RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 KIAA0586Q9BVV6 1533 aa9.2□□□□□ -0.94
TGFBR3-209ENST00000532540 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
TGFBR3-209ENST00000532540 SLC4A1APQ9BWU0 796 aaKnown RBP9.2□□□□□ -0.94
TGFBR3-209ENST00000532540 BIVM-ERCC5R4GMW8 1640 aa9.19□□□□□ -0.94
TGFBR3-209ENST00000532540 IRX6P78412 446 aaPredicted RBP9.18□□□□□ -0.94
TGFBR3-209ENST00000532540 HIRIP3Q9BW71 556 aaPredicted RBP9.17□□□□□ -0.94
TGFBR3-209ENST00000532540 KIF3BO15066 747 aa9.17□□□□□ -0.94
TGFBR3-209ENST00000532540 PLEKHG5O94827 1062 aa9.17□□□□□ -0.94
TGFBR3-209ENST00000532540 ERICH3Q5RHP9 1530 aa9.17□□□□□ -0.94
TGFBR3-209ENST00000532540 KIF21BO75037 1637 aa9.17□□□□□ -0.94
TGFBR3-209ENST00000532540 CDK13Q14004 1512 aaKnown RBP9.16□□□□□ -0.94
TGFBR3-209ENST00000532540 HNRNPUQ00839 825 aaKnown RBP eCLIP9.15□□□□□ -0.945e-6■□□□□ 10.8
TGFBR3-209ENST00000532540 DDX10Q13206 875 aaKnown RBP9.15□□□□□ -0.94
TGFBR3-209ENST00000532540 NUTM2DQ5VT03 806 aaPredicted RBP9.15□□□□□ -0.94
TGFBR3-209ENST00000532540 SIN3AQ96ST3 1273 aa9.15□□□□□ -0.95
TGFBR3-209ENST00000532540 AEBP2Q6ZN18 517 aaPredicted RBP9.14□□□□□ -0.95
TGFBR3-209ENST00000532540 PODXL2Q9NZ53 605 aa9.14□□□□□ -0.95
TGFBR3-209ENST00000532540 IQGAP2Q13576 1575 aa9.14□□□□□ -0.95
TGFBR3-209ENST00000532540 SPAG9O60271 1321 aaKnown RBP9.13□□□□□ -0.95
TGFBR3-209ENST00000532540 TARBP1Q13395 1621 aaKnown RBP9.13□□□□□ -0.95
TGFBR3-209ENST00000532540 UACAQ9BZF9 1416 aa9.13□□□□□ -0.95
TGFBR3-209ENST00000532540 PPM1GO15355 546 aaPredicted RBP9.12□□□□□ -0.95
TGFBR3-209ENST00000532540 VSIG10Q8N0Z9 540 aa9.12□□□□□ -0.95
TGFBR3-209ENST00000532540 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
TGFBR3-209ENST00000532540 RIMBP3CA6NJZ7 1639 aa9.12□□□□□ -0.95
TGFBR3-209ENST00000532540 RIMBP3BA6NNM3 1639 aa9.12□□□□□ -0.95
TGFBR3-209ENST00000532540 RIMBP3Q9UFD9 1639 aa9.12□□□□□ -0.95
TGFBR3-209ENST00000532540 PPP4R2Q9NY27 417 aa9.11□□□□□ -0.95
TGFBR3-209ENST00000532540 ARHGEF11O15085 1522 aa9.11□□□□□ -0.95
TGFBR3-209ENST00000532540 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
TGFBR3-209ENST00000532540 ADAMTS12P58397 1594 aa9.09□□□□□ -0.96
TGFBR3-209ENST00000532540 IL27Q8NEV9 243 aa9.08□□□□□ -0.96
TGFBR3-209ENST00000532540 LAS1LQ9Y4W2 734 aaKnown RBP9.08□□□□□ -0.96
TGFBR3-209ENST00000532540 CCDC18Q5T9S5 1454 aa9.08□□□□□ -0.96
TGFBR3-209ENST00000532540 NAP1L5Q96NT1 182 aaPredicted RBP9.07□□□□□ -0.96
TGFBR3-209ENST00000532540 PPP1R15AO75807 674 aaPredicted RBP9.07□□□□□ -0.96
TGFBR3-209ENST00000532540 ERCC6L2Q5T890 1561 aa9.07□□□□□ -0.96
TGFBR3-209ENST00000532540 MSH5O43196 834 aa9.07□□□□□ -0.96
TGFBR3-209ENST00000532540 PKD2Q13563 968 aa9.06□□□□□ -0.96
TGFBR3-209ENST00000532540 CASKIN1Q8WXD9 1431 aa9.06□□□□□ -0.96
TGFBR3-209ENST00000532540 WASHC2CQ9Y4E1 1318 aa9.06□□□□□ -0.96
TGFBR3-209ENST00000532540 NUP160Q12769 1436 aa9.06□□□□□ -0.96
TGFBR3-209ENST00000532540 CEP170Q5SW79 1584 aa9.05□□□□□ -0.96
TGFBR3-209ENST00000532540 ABCA5Q8WWZ7 1642 aa9.05□□□□□ -0.96
TGFBR3-209ENST00000532540 CUL7Q14999 1698 aa9.05□□□□□ -0.96
TGFBR3-209ENST00000532540 SCAPERQ9BY12 1400 aa9.04□□□□□ -0.96
TGFBR3-209ENST00000532540 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
TGFBR3-209ENST00000532540 NUP155O75694 1391 aa9.04□□□□□ -0.96
TGFBR3-209ENST00000532540 SAFB2Q14151 953 aaKnown RBP eCLIP9.04□□□□□ -0.96
TGFBR3-209ENST00000532540 EPRSP07814 1512 aaKnown RBP9.04□□□□□ -0.96
TGFBR3-209ENST00000532540 NCOA2Q15596 1464 aa9.03□□□□□ -0.96
TGFBR3-209ENST00000532540 CD109Q6YHK3 1445 aa9.03□□□□□ -0.96
TGFBR3-209ENST00000532540 LRRC9Q6ZRR7 1453 aa9.02□□□□□ -0.96
TGFBR3-209ENST00000532540 IPO9Q96P70 1041 aaKnown RBP9.02□□□□□ -0.96
TGFBR3-209ENST00000532540 ATP10BO94823 1461 aa9.02□□□□□ -0.97
TGFBR3-209ENST00000532540 ASXL2Q76L83 1435 aa9.02□□□□□ -0.97
TGFBR3-209ENST00000532540 CEBPAP49715 358 aaPredicted RBP9.02□□□□□ -0.97
TGFBR3-209ENST00000532540 B4GALNT3Q6L9W6 998 aa9.02□□□□□ -0.97
TGFBR3-209ENST00000532540 PBRM1Q86U86 1689 aa9.02□□□□□ -0.97
TGFBR3-209ENST00000532540 DISP1Q96F81 1524 aa9.02□□□□□ -0.97
TGFBR3-209ENST00000532540 HSP90AA1P07900 732 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-209ENST00000532540 USP35Q9P2H5 1018 aa9.01□□□□□ -0.97
TGFBR3-209ENST00000532540 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
TGFBR3-209ENST00000532540 ARHGAP5Q13017 1502 aa9.01□□□□□ -0.97
TGFBR3-209ENST00000532540 C14orf37Q86TY3 774 aa9.01□□□□□ -0.97
TGFBR3-209ENST00000532540 DDRGK1Q96HY6 314 aa9.01□□□□□ -0.97
TGFBR3-209ENST00000532540 HSP90AA2PQ14568 343 aaPredicted RBP9□□□□□ -0.97
TGFBR3-209ENST00000532540 TROQ12816 1431 aaPredicted RBP9□□□□□ -0.97
TGFBR3-209ENST00000532540 RAB3GAP2Q9H2M9 1393 aa9□□□□□ -0.97
TGFBR3-209ENST00000532540 CHD1O14646 1710 aa9□□□□□ -0.97
TGFBR3-209ENST00000532540 PCF11O94913 1555 aaKnown RBP9□□□□□ -0.97
TGFBR3-209ENST00000532540 DCAF11Q8TEB1 546 aa8.99□□□□□ -0.97
TGFBR3-209ENST00000532540 MPHOSPH9Q99550 1183 aa8.99□□□□□ -0.97
TGFBR3-209ENST00000532540 STK26Q9P289 416 aa8.99□□□□□ -0.97
TGFBR3-209ENST00000532540 NUP153P49790 1475 aaKnown RBP8.99□□□□□ -0.97
TGFBR3-209ENST00000532540 ANKRD30AQ9BXX3 1397 aa8.99□□□□□ -0.97
TGFBR3-209ENST00000532540 FGD6Q6ZV73 1430 aa8.98□□□□□ -0.97
TGFBR3-209ENST00000532540 MYOM3Q5VTT5 1437 aa8.97□□□□□ -0.97
TGFBR3-209ENST00000532540 FYCO1Q9BQS8 1478 aa8.97□□□□□ -0.97
TGFBR3-209ENST00000532540 NUTM2FA1L443 756 aa8.97□□□□□ -0.97
TGFBR3-209ENST00000532540 EFCAB5A4FU69 1503 aa8.97□□□□□ -0.97
TGFBR3-209ENST00000532540 A0A0U1RQG5 324 aaPredicted RBP8.96□□□□□ -0.97
TGFBR3-209ENST00000532540 CCER2I3L3R5 266 aa8.96□□□□□ -0.97
TGFBR3-209ENST00000532540 ARXQ96QS3 562 aa8.96□□□□□ -0.97
TGFBR3-209ENST00000532540 KIF15Q9NS87 1388 aa8.96□□□□□ -0.98
TGFBR3-209ENST00000532540 SENP3-EIF4A1A0A087X0R7 540 aa8.95□□□□□ -0.98
TGFBR3-209ENST00000532540 FAM9BQ8IZU0 186 aa8.95□□□□□ -0.98
TGFBR3-209ENST00000532540 PNNQ9H307 717 aaKnown RBP8.95□□□□□ -0.98
TGFBR3-209ENST00000532540 SETD5Q9C0A6 1442 aa8.94□□□□□ -0.98
TGFBR3-209ENST00000532540 KIAA0556O60303 1618 aa8.94□□□□□ -0.98
TGFBR3-209ENST00000532540 KANK1Q14678 1352 aa8.93□□□□□ -0.98
TGFBR3-209ENST00000532540 TNNT2P45379 298 aaPredicted RBP8.93□□□□□ -0.98
TGFBR3-209ENST00000532540 GSE1Q14687 1217 aa8.93□□□□□ -0.98
TGFBR3-209ENST00000532540 FBXO31Q5XUX0 539 aaPredicted RBP8.93□□□□□ -0.98
TGFBR3-209ENST00000532540 UGGT2Q9NYU1 1516 aa8.93□□□□□ -0.98
TGFBR3-209ENST00000532540 RSPH4AQ5TD94 716 aa8.93□□□□□ -0.98
TGFBR3-209ENST00000532540 PAK3O75914 559 aaPredicted RBP8.91□□□□□ -0.98
TGFBR3-209ENST00000532540 ANP32BQ92688 251 aaKnown RBP8.91□□□□□ -0.98
TGFBR3-209ENST00000532540 BRPF3Q9ULD4 1205 aa8.91□□□□□ -0.98
TGFBR3-209ENST00000532540 HECW1Q76N89 1606 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms