PPFIA1-223ENST00000532793 CDC42BPBQ9Y5S2 1711 aa15.64■□□□□ 0.09
PPFIA1-223ENST00000532793 PREX2Q70Z35 1606 aa15.64■□□□□ 0.09
PPFIA1-223ENST00000532793 SIGLEC1Q9BZZ2 1709 aa15.63■□□□□ 0.09
PPFIA1-223ENST00000532793 C9orf84Q5VXU9 1444 aa15.63■□□□□ 0.09
PPFIA1-223ENST00000532793 MLECQ14165 292 aa15.63■□□□□ 0.09
PPFIA1-223ENST00000532793 ATP10AO60312 1499 aa15.62■□□□□ 0.09
PPFIA1-223ENST00000532793 FYCO1Q9BQS8 1478 aa15.61■□□□□ 0.09
PPFIA1-223ENST00000532793 LHX8Q68G74 356 aa15.61■□□□□ 0.09
PPFIA1-223ENST00000532793 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
PPFIA1-223ENST00000532793 KDM5CP41229 1560 aa15.59■□□□□ 0.09
PPFIA1-223ENST00000532793 ITSN2Q9NZM3 1697 aa15.59■□□□□ 0.09
PPFIA1-223ENST00000532793 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
PPFIA1-223ENST00000532793 ABCC1P33527 1531 aa15.56■□□□□ 0.08
PPFIA1-223ENST00000532793 DIP2CQ9Y2E4 1556 aa15.55■□□□□ 0.08
PPFIA1-223ENST00000532793 ARHGEF12Q9NZN5 1544 aa15.55■□□□□ 0.08
PPFIA1-223ENST00000532793 AFAP1Q8N556 730 aa15.55■□□□□ 0.08
PPFIA1-223ENST00000532793 PREX1Q8TCU6 1659 aa15.54■□□□□ 0.08
PPFIA1-223ENST00000532793 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
PPFIA1-223ENST00000532793 ESF1Q9H501 851 aaKnown RBP15.53■□□□□ 0.08
PPFIA1-223ENST00000532793 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
PPFIA1-223ENST00000532793 MLH3Q9UHC1 1453 aa15.52■□□□□ 0.07
PPFIA1-223ENST00000532793 ZNF777Q9ULD5 760 aaPredicted RBP15.51■□□□□ 0.07
PPFIA1-223ENST00000532793 HSPA2P54652 639 aa15.5■□□□□ 0.07
PPFIA1-223ENST00000532793 TRAPPC8Q9Y2L5 1435 aa15.49■□□□□ 0.07
PPFIA1-223ENST00000532793 KIDINS220Q9ULH0 1771 aa15.49■□□□□ 0.07
PPFIA1-223ENST00000532793 FBXO41Q8TF61 875 aa15.48■□□□□ 0.07
PPFIA1-223ENST00000532793 SAMD9LQ8IVG5 1584 aa15.48■□□□□ 0.07
PPFIA1-223ENST00000532793 MTUS2Q5JR59 1369 aa15.48■□□□□ 0.07
PPFIA1-223ENST00000532793 GABBR2O75899 941 aa15.47■□□□□ 0.07
PPFIA1-223ENST00000532793 SETD1BQ9UPS6 1966 aaKnown RBP15.47■□□□□ 0.07
PPFIA1-223ENST00000532793 SYCP2Q9BX26 1530 aa15.47■□□□□ 0.07
PPFIA1-223ENST00000532793 C3P01024 1663 aa15.46■□□□□ 0.07
PPFIA1-223ENST00000532793 AGLP35573 1532 aa15.46■□□□□ 0.07
PPFIA1-223ENST00000532793 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.07
PPFIA1-223ENST00000532793 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.06
PPFIA1-223ENST00000532793 UHRF1BP1Q6BDS2 1440 aa15.45■□□□□ 0.06
PPFIA1-223ENST00000532793 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
PPFIA1-223ENST00000532793 GPATCH8Q9UKJ3 1502 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms