RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
AP004550.1-201ENST00000532652 EEA1Q15075 1411 aa21.29■■□□□ 1
AP004550.1-201ENST00000532652 MLECQ14165 292 aa21.28■■□□□ 1
AP004550.1-201ENST00000532652 STRCQ7RTU9 1775 aa21.26■□□□□ 0.99
AP004550.1-201ENST00000532652 SCAPERQ9BY12 1400 aa21.25■□□□□ 0.99
AP004550.1-201ENST00000532652 ARHGEF12Q9NZN5 1544 aa21.24■□□□□ 0.99
AP004550.1-201ENST00000532652 CERKQ8TCT0 537 aa21.24■□□□□ 0.99
AP004550.1-201ENST00000532652 PLCH2O75038 1416 aa21.23■□□□□ 0.99
AP004550.1-201ENST00000532652 ATP10AO60312 1499 aa21.21■□□□□ 0.99
AP004550.1-201ENST00000532652 LRRIQ1Q96JM4 1722 aa21.21■□□□□ 0.99
AP004550.1-201ENST00000532652 C9orf84Q5VXU9 1444 aa21.2■□□□□ 0.98
AP004550.1-201ENST00000532652 KIF14Q15058 1648 aa21.19■□□□□ 0.98
AP004550.1-201ENST00000532652 SOCS7O14512 581 aa21.19■□□□□ 0.98
AP004550.1-201ENST00000532652 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
AP004550.1-201ENST00000532652 C3P01024 1663 aa21.15■□□□□ 0.98
AP004550.1-201ENST00000532652 KDM5CP41229 1560 aa21.14■□□□□ 0.97
AP004550.1-201ENST00000532652 CEBPAP49715 358 aaPredicted RBP21.13■□□□□ 0.97
AP004550.1-201ENST00000532652 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
AP004550.1-201ENST00000532652 ZNF518AQ6AHZ1 1483 aa21.12■□□□□ 0.97
AP004550.1-201ENST00000532652 DIP2CQ9Y2E4 1556 aa21.11■□□□□ 0.97
AP004550.1-201ENST00000532652 ARHGAP5Q13017 1502 aa21.1■□□□□ 0.97
AP004550.1-201ENST00000532652 ILDR2Q71H61 639 aa21.1■□□□□ 0.97
AP004550.1-201ENST00000532652 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
AP004550.1-201ENST00000532652 ABCA6Q8N139 1617 aa21.1■□□□□ 0.97
AP004550.1-201ENST00000532652 FMN1Q68DA7 1419 aa21.09■□□□□ 0.97
AP004550.1-201ENST00000532652 REREQ9P2R6 1566 aa21.07■□□□□ 0.96
AP004550.1-201ENST00000532652 ARHGAP35Q9NRY4 1499 aa21.07■□□□□ 0.96
AP004550.1-201ENST00000532652 ITSN2Q9NZM3 1697 aa21.06■□□□□ 0.96
AP004550.1-201ENST00000532652 UHRF1BP1Q6BDS2 1440 aa21.06■□□□□ 0.96
AP004550.1-201ENST00000532652 AFAP1Q8N556 730 aa21.05■□□□□ 0.96
AP004550.1-201ENST00000532652 CDK11AQ9UQ88 783 aaPredicted RBP21.05■□□□□ 0.96
AP004550.1-201ENST00000532652 TROQ12816 1431 aaPredicted RBP21.04■□□□□ 0.96
AP004550.1-201ENST00000532652 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
AP004550.1-201ENST00000532652 DMRT2Q9Y5R5 561 aa21.04■□□□□ 0.96
AP004550.1-201ENST00000532652 MYT1LQ9UL68 1186 aa21.03■□□□□ 0.96
AP004550.1-201ENST00000532652 CDC42BPAQ5VT25 1732 aa21.03■□□□□ 0.96
AP004550.1-201ENST00000532652 KIDINS220Q9ULH0 1771 aa21.02■□□□□ 0.96
AP004550.1-201ENST00000532652 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
AP004550.1-201ENST00000532652 DISP3Q9P2K9 1392 aa21.01■□□□□ 0.95
AP004550.1-201ENST00000532652 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
AP004550.1-201ENST00000532652 CLIP1P30622 1438 aa21.01■□□□□ 0.95
AP004550.1-201ENST00000532652 MLH3Q9UHC1 1453 aa20.99■□□□□ 0.95
AP004550.1-201ENST00000532652 ABCC1P33527 1531 aa20.99■□□□□ 0.95
AP004550.1-201ENST00000532652 AGLP35573 1532 aa20.98■□□□□ 0.95
AP004550.1-201ENST00000532652 SUPT6HQ7KZ85 1726 aaKnown RBP20.98■□□□□ 0.95
AP004550.1-201ENST00000532652 PTPRTO14522 1441 aa20.97■□□□□ 0.95
AP004550.1-201ENST00000532652 SPATA31D1Q6ZQQ2 1576 aa20.96■□□□□ 0.95
AP004550.1-201ENST00000532652 MROH2AA6NES4 1674 aa20.96■□□□□ 0.95
AP004550.1-201ENST00000532652 TRAPPC8Q9Y2L5 1435 aa20.95■□□□□ 0.94
AP004550.1-201ENST00000532652 LTBP4Q8N2S1 1624 aa20.94■□□□□ 0.94
AP004550.1-201ENST00000532652 ESF1Q9H501 851 aaKnown RBP20.91■□□□□ 0.94
AP004550.1-201ENST00000532652 NCOA1Q15788 1441 aa20.88■□□□□ 0.93
AP004550.1-201ENST00000532652 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
AP004550.1-201ENST00000532652 IQSEC2Q5JU85 1478 aa20.88■□□□□ 0.93
AP004550.1-201ENST00000532652 CNTLNQ9NXG0 1405 aa20.87■□□□□ 0.93
AP004550.1-201ENST00000532652 CAMSAP1Q5T5Y3 1602 aa20.87■□□□□ 0.93
AP004550.1-201ENST00000532652 SAMD9LQ8IVG5 1584 aa20.87■□□□□ 0.93
AP004550.1-201ENST00000532652 CCDC18Q5T9S5 1454 aa20.87■□□□□ 0.93
AP004550.1-201ENST00000532652 ZNF142P52746 1687 aaPredicted RBP20.84■□□□□ 0.93
AP004550.1-201ENST00000532652 CASKIN1Q8WXD9 1431 aa20.83■□□□□ 0.93
AP004550.1-201ENST00000532652 MYO3AQ8NEV4 1616 aa20.82■□□□□ 0.92
AP004550.1-201ENST00000532652 SYCP2Q9BX26 1530 aa20.81■□□□□ 0.92
AP004550.1-201ENST00000532652 NPATQ14207 1427 aa20.8■□□□□ 0.92
AP004550.1-201ENST00000532652 ZMYM3Q14202 1370 aa20.77■□□□□ 0.92
AP004550.1-201ENST00000532652 ATP7AQ04656 1500 aa20.77■□□□□ 0.92
AP004550.1-201ENST00000532652 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
AP004550.1-201ENST00000532652 INO80Q9ULG1 1556 aaPredicted RBP20.76■□□□□ 0.91
AP004550.1-201ENST00000532652 ZNF777Q9ULD5 760 aaPredicted RBP20.76■□□□□ 0.91
AP004550.1-201ENST00000532652 ADGBQ8N7X0 1667 aa20.76■□□□□ 0.91
AP004550.1-201ENST00000532652 CEP170BQ9Y4F5 1589 aaPredicted RBP20.75■□□□□ 0.91
AP004550.1-201ENST00000532652 FYCO1Q9BQS8 1478 aa20.75■□□□□ 0.91
AP004550.1-201ENST00000532652 SPAG9O60271 1321 aaKnown RBP20.74■□□□□ 0.91
AP004550.1-201ENST00000532652 NCKAP5LQ9HCH0 1330 aa20.74■□□□□ 0.91
AP004550.1-201ENST00000532652 GPATCH8Q9UKJ3 1502 aaKnown RBP20.73■□□□□ 0.91
AP004550.1-201ENST00000532652 POLR1AO95602 1720 aaPredicted RBP20.73■□□□□ 0.91
AP004550.1-201ENST00000532652 ZNF335Q9H4Z2 1342 aaPredicted RBP20.72■□□□□ 0.91
AP004550.1-201ENST00000532652 HNRNPMP52272 730 aaKnown RBP eCLIP20.71■□□□□ 0.91
AP004550.1-201ENST00000532652 PLA2R1Q13018 1463 aa20.7■□□□□ 0.9
AP004550.1-201ENST00000532652 A2MP01023 1474 aa20.69■□□□□ 0.9
AP004550.1-201ENST00000532652 CHIC1Q5VXU3 224 aa20.69■□□□□ 0.9
AP004550.1-201ENST00000532652 TCOF1Q13428 1488 aaKnown RBP20.69■□□□□ 0.9
AP004550.1-201ENST00000532652 PTPRKQ15262 1439 aa20.68■□□□□ 0.9
AP004550.1-201ENST00000532652 UBAP1LF5GYI3 381 aa20.67■□□□□ 0.9
AP004550.1-201ENST00000532652 KIAA1107Q9UPP5 1409 aa20.67■□□□□ 0.9
AP004550.1-201ENST00000532652 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
AP004550.1-201ENST00000532652 PKD2Q13563 968 aa20.66■□□□□ 0.9
AP004550.1-201ENST00000532652 DNMT1P26358 1616 aaKnown RBP20.65■□□□□ 0.9
AP004550.1-201ENST00000532652 GGT6Q6P531 493 aa20.64■□□□□ 0.89
AP004550.1-201ENST00000532652 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
AP004550.1-201ENST00000532652 CFAP65Q6ZU64 1925 aaKnown RBP20.61■□□□□ 0.89
AP004550.1-201ENST00000532652 CCNB3Q8WWL7 1395 aa20.6■□□□□ 0.89
AP004550.1-201ENST00000532652 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
AP004550.1-201ENST00000532652 A2ML1A8K2U0 1454 aa20.59■□□□□ 0.89
AP004550.1-201ENST00000532652 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
AP004550.1-201ENST00000532652 NEURL4Q96JN8 1562 aa20.58■□□□□ 0.88
AP004550.1-201ENST00000532652 MTUS2Q5JR59 1369 aa20.55■□□□□ 0.88
AP004550.1-201ENST00000532652 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
AP004550.1-201ENST00000532652 ZNF644Q9H582 1327 aaPredicted RBP20.53■□□□□ 0.88
AP004550.1-201ENST00000532652 MBD5Q9P267 1494 aa20.52■□□□□ 0.88
AP004550.1-201ENST00000532652 CPS1P31327 1500 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms