RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 RAB3GAP2Q9H2M9 1393 aa21.15■□□□□ 0.98
PPFIA1-222ENST00000532504 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
PPFIA1-222ENST00000532504 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
PPFIA1-222ENST00000532504 EID1Q9Y6B2 187 aa21.12■□□□□ 0.97
PPFIA1-222ENST00000532504 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
PPFIA1-222ENST00000532504 MYT1Q01538 1121 aa21.08■□□□□ 0.97
PPFIA1-222ENST00000532504 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
PPFIA1-222ENST00000532504 AFAP1Q8N556 730 aa21.06■□□□□ 0.96
PPFIA1-222ENST00000532504 NPM2Q86SE8 214 aaKnown RBP21.05■□□□□ 0.96
PPFIA1-222ENST00000532504 TMF1P82094 1093 aa21.04■□□□□ 0.96
PPFIA1-222ENST00000532504 CFAP53Q96M91 514 aa21.04■□□□□ 0.96
PPFIA1-222ENST00000532504 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
PPFIA1-222ENST00000532504 CC2D1BQ5T0F9 858 aaKnown RBP21.03■□□□□ 0.96
PPFIA1-222ENST00000532504 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
PPFIA1-222ENST00000532504 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
PPFIA1-222ENST00000532504 PAK3O75914 559 aaPredicted RBP21■□□□□ 0.95
PPFIA1-222ENST00000532504 NUTM2FA1L443 756 aa20.99■□□□□ 0.95
PPFIA1-222ENST00000532504 MIER1Q8N108 512 aa20.99■□□□□ 0.95
PPFIA1-222ENST00000532504 ABCA10Q8WWZ4 1543 aa20.98■□□□□ 0.95
PPFIA1-222ENST00000532504 NEUROD2Q15784 382 aa20.97■□□□□ 0.95
PPFIA1-222ENST00000532504 ARXQ96QS3 562 aa20.96■□□□□ 0.95
PPFIA1-222ENST00000532504 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
PPFIA1-222ENST00000532504 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
PPFIA1-222ENST00000532504 KIF21BO75037 1637 aa20.94■□□□□ 0.94
PPFIA1-222ENST00000532504 ROCK2O75116 1388 aaKnown RBP20.94■□□□□ 0.94
PPFIA1-222ENST00000532504 PRXQ9BXM0 1461 aa20.93■□□□□ 0.94
PPFIA1-222ENST00000532504 L3MBTL2Q969R5 705 aa20.93■□□□□ 0.94
PPFIA1-222ENST00000532504 U2SURPO15042 1029 aaKnown RBP20.92■□□□□ 0.94
PPFIA1-222ENST00000532504 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
PPFIA1-222ENST00000532504 RAPGEF3O95398 923 aa20.91■□□□□ 0.94
PPFIA1-222ENST00000532504 HSPA5P11021 654 aaKnown RBP20.91■□□□□ 0.94
PPFIA1-222ENST00000532504 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
PPFIA1-222ENST00000532504 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
PPFIA1-222ENST00000532504 MYOM3Q5VTT5 1437 aa20.9■□□□□ 0.94
PPFIA1-222ENST00000532504 ARHGAP5Q13017 1502 aa20.9■□□□□ 0.94
PPFIA1-222ENST00000532504 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
PPFIA1-222ENST00000532504 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
PPFIA1-222ENST00000532504 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
PPFIA1-222ENST00000532504 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
PPFIA1-222ENST00000532504 KIF15Q9NS87 1388 aa20.88■□□□□ 0.93
PPFIA1-222ENST00000532504 PHLDB1Q86UU1 1377 aa20.87■□□□□ 0.93
PPFIA1-222ENST00000532504 LAS1LQ9Y4W2 734 aaKnown RBP20.87■□□□□ 0.93
PPFIA1-222ENST00000532504 HDGFL2Q7Z4V5 671 aaPredicted RBP20.86■□□□□ 0.93
PPFIA1-222ENST00000532504 MAPK8IP3Q9UPT6 1336 aa20.85■□□□□ 0.93
PPFIA1-222ENST00000532504 CCDC144AA2RUR9 1427 aa20.85■□□□□ 0.93
PPFIA1-222ENST00000532504 MORC1Q86VD1 984 aa20.84■□□□□ 0.93
PPFIA1-222ENST00000532504 FGD6Q6ZV73 1430 aa20.84■□□□□ 0.93
PPFIA1-222ENST00000532504 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
PPFIA1-222ENST00000532504 NCOA2Q15596 1464 aa20.84■□□□□ 0.93
PPFIA1-222ENST00000532504 UACAQ9BZF9 1416 aa20.83■□□□□ 0.93
PPFIA1-222ENST00000532504 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
PPFIA1-222ENST00000532504 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
PPFIA1-222ENST00000532504 NGDNQ8NEJ9 315 aaKnown RBP20.82■□□□□ 0.92
PPFIA1-222ENST00000532504 VGFO15240 615 aaPredicted RBP20.8■□□□□ 0.92
PPFIA1-222ENST00000532504 FKBP8Q14318 412 aa20.8■□□□□ 0.92
PPFIA1-222ENST00000532504 CSB-PGBD3P0DP91 1061 aa20.78■□□□□ 0.92
PPFIA1-222ENST00000532504 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.78■□□□□ 0.92
PPFIA1-222ENST00000532504 SCAPERQ9BY12 1400 aa20.78■□□□□ 0.92
PPFIA1-222ENST00000532504 CCDC9Q9Y3X0 531 aaKnown RBP20.76■□□□□ 0.91
PPFIA1-222ENST00000532504 FYCO1Q9BQS8 1478 aa20.76■□□□□ 0.91
PPFIA1-222ENST00000532504 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
PPFIA1-222ENST00000532504 IQGAP2Q13576 1575 aa20.74■□□□□ 0.91
PPFIA1-222ENST00000532504 TROQ12816 1431 aaPredicted RBP20.73■□□□□ 0.91
PPFIA1-222ENST00000532504 PLB1Q6P1J6 1458 aa20.73■□□□□ 0.91
PPFIA1-222ENST00000532504 IRX6P78412 446 aaPredicted RBP20.73■□□□□ 0.91
PPFIA1-222ENST00000532504 EIF3AQ14152 1382 aaKnown RBP20.72■□□□□ 0.91
PPFIA1-222ENST00000532504 ANKRD50Q9ULJ7 1429 aa20.72■□□□□ 0.91
PPFIA1-222ENST00000532504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.917e-6■■■■□ 19.6
PPFIA1-222ENST00000532504 MINK1Q8N4C8 1332 aaPredicted RBP20.69■□□□□ 0.9
PPFIA1-222ENST00000532504 CDK13Q14004 1512 aaKnown RBP20.69■□□□□ 0.9
PPFIA1-222ENST00000532504 TERF2IPQ9NYB0 399 aa20.68■□□□□ 0.9
PPFIA1-222ENST00000532504 ST20-MTHFSA0A0A6YYL1 179 aa20.65■□□□□ 0.9
PPFIA1-222ENST00000532504 CD109Q6YHK3 1445 aa20.65■□□□□ 0.9
PPFIA1-222ENST00000532504 NPHP1O15259 732 aa20.65■□□□□ 0.9
PPFIA1-222ENST00000532504 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
PPFIA1-222ENST00000532504 DHX57Q6P158 1386 aaKnown RBP20.62■□□□□ 0.89
PPFIA1-222ENST00000532504 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
PPFIA1-222ENST00000532504 CCDC136Q96JN2 1154 aa20.62■□□□□ 0.89
PPFIA1-222ENST00000532504 MYH16Q9H6N6 1097 aa20.62■□□□□ 0.89
PPFIA1-222ENST00000532504 HECW1Q76N89 1606 aa20.61■□□□□ 0.89
PPFIA1-222ENST00000532504 CUL7Q14999 1698 aa20.61■□□□□ 0.89
PPFIA1-222ENST00000532504 EPRSP07814 1512 aaKnown RBP20.6■□□□□ 0.89
PPFIA1-222ENST00000532504 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
PPFIA1-222ENST00000532504 U2AF1L5P0DN76 240 aaPredicted RBP20.59■□□□□ 0.89
PPFIA1-222ENST00000532504 U2AF1Q01081 240 aaKnown RBP eCLIP20.59■□□□□ 0.897e-8■■■■■ 45.8
PPFIA1-222ENST00000532504 PNNQ9H307 717 aaKnown RBP20.59■□□□□ 0.89
PPFIA1-222ENST00000532504 ARHGEF11O15085 1522 aa20.59■□□□□ 0.89
PPFIA1-222ENST00000532504 C9orf84Q5VXU9 1444 aa20.58■□□□□ 0.89
PPFIA1-222ENST00000532504 KTN1Q86UP2 1357 aaKnown RBP20.58■□□□□ 0.88
PPFIA1-222ENST00000532504 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.88
PPFIA1-222ENST00000532504 AMPHP49418 695 aa20.57■□□□□ 0.88
PPFIA1-222ENST00000532504 RTF1Q92541 710 aaKnown RBP20.57■□□□□ 0.88
PPFIA1-222ENST00000532504 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
PPFIA1-222ENST00000532504 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
PPFIA1-222ENST00000532504 PLEKHH2Q8IVE3 1493 aa20.54■□□□□ 0.88
PPFIA1-222ENST00000532504 FTSJ3Q8IY81 847 aaKnown RBP20.53■□□□□ 0.88
PPFIA1-222ENST00000532504 EVC2Q86UK5 1308 aa20.52■□□□□ 0.88
PPFIA1-222ENST00000532504 ATF3P18847 181 aa20.51■□□□□ 0.87
PPFIA1-222ENST00000532504 ZNF330Q9Y3S2 320 aaPredicted RBP20.5■□□□□ 0.87
PPFIA1-222ENST00000532504 PSME1Q06323 249 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms