RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PRG4Q92954 1404 aaPredicted RBP18.05■□□□□ 0.48
CHD7-211ENST00000532149 ADCY10Q96PN6 1610 aa18.05■□□□□ 0.48
CHD7-211ENST00000532149 PTPRGP23470 1445 aa18.04■□□□□ 0.48
CHD7-211ENST00000532149 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
CHD7-211ENST00000532149 MAGI3Q5TCQ9 1506 aa18.03■□□□□ 0.48
CHD7-211ENST00000532149 HFM1A2PYH4 1435 aa18.03■□□□□ 0.48
CHD7-211ENST00000532149 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
CHD7-211ENST00000532149 ITSN2Q9NZM3 1697 aa18.02■□□□□ 0.47
CHD7-211ENST00000532149 PLEKHD1A6NEE1 506 aa18.01■□□□□ 0.47
CHD7-211ENST00000532149 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
CHD7-211ENST00000532149 ITGAEP38570 1179 aa17.98■□□□□ 0.47
CHD7-211ENST00000532149 PLB1Q6P1J6 1458 aa17.98■□□□□ 0.47
CHD7-211ENST00000532149 ROCK1Q13464 1354 aa17.97■□□□□ 0.47
CHD7-211ENST00000532149 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.47
CHD7-211ENST00000532149 UACAQ9BZF9 1416 aa17.96■□□□□ 0.47
CHD7-211ENST00000532149 KIF14Q15058 1648 aa17.93■□□□□ 0.46
CHD7-211ENST00000532149 ATP10BO94823 1461 aa17.93■□□□□ 0.46
CHD7-211ENST00000532149 UHRF1BP1LA0JNW5 1464 aa17.92■□□□□ 0.46
CHD7-211ENST00000532149 NAIPQ13075 1403 aa17.9■□□□□ 0.46
CHD7-211ENST00000532149 RSPH4AQ5TD94 716 aa17.9■□□□□ 0.46
CHD7-211ENST00000532149 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
CHD7-211ENST00000532149 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
CHD7-211ENST00000532149 ABCB7O75027 752 aa17.89■□□□□ 0.45
CHD7-211ENST00000532149 GCC2Q8IWJ2 1684 aa17.89■□□□□ 0.45
CHD7-211ENST00000532149 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
CHD7-211ENST00000532149 DNMT1P26358 1616 aaKnown RBP17.88■□□□□ 0.45
CHD7-211ENST00000532149 GPATCH8Q9UKJ3 1502 aaKnown RBP17.88■□□□□ 0.45
CHD7-211ENST00000532149 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
CHD7-211ENST00000532149 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
CHD7-211ENST00000532149 CFDP1Q9UEE9 299 aaPredicted RBP17.87■□□□□ 0.45
CHD7-211ENST00000532149 DAPK1P53355 1430 aa17.85■□□□□ 0.45
CHD7-211ENST00000532149 ABCC10Q5T3U5 1492 aa17.83■□□□□ 0.45
CHD7-211ENST00000532149 PTPRKQ15262 1439 aa17.83■□□□□ 0.45
CHD7-211ENST00000532149 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
CHD7-211ENST00000532149 SHANK2Q9UPX8 1470 aa17.82■□□□□ 0.44
CHD7-211ENST00000532149 MAPKBP1O60336 1514 aa17.81■□□□□ 0.44
CHD7-211ENST00000532149 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
CHD7-211ENST00000532149 CAMSAP2Q08AD1 1489 aa17.8■□□□□ 0.44
CHD7-211ENST00000532149 ABCC5O15440 1437 aa17.8■□□□□ 0.44
CHD7-211ENST00000532149 PLEKHH2Q8IVE3 1493 aa17.79■□□□□ 0.44
CHD7-211ENST00000532149 KDM5BQ9UGL1 1544 aa17.78■□□□□ 0.44
CHD7-211ENST00000532149 ADGBQ8N7X0 1667 aa17.77■□□□□ 0.44
CHD7-211ENST00000532149 ARHGEF5Q12774 1597 aa17.77■□□□□ 0.44
CHD7-211ENST00000532149 CDC42BPAQ5VT25 1732 aa17.77■□□□□ 0.44
CHD7-211ENST00000532149 ANKRD30AQ9BXX3 1397 aa17.77■□□□□ 0.43
CHD7-211ENST00000532149 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
CHD7-211ENST00000532149 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
CHD7-211ENST00000532149 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
CHD7-211ENST00000532149 TSPY4P0CV99 314 aa17.73■□□□□ 0.43
CHD7-211ENST00000532149 TSPY10P0CW01 314 aa17.73■□□□□ 0.43
CHD7-211ENST00000532149 POTEHQ6S545 545 aa17.73■□□□□ 0.43
CHD7-211ENST00000532149 NCOA1Q15788 1441 aa17.72■□□□□ 0.43
CHD7-211ENST00000532149 KIAA1107Q9UPP5 1409 aa17.72■□□□□ 0.43
CHD7-211ENST00000532149 PREX2Q70Z35 1606 aa17.72■□□□□ 0.43
CHD7-211ENST00000532149 ARAP3Q8WWN8 1544 aa17.72■□□□□ 0.43
CHD7-211ENST00000532149 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.43
CHD7-211ENST00000532149 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
CHD7-211ENST00000532149 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
CHD7-211ENST00000532149 CHIC2Q9UKJ5 165 aa17.67■□□□□ 0.42
CHD7-211ENST00000532149 MYO5CQ9NQX4 1742 aa17.67■□□□□ 0.42
CHD7-211ENST00000532149 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
CHD7-211ENST00000532149 ZCCHC11Q5TAX3 1644 aaKnown RBP17.66■□□□□ 0.42
CHD7-211ENST00000532149 CCDC141Q6ZP82 1450 aa17.65■□□□□ 0.42
CHD7-211ENST00000532149 MAST1Q9Y2H9 1570 aa17.65■□□□□ 0.42
CHD7-211ENST00000532149 TONSLQ96HA7 1378 aa17.65■□□□□ 0.42
CHD7-211ENST00000532149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.64■□□□□ 0.41
CHD7-211ENST00000532149 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.41
CHD7-211ENST00000532149 CDC42BPBQ9Y5S2 1711 aa17.64■□□□□ 0.41
CHD7-211ENST00000532149 PLCH2O75038 1416 aa17.64■□□□□ 0.41
CHD7-211ENST00000532149 C9orf84Q5VXU9 1444 aa17.64■□□□□ 0.41
CHD7-211ENST00000532149 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
CHD7-211ENST00000532149 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
CHD7-211ENST00000532149 MPHOSPH9Q99550 1183 aa17.63■□□□□ 0.41
CHD7-211ENST00000532149 ZNF777Q9ULD5 760 aaPredicted RBP17.63■□□□□ 0.41
CHD7-211ENST00000532149 MBD5Q9P267 1494 aa17.63■□□□□ 0.41
CHD7-211ENST00000532149 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
CHD7-211ENST00000532149 ARHGAP5Q13017 1502 aa17.61■□□□□ 0.41
CHD7-211ENST00000532149 ANKRD50Q9ULJ7 1429 aa17.6■□□□□ 0.41
CHD7-211ENST00000532149 SAMD9LQ8IVG5 1584 aa17.58■□□□□ 0.41
CHD7-211ENST00000532149 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
CHD7-211ENST00000532149 ATF5Q9Y2D1 282 aaPredicted RBP17.58■□□□□ 0.4
CHD7-211ENST00000532149 WDR7Q9Y4E6 1490 aa17.57■□□□□ 0.4
CHD7-211ENST00000532149 ZBTB22O15209 634 aa17.57■□□□□ 0.4
CHD7-211ENST00000532149 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
CHD7-211ENST00000532149 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
CHD7-211ENST00000532149 TTC37Q6PGP7 1564 aa17.56■□□□□ 0.4
CHD7-211ENST00000532149 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
CHD7-211ENST00000532149 PLXNC1O60486 1568 aa17.54■□□□□ 0.4
CHD7-211ENST00000532149 RTEL1-TNFRSF6BF6WH68 1400 aa17.54■□□□□ 0.4
CHD7-211ENST00000532149 POLA2Q14181 598 aa17.53■□□□□ 0.4
CHD7-211ENST00000532149 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
CHD7-211ENST00000532149 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
CHD7-211ENST00000532149 KDM6BO15054 1643 aa17.52■□□□□ 0.4
CHD7-211ENST00000532149 RPRD2Q5VT52 1461 aaKnown RBP17.51■□□□□ 0.39
CHD7-211ENST00000532149 ABCA9Q8IUA7 1624 aa17.51■□□□□ 0.39
CHD7-211ENST00000532149 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHD7-211ENST00000532149 DUOX2Q9NRD8 1548 aa17.49■□□□□ 0.39
CHD7-211ENST00000532149 SYCP2Q9BX26 1530 aa17.48■□□□□ 0.39
CHD7-211ENST00000532149 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
CHD7-211ENST00000532149 DENND4BO75064 1496 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms