RNA–Protein interactions for RNA: ENST00000532249.1

SOX9-AS1-209, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-209ENST00000532249 TRHP20396 242 aaPredicted RBP8.78□□□□□ -1
SOX9-AS1-209ENST00000532249 MAP3K1Q13233 1512 aa8.78□□□□□ -1
SOX9-AS1-209ENST00000532249 MYO5CQ9NQX4 1742 aa8.77□□□□□ -1
SOX9-AS1-209ENST00000532249 PLEKHD1A6NEE1 506 aa8.77□□□□□ -1.01
SOX9-AS1-209ENST00000532249 CDK13Q14004 1512 aaKnown RBP8.76□□□□□ -1.01
SOX9-AS1-209ENST00000532249 EHBP1L1Q8N3D4 1523 aa8.76□□□□□ -1.01
SOX9-AS1-209ENST00000532249 ARAP3Q8WWN8 1544 aa8.76□□□□□ -1.01
SOX9-AS1-209ENST00000532249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.76□□□□□ -1.01
SOX9-AS1-209ENST00000532249 ABCB7O75027 752 aa8.76□□□□□ -1.01
SOX9-AS1-209ENST00000532249 HNRNPUL2Q1KMD3 747 aaKnown RBP8.76□□□□□ -1.01
SOX9-AS1-209ENST00000532249 TROQ12816 1431 aaPredicted RBP8.75□□□□□ -1.01
SOX9-AS1-209ENST00000532249 ITSN2Q9NZM3 1697 aa8.75□□□□□ -1.01
SOX9-AS1-209ENST00000532249 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
SOX9-AS1-209ENST00000532249 PHLDB1Q86UU1 1377 aa8.74□□□□□ -1.01
SOX9-AS1-209ENST00000532249 TIAM1Q13009 1591 aa8.74□□□□□ -1.01
SOX9-AS1-209ENST00000532249 LOC105371045A0A1W2PR82 267 aa8.74□□□□□ -1.01
SOX9-AS1-209ENST00000532249 FAM69CQ0P6D2 419 aa8.74□□□□□ -1.01
SOX9-AS1-209ENST00000532249 SUPT6HQ7KZ85 1726 aaKnown RBP8.74□□□□□ -1.01
SOX9-AS1-209ENST00000532249 PPRC1Q5VV67 1664 aaKnown RBP8.73□□□□□ -1.01
SOX9-AS1-209ENST00000532249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.72□□□□□ -1.01
SOX9-AS1-209ENST00000532249 ATP1B4Q9UN42 357 aaPredicted RBP8.72□□□□□ -1.01
SOX9-AS1-209ENST00000532249 PREX2Q70Z35 1606 aa8.72□□□□□ -1.01
SOX9-AS1-209ENST00000532249 CD109Q6YHK3 1445 aa8.71□□□□□ -1.01
SOX9-AS1-209ENST00000532249 NEO1Q92859 1461 aa8.71□□□□□ -1.01
SOX9-AS1-209ENST00000532249 TTC37Q6PGP7 1564 aa8.71□□□□□ -1.02
SOX9-AS1-209ENST00000532249 APLP2Q06481 763 aa8.71□□□□□ -1.02
SOX9-AS1-209ENST00000532249 MTUS2Q5JR59 1369 aa8.71□□□□□ -1.02
SOX9-AS1-209ENST00000532249 KDM6BO15054 1643 aa8.7□□□□□ -1.02
SOX9-AS1-209ENST00000532249 CDC42BPAQ5VT25 1732 aa8.69□□□□□ -1.02
SOX9-AS1-209ENST00000532249 ZNF219Q9P2Y4 722 aaPredicted RBP8.69□□□□□ -1.02
SOX9-AS1-209ENST00000532249 CDC42BPBQ9Y5S2 1711 aa8.68□□□□□ -1.02
SOX9-AS1-209ENST00000532249 FANCAO15360 1455 aa8.67□□□□□ -1.02
SOX9-AS1-209ENST00000532249 PLCH2O75038 1416 aa8.67□□□□□ -1.02
SOX9-AS1-209ENST00000532249 LRRC9Q6ZRR7 1453 aa8.67□□□□□ -1.02
SOX9-AS1-209ENST00000532249 KCNH8Q96L42 1107 aa8.67□□□□□ -1.02
SOX9-AS1-209ENST00000532249 ARHGAP5Q13017 1502 aa8.66□□□□□ -1.02
SOX9-AS1-209ENST00000532249 PLEKHH2Q8IVE3 1493 aa8.66□□□□□ -1.02
SOX9-AS1-209ENST00000532249 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
SOX9-AS1-209ENST00000532249 RICTORQ6R327 1708 aa8.64□□□□□ -1.03
SOX9-AS1-209ENST00000532249 CCNB3Q8WWL7 1395 aa8.63□□□□□ -1.03
SOX9-AS1-209ENST00000532249 EFCAB2Q5VUJ9 269 aa8.62□□□□□ -1.03
SOX9-AS1-209ENST00000532249 ABCC1P33527 1531 aa8.62□□□□□ -1.03
SOX9-AS1-209ENST00000532249 ZMYM4Q5VZL5 1548 aa8.62□□□□□ -1.03
SOX9-AS1-209ENST00000532249 ADGRL1O94910 1474 aa8.62□□□□□ -1.03
SOX9-AS1-209ENST00000532249 NCOA2Q15596 1464 aa8.62□□□□□ -1.03
SOX9-AS1-209ENST00000532249 ZNF518AQ6AHZ1 1483 aa8.62□□□□□ -1.03
SOX9-AS1-209ENST00000532249 MAGI2Q86UL8 1455 aa8.62□□□□□ -1.03
SOX9-AS1-209ENST00000532249 AKNAQ7Z591 1439 aa8.62□□□□□ -1.03
SOX9-AS1-209ENST00000532249 GPATCH8Q9UKJ3 1502 aaKnown RBP8.61□□□□□ -1.03
SOX9-AS1-209ENST00000532249 DENND4BO75064 1496 aaPredicted RBP8.61□□□□□ -1.03
SOX9-AS1-209ENST00000532249 MIA2Q96PC5 1412 aa8.61□□□□□ -1.03
SOX9-AS1-209ENST00000532249 COL17A1Q9UMD9 1497 aaPredicted RBP8.6□□□□□ -1.03
SOX9-AS1-209ENST00000532249 POGZQ7Z3K3 1410 aa8.6□□□□□ -1.03
SOX9-AS1-209ENST00000532249 KIAA1107Q9UPP5 1409 aa8.6□□□□□ -1.03
SOX9-AS1-209ENST00000532249 KDM5CP41229 1560 aa8.6□□□□□ -1.03
SOX9-AS1-209ENST00000532249 HECW2Q9P2P5 1572 aa8.6□□□□□ -1.03
SOX9-AS1-209ENST00000532249 HAX1O00165 279 aa8.59□□□□□ -1.03
SOX9-AS1-209ENST00000532249 MYOM3Q5VTT5 1437 aa8.59□□□□□ -1.03
SOX9-AS1-209ENST00000532249 SAMD9LQ8IVG5 1584 aa8.59□□□□□ -1.03
SOX9-AS1-209ENST00000532249 ARHGEF5Q12774 1597 aa8.58□□□□□ -1.04
SOX9-AS1-209ENST00000532249 FRMPD1Q5SYB0 1578 aa8.58□□□□□ -1.04
SOX9-AS1-209ENST00000532249 SLC4A1APQ9BWU0 796 aaKnown RBP8.58□□□□□ -1.04
SOX9-AS1-209ENST00000532249 ARHGEF40Q8TER5 1519 aa8.58□□□□□ -1.04
SOX9-AS1-209ENST00000532249 RSPH4AQ5TD94 716 aa8.57□□□□□ -1.04
SOX9-AS1-209ENST00000532249 CFDP1Q9UEE9 299 aaPredicted RBP8.57□□□□□ -1.04
SOX9-AS1-209ENST00000532249 SYCP2Q9BX26 1530 aa8.57□□□□□ -1.04
SOX9-AS1-209ENST00000532249 CAMSAP2Q08AD1 1489 aa8.57□□□□□ -1.04
SOX9-AS1-209ENST00000532249 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
SOX9-AS1-209ENST00000532249 ZFYVE16Q7Z3T8 1539 aa8.56□□□□□ -1.04
SOX9-AS1-209ENST00000532249 PTPN23Q9H3S7 1636 aa8.56□□□□□ -1.04
SOX9-AS1-209ENST00000532249 REREQ9P2R6 1566 aa8.56□□□□□ -1.04
SOX9-AS1-209ENST00000532249 ADGBQ8N7X0 1667 aa8.56□□□□□ -1.04
SOX9-AS1-209ENST00000532249 SCAPERQ9BY12 1400 aa8.55□□□□□ -1.04
SOX9-AS1-209ENST00000532249 CCDC141Q6ZP82 1450 aa8.55□□□□□ -1.04
SOX9-AS1-209ENST00000532249 MLH3Q9UHC1 1453 aa8.55□□□□□ -1.04
SOX9-AS1-209ENST00000532249 INO80Q9ULG1 1556 aaPredicted RBP8.54□□□□□ -1.04
SOX9-AS1-209ENST00000532249 MAST1Q9Y2H9 1570 aa8.53□□□□□ -1.04
SOX9-AS1-209ENST00000532249 TCOF1Q13428 1488 aaKnown RBP8.53□□□□□ -1.04
SOX9-AS1-209ENST00000532249 SHANK2Q9UPX8 1470 aa8.53□□□□□ -1.04
SOX9-AS1-209ENST00000532249 ATP7AQ04656 1500 aa8.53□□□□□ -1.04
SOX9-AS1-209ENST00000532249 FGD6Q6ZV73 1430 aa8.53□□□□□ -1.04
SOX9-AS1-209ENST00000532249 PLXNC1O60486 1568 aa8.52□□□□□ -1.04
SOX9-AS1-209ENST00000532249 DNMT1P26358 1616 aaKnown RBP8.52□□□□□ -1.05
SOX9-AS1-209ENST00000532249 PLSCR2Q9NRY7 297 aa8.52□□□□□ -1.05
SOX9-AS1-209ENST00000532249 KIDINS220Q9ULH0 1771 aa8.52□□□□□ -1.05
SOX9-AS1-209ENST00000532249 RTEL1-TNFRSF6BF6WH68 1400 aa8.52□□□□□ -1.05
SOX9-AS1-209ENST00000532249 SIGLEC1Q9BZZ2 1709 aa8.51□□□□□ -1.05
SOX9-AS1-209ENST00000532249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.51□□□□□ -1.05
SOX9-AS1-209ENST00000532249 KANK4Q5T7N3 995 aaPredicted RBP8.51□□□□□ -1.05
SOX9-AS1-209ENST00000532249 C9orf84Q5VXU9 1444 aa8.51□□□□□ -1.05
SOX9-AS1-209ENST00000532249 BCORL1Q5H9F3 1711 aa8.5□□□□□ -1.05
SOX9-AS1-209ENST00000532249 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
SOX9-AS1-209ENST00000532249 DIP2CQ9Y2E4 1556 aa8.5□□□□□ -1.05
SOX9-AS1-209ENST00000532249 ABCA6Q8N139 1617 aa8.5□□□□□ -1.05
SOX9-AS1-209ENST00000532249 EIF2AK4Q9P2K8 1649 aaKnown RBP8.5□□□□□ -1.05
SOX9-AS1-209ENST00000532249 MBD5Q9P267 1494 aa8.5□□□□□ -1.05
SOX9-AS1-209ENST00000532249 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
SOX9-AS1-209ENST00000532249 ATP10AO60312 1499 aa8.49□□□□□ -1.05
SOX9-AS1-209ENST00000532249 SPAG9O60271 1321 aaKnown RBP8.49□□□□□ -1.05
SOX9-AS1-209ENST00000532249 AGLP35573 1532 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms